Literature DB >> 25530679

Gas-Assisted Annular Microsprayer for Sample Preparation for Time-Resolved Cryo-Electron Microscopy.

Zonghuan Lu1, David Barnard2, Tanvir R Shaikh3, Xing Meng2, Carmen A Mannella2, Aymen Yassin4, Rajendra Agrawal2, Terence Wagenknecht2, Toh-Ming Lu1.   

Abstract

Time-resolved cryo electron microscopy (TRCEM) has emerged as a powerful technique for transient structural characterization of isolated biomacromolecular complexes in their native state within the time scale of seconds to milliseconds. For TRCEM sample preparation, microfluidic device [9] has been demonstrated to be a promising approach to facilitate TRCEM biological sample preparation. It is capable of achieving rapidly aqueous sample mixing, controlled reaction incubation, and sample deposition on electron microscopy (EM) grids for rapid freezing. One of the critical challenges is to transfer samples to cryo-EM grids from the microfluidic device. By using microspraying method, the generated droplet size needs to be controlled to facilitate the thin ice film formation on the grid surface for efficient data collection, while not too thin to be dried out before freezing, i.e., optimized mean droplet size needs to be achieved. In this work, we developed a novel monolithic three dimensional (3D) annular gas-assisted microfluidic sprayer using 3D MEMS (MicroElectroMechanical System) fabrication techniques. The microsprayer demonstrated dense and consistent microsprays with average droplet size between 6-9 μm, which fulfilled the above droplet size requirement for TRCEM sample preparation. With droplet density of around 12-18 per grid window (window size is 58×58 μm), and the data collectible thin ice region of >50% total wetted area, we collected ~800-1000 high quality CCD micrographs in a 6-8 hour period of continuous effort. This level of output is comparable to what were routinely achieved using cryo-grids prepared by conventional blotting and manual data collection. In this case, weeks of data collection process with the previous device [9] has shortened to a day or two. And hundreds of microliter of valuable sample consumption can be reduced to only a small fraction.

Entities:  

Keywords:  Microfluidics; cryo EM; microdroplet; micronozzle; microspray; monolithic device; time-resolved TEM

Year:  2014        PMID: 25530679      PMCID: PMC4266110          DOI: 10.1088/0960-1317/24/11/115001

Source DB:  PubMed          Journal:  J Micromech Microeng        ISSN: 0960-1317            Impact factor:   1.881


  13 in total

1.  Preparation of functional ribosomal complexes and effect of buffer conditions on tRNA positions observed by cryoelectron microscopy.

Authors:  G Blaha; U Stelzl; C M Spahn; R K Agrawal; J Frank; K H Nierhaus
Journal:  Methods Enzymol       Date:  2000       Impact factor: 1.600

2.  Correlations to predict droplet size in ultrasonic atomisation.

Authors:  R Rajan; A B Pandit
Journal:  Ultrasonics       Date:  2001-06       Impact factor: 2.890

3.  A second generation apparatus for time-resolved electron cryo-microscopy using stepper motors and electrospray.

Authors:  H D White; K Thirumurugan; M L Walker; J Trinick
Journal:  J Struct Biol       Date:  2003 Oct-Nov       Impact factor: 2.867

4.  Time-resolved cryo-electron microscopic study of the dissociation of actomyosin induced by photolysis of photolabile nucleotides.

Authors:  J F Ménétret; W Hofmann; R R Schröder; G Rapp; R S Goody
Journal:  J Mol Biol       Date:  1991-05-20       Impact factor: 5.469

5.  Microfabricated monolithic multinozzle emitters for nanoelectrospray mass spectrometry.

Authors:  Woong Kim; Mingquan Guo; Peidong Yang; Daojing Wang
Journal:  Anal Chem       Date:  2007-04-20       Impact factor: 6.986

6.  A computer-controlled spraying-freezing apparatus for millisecond time-resolution electron cryomicroscopy.

Authors:  H D White; M L Walker; J Trinick
Journal:  J Struct Biol       Date:  1998       Impact factor: 2.867

7.  Analysis of transient structures by cryo-microscopy combined with rapid mixing of spray droplets.

Authors:  J Berriman; N Unwin
Journal:  Ultramicroscopy       Date:  1994-12       Impact factor: 2.689

