Literature DB >> 27447897

An approach for reducing the error rate in automated lung segmentation.

Gurman Gill1, Reinhard R Beichel2.   

Abstract

Robust lung segmentation is challenging, especially when tens of thousands of lung CT scans need to be processed, as required by large multi-center studies. The goal of this work was to develop and assess a method for the fusion of segmentation results from two different methods to generate lung segmentations that have a lower failure rate than individual input segmentations. As basis for the fusion approach, lung segmentations generated with a region growing and model-based approach were utilized. The fusion result was generated by comparing input segmentations and selectively combining them using a trained classification system. The method was evaluated on a diverse set of 204 CT scans of normal and diseased lungs. The fusion approach resulted in a Dice coefficient of 0.9855±0.0106 and showed a statistically significant improvement compared to both input segmentation methods. In addition, the failure rate at different segmentation accuracy levels was assessed. For example, when requiring that lung segmentations must have a Dice coefficient of better than 0.97, the fusion approach had a failure rate of 6.13%. In contrast, the failure rate for region growing and model-based methods was 18.14% and 15.69%, respectively. Therefore, the proposed method improves the quality of the lung segmentations, which is important for subsequent quantitative analysis of lungs. Also, to enable a comparison with other methods, results on the LOLA11 challenge test set are reported.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Classification; Computed tomography; Lung segmentation; Segmentation fusion

Mesh:

Year:  2016        PMID: 27447897      PMCID: PMC5007179          DOI: 10.1016/j.compbiomed.2016.06.022

Source DB:  PubMed          Journal:  Comput Biol Med        ISSN: 0010-4825            Impact factor:   4.589


  15 in total

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2.  Shape "break-and-repair" strategy and its application to automated medical image segmentation.

Authors:  Jiantao Pu; David S Paik; Xin Meng; Justus E Roos; Geoffrey D Rubin
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3.  Toward automated segmentation of the pathological lung in CT.

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4.  A generic approach to pathological lung segmentation.

Authors:  Awais Mansoor; Ulas Bagci; Ziyue Xu; Brent Foster; Kenneth N Olivier; Jason M Elinoff; Anthony F Suffredini; Jayaram K Udupa; Daniel J Mollura
Journal:  IEEE Trans Med Imaging       Date:  2014-07-08       Impact factor: 10.048

5.  Graph-Based Airway Tree Reconstruction From Chest CT Scans: Evaluation of Different Features on Five Cohorts.

Authors:  Christian Bauer; Michael Eberlein; Reinhard R Beichel
Journal:  IEEE Trans Med Imaging       Date:  2014-11-25       Impact factor: 10.048

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7.  An alternative method for significance testing of waveform difference potentials.

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8.  Pleural effusion: characterization with CT attenuation values and CT appearance.

Authors:  Yigal Abramowitz; Natalia Simanovsky; Michael S Goldstein; Nurith Hiller
Journal:  AJR Am J Roentgenol       Date:  2009-03       Impact factor: 3.959

9.  Automated segmentation of lungs with severe interstitial lung disease in CT.

Authors:  Jiahui Wang; Feng Li; Qiang Li
Journal:  Med Phys       Date:  2009-10       Impact factor: 4.071

10.  Robust Initialization of Active Shape Models for Lung Segmentation in CT Scans: A Feature-Based Atlas Approach.

Authors:  Gurman Gill; Matthew Toews; Reinhard R Beichel
Journal:  Int J Biomed Imaging       Date:  2014-10-21
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  7 in total

1.  Automated Segmentation of Tissues Using CT and MRI: A Systematic Review.

Authors:  Leon Lenchik; Laura Heacock; Ashley A Weaver; Robert D Boutin; Tessa S Cook; Jason Itri; Christopher G Filippi; Rao P Gullapalli; James Lee; Marianna Zagurovskaya; Tara Retson; Kendra Godwin; Joey Nicholson; Ponnada A Narayana
Journal:  Acad Radiol       Date:  2019-08-10       Impact factor: 3.173

2.  Pulmonary lobe separation in expiration chest CT scans based on subject-specific priors derived from inspiration scans.

Authors:  Christian Bauer; Michael Eberlein; Reinhard R Beichel
Journal:  J Med Imaging (Bellingham)       Date:  2018-02-09

3.  Chest wall strapping increases expiratory airflow and detectable airway segments in computer tomographic scans of normal and obstructed lungs.

Authors:  Hisham Taher; Christian Bauer; Eric Abston; David W Kaczka; Surya P Bhatt; Joseph Zabner; Roy G Brower; Reinhard R Beichel; Michael Eberlein
Journal:  J Appl Physiol (1985)       Date:  2018-01-04

4.  Effective and Reliable Framework for Lung Nodules Detection from CT Scan Images.

Authors:  Sajid Ali Khan; Shariq Hussain; Shunkun Yang; Khalid Iqbal
Journal:  Sci Rep       Date:  2019-03-21       Impact factor: 4.379

5.  Lung Volume Calculation in Preclinical MicroCT: A Fast Geometrical Approach.

Authors:  Juan Antonio Camara; Anna Pujol; Juan Jose Jimenez; Jaime Donate; Marina Ferrer; Greetje Vande Velde
Journal:  J Imaging       Date:  2022-07-22

6.  Quantitative CT-based image registration metrics provide different ventilation and lung motion patterns in prone and supine positions in healthy subjects.

Authors:  Kyung Min Shin; Jiwoong Choi; Kum Ju Chae; Gong Yong Jin; Ali Eskandari; Eric A Hoffman; Chase Hall; Mario Castro; Chang Hyun Lee
Journal:  Respir Res       Date:  2020-10-02

Review 7.  Advances in medical imaging to evaluate acute respiratory distress syndrome.

Authors:  Shan Huang; Yuan-Cheng Wang; Shenghong Ju
Journal:  Chin J Acad Radiol       Date:  2021-07-17
  7 in total

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