Literature DB >> 25438305

Graph-Based Airway Tree Reconstruction From Chest CT Scans: Evaluation of Different Features on Five Cohorts.

Christian Bauer, Michael Eberlein, Reinhard R Beichel.   

Abstract

We present a graph-based framework for airway tree reconstruction from computerized tomography (CT) scans and evaluate the performance of different feature categories and their combinations on five lung cohorts. The approach consists of two main processing steps. First, potential airway branch and connection candidates are identified and represented by a graph structure with weighted nodes and edges, respectively. Second, an optimization algorithm is utilized for generating an airway detection result by selecting a subset of airway branches and connections based on graph weights derived from image features. The performance of the algorithm with different feature categories and their combinations was assessed on a set of 50 lung CT scans from five different cohorts, including normal and diseased lungs. Results show trade-offs between feature categories/combinations in terms of correctly (true positive) and incorrectly (false positive) identified airways. Also, the performance of features in dependence of lung cohort was analyzed. Across all cohorts, a good trade-off with high true positive rate (TPR) and low false positive rate (FPR) was achieved by a combination of gray-value, local shape, and structural features. This combination enabled extracting 91.80% of reference airways (TPR) in combination with a low FPR of 1.00%. In addition, this variant was evaluated on the public EXACT'09 test set, and a comparison with other airway detection approaches is provided. One of the main advantages of the presented method is that it is robust against local disturbances/artifacts or other ambiguities that are frequently occurring in lung CT scans.

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Year:  2014        PMID: 25438305      PMCID: PMC4417425          DOI: 10.1109/TMI.2014.2374615

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  12 in total

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3.  Robust 3-D airway tree segmentation for image-guided peripheral bronchoscopy.

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Journal:  IEEE Trans Med Imaging       Date:  2004-11       Impact factor: 10.048

5.  Automated classification of lung bronchovascular anatomy in CT using AdaBoost.

Authors:  Robert A Ochs; Jonathan G Goldin; Fereidoun Abtin; Hyun J Kim; Kathleen Brown; Poonam Batra; Donald Roback; Michael F McNitt-Gray; Matthew S Brown
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Review 7.  CT based computerized identification and analysis of human airways: a review.

Authors:  Jiantao Pu; Suicheng Gu; Shusen Liu; Shaocheng Zhu; David Wilson; Jill M Siegfried; David Gur
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8.  Segmentation of interwoven 3d tubular tree structures utilizing shape priors and graph cuts.

Authors:  Christian Bauer; Thomas Pock; Erich Sorantin; Horst Bischof; Reinhard Beichel
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9.  Extraction of airways from CT (EXACT'09).

Authors:  Pechin Lo; Bram van Ginneken; Joseph M Reinhardt; Tarunashree Yavarna; Pim A de Jong; Benjamin Irving; Catalin Fetita; Margarete Ortner; Rômulo Pinho; Jan Sijbers; Marco Feuerstein; Anna Fabijańska; Christian Bauer; Reinhard Beichel; Carlos S Mendoza; Rafael Wiemker; Jaesung Lee; Anthony P Reeves; Silvia Born; Oliver Weinheimer; Eva M van Rikxoort; Juerg Tschirren; Ken Mori; Benjamin Odry; David P Naidich; Ieneke Hartmann; Eric A Hoffman; Mathias Prokop; Jesper H Pedersen; Marleen de Bruijne
Journal:  IEEE Trans Med Imaging       Date:  2012-07-26       Impact factor: 10.048

10.  Optimal graph search based segmentation of airway tree double surfaces across bifurcations.

Authors:  Xiaomin Liu; Danny Z Chen; Merryn H Tawhai; Xiaodong Wu; Eric A Hoffman; Milan Sonka
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  7 in total

1.  Hybrid Airway Segmentation Using Multi-Scale Tubular Structure Filters and Texture Analysis on 3D Chest CT Scans.

Authors:  Minho Lee; June-Goo Lee; Namkug Kim; Joon Beom Seo; Sang Min Lee
Journal:  J Digit Imaging       Date:  2019-10       Impact factor: 4.056

2.  Segmentation of distal airways using structural analysis.

Authors:  Debora Gil; Carles Sanchez; Agnes Borras; Marta Diez-Ferrer; Antoni Rosell
Journal:  PLoS One       Date:  2019-12-19       Impact factor: 3.240

3.  Airway tree reconstruction in expiration chest CT scans facilitated by information transfer from corresponding inspiration scans.

Authors:  Christian Bauer; Michael Eberlein; Reinhard R Beichel
Journal:  Med Phys       Date:  2016-03       Impact factor: 4.071

4.  Chest wall strapping increases expiratory airflow and detectable airway segments in computer tomographic scans of normal and obstructed lungs.

Authors:  Hisham Taher; Christian Bauer; Eric Abston; David W Kaczka; Surya P Bhatt; Joseph Zabner; Roy G Brower; Reinhard R Beichel; Michael Eberlein
Journal:  J Appl Physiol (1985)       Date:  2018-01-04

5.  An approach for reducing the error rate in automated lung segmentation.

Authors:  Gurman Gill; Reinhard R Beichel
Journal:  Comput Biol Med       Date:  2016-06-29       Impact factor: 4.589

6.  Lung Segmentation in 4D CT Volumes Based on Robust Active Shape Model Matching.

Authors:  Gurman Gill; Reinhard R Beichel
Journal:  Int J Biomed Imaging       Date:  2015-10-08

7.  Higher BMI is associated with higher expiratory airflow normalised for lung volume (FEF25-75/FVC) in COPD.

Authors:  Eric Abston; Alejandro Comellas; Robert Michael Reed; Victor Kim; Robert A Wise; Roy Brower; Spyridon Fortis; Reinhard Beichel; Surya Bhatt; Joseph Zabner; John Newell; Eric A Hoffman; Michael Eberlein
Journal:  BMJ Open Respir Res       Date:  2017-10-13
  7 in total

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