Literature DB >> 30021109

Monitoring Unfolding of Titin I27 Single and Bi Domain with High-Pressure NMR Spectroscopy.

Isaline Herrada1, Philippe Barthe1, Marisa Vanheusden1, Karine DeGuillen1, Léa Mammri1, Stéphane Delbecq2, Felix Rico3, Christian Roumestand4.   

Abstract

A complete description of the pathways and mechanisms of protein folding requires a detailed structural and energetic characterization of the folding energy landscape. Simulations, when corroborated by experimental data yielding global information on the folding process, can provide this level of insight. Molecular dynamics (MD) has often been combined with force spectroscopy experiments to decipher the unfolding mechanism of titin immunoglobulin-like single or multidomain, the giant multimodular protein from sarcomeres, yielding information on the sequential events during titin unfolding under stretching. Here, we used high-pressure NMR to monitor the unfolding of titin I27 Ig-like single domain and tandem. Because this method brings residue-specific information on the folding process, it can provide quasiatomic details on this process without the help of MD simulations. Globally, the results of our high-pressure analysis are in agreement with previous results obtained by the combination of experimental measurements and MD simulation and/or protein engineering, although the intermediate folding state caused by the early detachment of the AB β-sheet, often reported in previous works based on MD or force spectroscopy, cannot be detected. On the other hand, the A'G parallel β-sheet of the β-sandwich has been confirmed as the Achilles heel of the three-dimensional scaffold: its disruption yields complete unfolding with very similar characteristics (free energy, unfolding volume, kinetics rate constants) for the two constructs.
Copyright © 2018 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2018        PMID: 30021109      PMCID: PMC6051020          DOI: 10.1016/j.bpj.2018.06.010

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  59 in total

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Journal:  Nat Struct Biol       Date:  2003-08

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Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2013-01-20       Impact factor: 9.795

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Authors:  Thomas Zacharchenko; Eleonore von Castelmur; Daniel J Rigden; Olga Mayans
Journal:  Biochem Soc Trans       Date:  2015-10       Impact factor: 5.407

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Authors:  Julien Roche; Mariano Dellarole; Jose A Caro; Ewelina Guca; Douglas R Norberto; Yinshan Yang; Angel E Garcia; Christian Roumestand; Bertrand García-Moreno; Catherine A Royer
Journal:  Biochemistry       Date:  2012-11-13       Impact factor: 3.162

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Authors:  Yang Shen; Frank Delaglio; Gabriel Cornilescu; Ad Bax
Journal:  J Biomol NMR       Date:  2009-06-23       Impact factor: 2.835

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  3 in total

1.  Folding of the Ig-Like Domain of the Dengue Virus Envelope Protein Analyzed by High-Hydrostatic-Pressure NMR at a Residue-Level Resolution.

Authors:  Tomonori Saotome; Maxime Doret; Manjiri Kulkarni; Yin-Shan Yang; Philippe Barthe; Yutaka Kuroda; Christian Roumestand
Journal:  Biomolecules       Date:  2019-07-26

Review 2.  Combining High-Pressure Perturbation with NMR Spectroscopy for a Structural and Dynamical Characterization of Protein Folding Pathways.

Authors:  Cécile Dubois; Isaline Herrada; Philippe Barthe; Christian Roumestand
Journal:  Molecules       Date:  2020-11-26       Impact factor: 4.411

3.  Pressure and Chemical Unfolding of an α-Helical Bundle Protein: The GH2 Domain of the Protein Adaptor GIPC1.

Authors:  Cécile Dubois; Vicente J Planelles-Herrero; Camille Tillatte-Tripodi; Stéphane Delbecq; Léa Mammri; Elena M Sirkia; Virginie Ropars; Christian Roumestand; Philippe Barthe
Journal:  Int J Mol Sci       Date:  2021-03-30       Impact factor: 5.923

  3 in total

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