8.  Acetylcholine receptor channel imaged in the open state.

Authors:  N Unwin
Journal:  Nature       Date:  1995-01-05       Impact factor: 49.962

9.  Proton translocation by bacteriorhodopsin in the absence of substantial conformational changes.

Authors:  J Tittor; S Paula; S Subramaniam; J Heberle; R Henderson; D Oesterhelt
Journal:  J Mol Biol       Date:  2002-05-31       Impact factor: 5.469

10.  Monolithic microfluidic mixing-spraying devices for time-resolved cryo-electron microscopy.

Authors:  Zonghuan Lu; Tanvir R Shaikh; David Barnard; Xing Meng; Hisham Mohamed; Aymen Yassin; Carmen A Mannella; Rajendra K Agrawal; Toh-Ming Lu; Terence Wagenknecht
Journal:  J Struct Biol       Date:  2009-08-14       Impact factor: 2.867

View more
  10 in total

Review 1.  Two promising future developments of cryo-EM: capturing short-lived states and mapping a continuum of states of a macromolecule.

Authors:  Bo Chen; Joachim Frank
Journal:  Microscopy (Oxf)       Date:  2015-10-31       Impact factor: 1.571

Review 2.  Never at rest: insights into the conformational dynamics of ion channels from cryo-electron microscopy.

Authors:  Carus Lau; Mark J Hunter; Alastair Stewart; Eduardo Perozo; Jamie I Vandenberg
Journal:  J Physiol       Date:  2018-03-05       Impact factor: 5.182

Review 3.  Biological Applications at the Cutting Edge of Cryo-Electron Microscopy.

Authors:  Rebecca S Dillard; Cheri M Hampton; Joshua D Strauss; Zunlong Ke; Deanna Altomara; Ricardo C Guerrero-Ferreira; Gabriella Kiss; Elizabeth R Wright
Journal:  Microsc Microanal       Date:  2018-08       Impact factor: 4.127

Review 4.  Electron microscopy of cardiac 3D nanodynamics: form, function, future.

Authors:  Peter Kohl; Joachim Greiner; Eva A Rog-Zielinska
Journal:  Nat Rev Cardiol       Date:  2022-04-08       Impact factor: 49.421

5.  Interfacing Microfluidics with Negative Stain Transmission Electron Microscopy.

Authors:  Nikita Mukhitov; John M Spear; Scott M Stagg; Michael G Roper
Journal:  Anal Chem       Date:  2015-12-21       Impact factor: 6.986

6.  A Fast and Effective Microfluidic Spraying-Plunging Method for High-Resolution Single-Particle Cryo-EM.

Authors:  Xiangsong Feng; Ziao Fu; Sandip Kaledhonkar; Yuan Jia; Binita Shah; Amy Jin; Zheng Liu; Ming Sun; Bo Chen; Robert A Grassucci; Yukun Ren; Hongyuan Jiang; Joachim Frank; Qiao Lin
Journal:  Structure       Date:  2017-03-09       Impact factor: 5.006

7.  Sample deposition onto cryo-EM grids: from sprays to jets and back.

Authors:  David P Klebl; Diana C F Monteiro; Dimitrios Kontziampasis; Florian Kopf; Frank Sobott; Howard D White; Martin Trebbin; Stephen P Muench
Journal:  Acta Crystallogr D Struct Biol       Date:  2020-03-25       Impact factor: 7.652

8.  An open interface in the pre-80S ribosome coordinated by ribosome assembly factors Tsr1 and Dim1 enables temporal regulation of Fap7.

Authors:  Jay Rai; Melissa D Parker; Haina Huang; Stefan Choy; Homa Ghalei; Matthew C Johnson; Katrin Karbstein; M Elizabeth Stroupe
Journal:  RNA       Date:  2020-11-20       Impact factor: 4.942

Review 9.  Interfacing microfluidics with information-rich detection systems for cells, bioparticles, and molecules.

Authors:  Jared P Smithers; Mark A Hayes
Journal:  Anal Bioanal Chem       Date:  2022-04-07       Impact factor: 4.478

Review 10.  Structural dynamics: review of time-resolved cryo-EM.

Authors:  Märt Erik Mäeots; Radoslav I Enchev
Journal:  Acta Crystallogr D Struct Biol       Date:  2022-07-21       Impact factor: 5.699

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.