Literature DB >> 17482500

Automated classification of lung bronchovascular anatomy in CT using AdaBoost.

Robert A Ochs1, Jonathan G Goldin, Fereidoun Abtin, Hyun J Kim, Kathleen Brown, Poonam Batra, Donald Roback, Michael F McNitt-Gray, Matthew S Brown.   

Abstract

Lung CAD systems require the ability to classify a variety of pulmonary structures as part of the diagnostic process. The purpose of this work was to develop a methodology for fully automated voxel-by-voxel classification of airways, fissures, nodules, and vessels from chest CT images using a single feature set and classification method. Twenty-nine thin section CT scans were obtained from the Lung Image Database Consortium (LIDC). Multiple radiologists labeled voxels corresponding to the following structures: airways (trachea to 6th generation), major and minor lobar fissures, nodules, and vessels (hilum to peripheral), and normal lung parenchyma. The labeled data was used in conjunction with a supervised machine learning approach (AdaBoost) to train a set of ensemble classifiers. Each ensemble classifier was trained to detect voxels part of a specific structure (either airway, fissure, nodule, vessel, or parenchyma). The feature set consisted of voxel attenuation and a small number of features based on the eigenvalues of the Hessian matrix (used to differentiate structures by shape). When each ensemble classifier was composed of 20 weak classifiers, the AUC values for the airway, fissure, nodule, vessel, and parenchyma classifiers were 0.984+/-0.011, 0.949+/-0.009, 0.945+/-0.018, 0.953+/-0.016, and 0.931+/-0.015, respectively. The strong results suggest that this could be an effective input to higher-level anatomical based segmentation models with the potential to improve CAD performance.

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Year:  2007        PMID: 17482500      PMCID: PMC2041873          DOI: 10.1016/j.media.2007.03.004

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  8 in total

1.  Three-dimensional multi-scale line filter for segmentation and visualization of curvilinear structures in medical images.

Authors:  Y Sato; S Nakajima; N Shiraga; H Atsumi; S Yoshida; T Koller; G Gerig; R Kikinis
Journal:  Med Image Anal       Date:  1998-06       Impact factor: 8.545

2.  Automated detection of lung nodules in CT scans: preliminary results.

Authors:  S G Armato; M L Giger; H MacMahon
Journal:  Med Phys       Date:  2001-08       Impact factor: 4.071

3.  Lung micronodules: automated method for detection at thin-section CT--initial experience.

Authors:  Matthew S Brown; Jonathan G Goldin; Robert D Suh; Michael F McNitt-Gray; James W Sayre; Denise R Aberle
Journal:  Radiology       Date:  2003-01       Impact factor: 11.105

4.  Atlas-driven lung lobe segmentation in volumetric X-ray CT images.

Authors:  Li Zhang; Eric A Hoffman; Joseph M Reinhardt
Journal:  IEEE Trans Med Imaging       Date:  2006-01       Impact factor: 10.048

5.  Vessel tree reconstruction in thoracic CT scans with application to nodule detection.

Authors:  Gady Agam; Samuel G Armato; Changhua Wu
Journal:  IEEE Trans Med Imaging       Date:  2005-04       Impact factor: 10.048

6.  Segmentation of intrathoracic airway trees: a fuzzy logic approach.

Authors:  W Park; E A Hoffman; M Sonka
Journal:  IEEE Trans Med Imaging       Date:  1998-08       Impact factor: 10.048

Review 7.  Deformable models in medical image analysis: a survey.

Authors:  T McInerney; D Terzopoulos
Journal:  Med Image Anal       Date:  1996-06       Impact factor: 8.545

8.  Method for segmenting chest CT image data using an anatomical model: preliminary results.

Authors:  M S Brown; M F McNitt-Gray; N J Mankovich; J G Goldin; J Hiller; L S Wilson; D R Aberle
Journal:  IEEE Trans Med Imaging       Date:  1997-12       Impact factor: 10.048

  8 in total
  13 in total

1.  Computerized comprehensive data analysis of lung imaging database consortium (LIDC).

Authors:  Jun Tan; Jiantao Pu; Bin Zheng; Xingwei Wang; Joseph K Leader
Journal:  Med Phys       Date:  2010-07       Impact factor: 4.071

2.  Prediction of interaction between small molecule and enzyme using AdaBoost.

Authors:  Bing Niu; Yuhuan Jin; Lin Lu; Kaiyan Fen; Lei Gu; Zhisong He; Wencong Lu; Yixue Li; Yudong Cai
Journal:  Mol Divers       Date:  2009-02-14       Impact factor: 2.943

3.  Graph-Based Airway Tree Reconstruction From Chest CT Scans: Evaluation of Different Features on Five Cohorts.

Authors:  Christian Bauer; Michael Eberlein; Reinhard R Beichel
Journal:  IEEE Trans Med Imaging       Date:  2014-11-25       Impact factor: 10.048

4.  Shape and texture based novel features for automated juxtapleural nodule detection in lung CTs.

Authors:  Erdal Taşcı; Aybars Uğur
Journal:  J Med Syst       Date:  2015-03-03       Impact factor: 4.460

5.  A computer-aided diagnosis system for quantitative scoring of extent of lung fibrosis in scleroderma patients.

Authors:  H G Kim; D P Tashkin; P J Clements; G Li; M S Brown; R Elashoff; D W Gjertson; F Abtin; D A Lynch; D C Strollo; J G Goldin
Journal:  Clin Exp Rheumatol       Date:  2010-11-03       Impact factor: 4.473

Review 6.  Machine learning and radiology.

Authors:  Shijun Wang; Ronald M Summers
Journal:  Med Image Anal       Date:  2012-02-23       Impact factor: 8.545

7.  Learning with distribution of optimized features for recognizing common CT imaging signs of lung diseases.

Authors:  Ling Ma; Xiabi Liu; Baowei Fei
Journal:  Phys Med Biol       Date:  2016-12-29       Impact factor: 3.609

8.  Computer-aided detection of endobronchial valves using volumetric CT.

Authors:  Robert A Ochs; Fereidoun Abtin; Raffi Ghurabi; Ajay Rao; Shama Ahmad; Matthew Brown; Jonathan G Goldin
Journal:  Acad Radiol       Date:  2009-02       Impact factor: 3.173

9.  Computer-aided lung nodule recognition by SVM classifier based on combination of random undersampling and SMOTE.

Authors:  Yuan Sui; Ying Wei; Dazhe Zhao
Journal:  Comput Math Methods Med       Date:  2015-04-06       Impact factor: 2.238

10.  Automated ventricular systems segmentation in brain CT images by combining low-level segmentation and high-level template matching.

Authors:  Wenan Chen; Rebecca Smith; Soo-Yeon Ji; Kevin R Ward; Kayvan Najarian
Journal:  BMC Med Inform Decis Mak       Date:  2009-11-03       Impact factor: 2.796

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