Literature DB >> 25652029

RNAPro•SAL: a device for rapid and standardized collection of saliva RNA and proteins.

Samantha H Chiang1, Gerald A Thomas2, Wei Liao1, Tristan Grogan3, Robert L Buck2, Laurel Fuentes1, Maha Yakob1, Mary J Laughlin2, Chris Schafer1, Abu Nazmul-Hossain1, Fang Wei1, David Elashoff3, Paul D Slowey2, David T W Wong1.   

Abstract

The stabilization and processing of salivary transcriptome and proteome biomarkers is a critical challenge due to the ubiquitous nature of nucleases and proteases as well as the inherent instability of these biomarkers. Furthermore, extension of salivary transcriptome and proteome analysis to point-of-care and remote sites requires the availability of self-administered ambient temperature collection and storage tools. To address these challenges, a self-contained whole saliva collection and extraction system, RNAPro•SAL, has been developed that provides rapid ambient temperature collection along with concurrent processing and stabilization of extracellular RNA (exRNA) and proteins. The system was compared to the University of California, Los Angeles (UCLA) standard clinical collection process (standard operating procedure, SOP). Both systems measured total RNA and protein, and exRNA IL-8, glyceraldehyde 3-phosphate dehydrogenase (GAPDH), β-actin and ribosomal protein S9 (RPS9) by qPCR. Proteome analysis was measured by EIA analysis of interleukin-8 (IL-8), and β-actin, as well as total protein. Over 97% of viable cells were removed by both methods. The system compared favorably to the labor-intensive clinical SOP, which requires low-temperature collection and isolation, yielding samples with similar protein and exRNA recovery and stability.

Entities:  

Keywords:  ambient temperature; point-of-care settings; saliva diagnostic tool; salivary extracellular RNA; salivary protein

Mesh:

Substances:

Year:  2015        PMID: 25652029      PMCID: PMC4377224          DOI: 10.2144/000114254

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  15 in total

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2.  Prevalidation of salivary biomarkers for oral cancer detection.

Authors:  David Elashoff; Hui Zhou; Jean Reiss; Jianghua Wang; Hua Xiao; Bradley Henson; Shen Hu; Martha Arellano; Uttam Sinha; Anh Le; Diana Messadi; Marilene Wang; Vishad Nabili; Mark Lingen; Darly Morris; Timothy Randolph; Ziding Feng; David Akin; Dragana A Kastratovic; David Chia; Elliot Abemayor; David T W Wong
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2012-02-01       Impact factor: 4.254

3.  New saliva DNA collection method compared to buccal cell collection techniques for epidemiological studies.

Authors:  Nikki L Rogers; Shelley A Cole; Hao-Chang Lan; Aldo Crossa; Ellen W Demerath
Journal:  Am J Hum Biol       Date:  2007 May-Jun       Impact factor: 1.937

4.  Direct saliva transcriptome analysis.

Authors:  Yu-Hsiang Lee; Hui Zhou; Jean K Reiss; Xinmin Yan; Lei Zhang; David Chia; David T W Wong
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Authors:  Chang S Lau; David T W Wong
Journal:  PLoS One       Date:  2012-03-20       Impact factor: 3.240

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Authors:  Zsofia Nemoda; Maria Horvat-Gordon; Christine K Fortunato; Emilie K Beltzer; Jessica L Scholl; Douglas A Granger
Journal:  BMC Med Res Methodol       Date:  2011-12-19       Impact factor: 4.615

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Review 6.  Salivary Exosomes as Nanocarriers for Cancer Biomarker Delivery.

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10.  Proteomic Profile of Saliva in Parkinson's Disease Patients: A Proof of Concept Study.

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  10 in total

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