In this study ultra performance liquid chromatography (UPLC) coupled to time-of-flight mass spectrometry in the MS(E) mode was used for rapid and comprehensive analysis of metabolites in the serum of mice exposed to internal exposure by Cesium-137 ((137)Cs). The effects of exposure to (137)Cs were studied at several time points after injection of (137)CsCl in mice. Over 1800 spectral features were detected in the serum of mice in positive and negative electrospray ionization modes combined. Detailed statistical analysis revealed that several metabolites associated with amino acid metabolism, fatty acid metabolism, and the TCA cycle were significantly perturbed in the serum of (137)Cs-exposed mice compared with that of control mice. While metabolites associated with the TCA cycle and glycolysis increased in their serum abundances, fatty acids such as linoleic acid and palmitic acid were detected at lower levels in serum after (137)Cs exposure. Furthermore, phosphatidylcholines (PCs) were among the most perturbed ions in the serum of (137)Cs-exposed mice. This is the first study on the effects of exposure by an internal emitter in serum using a UPLC-MS(E) approach. The results have put forth a panel of metabolites, which may serve as potential serum markers to (137)Cs exposure.
In this study ultra performance liquid chromatography (UPLC) coupled to time-of-flight mass spectrometry in the MS(E) mode was used for rapid and comprehensive analysis of metabolites in the serum of mice exposed to internal exposure by Cesium-137 ((137)Cs). The effects of exposure to (137)Cs were studied at several time points after injection of (137)CsCl in mice. Over 1800 spectral features were detected in the serum of mice in positive and negative electrospray ionization modes combined. Detailed statistical analysis revealed that several metabolites associated with amino acid metabolism, fatty acid metabolism, and the TCA cycle were significantly perturbed in the serum of (137)Cs-exposed mice compared with that of control mice. While metabolites associated with the TCA cycle and glycolysis increased in their serum abundances, fatty acids such as linoleic acid and palmitic acid were detected at lower levels in serum after (137)Cs exposure. Furthermore, phosphatidylcholines (PCs) were among the most perturbed ions in the serum of (137)Cs-exposed mice. This is the first study on the effects of exposure by an internal emitter in serum using a UPLC-MS(E) approach. The results have put forth a panel of metabolites, which may serve as potential serum markers to (137)Cs exposure.
Entities:
Keywords:
Cesium-137; UPLC−MSE; internal emitter; lipidomics; mass spectrometry; metabolomics; radiation
Exposure
to internal emitters such as cesium-137 is an inevitable
consequence of nuclear accidents, such as Chernobyl and Fukushima
Daiichi.[1] In addition to such large-scale
events, occupational and industrial exposure, as in the case of the
Goiania scrap metal incident or as in the case of a terrorist-plotted
radiological dispersal device, raise serious concerns. Because of
its environmental persistence and ease of dispersal, 137Cs poses a great health risk to the general public. Thus, our team
set out to develop early and robust markers for 137Cs exposure
in the easily obtainable biofluids, urine, and serum. Such exposure
markers can be used to screen and assess the risk of exposure in a
given population, which, in turn, may help triage the affected population
in a faster and more efficient manner.Many of the previous
ionizing radiation (IR) studies focused on
the DNA damage/repair machinery and its markers in biological samples.[2−4] Although such genomic and transcriptomic studies have helped bring
to light many facts about IR-induced injury and inflammation responses,
they are limited in scope and have failed to capture the molecular
and structural effects of IR in cells. Proteomics and more recently
metabolomics have filled this gap and contributed to the field of
biodosimetry by revealing the molecular targets of IR and their associated
signaling networks. Advances in technology, particularly in the field
of mass spectrometry, have enabled our laboratory to make significant
progress in determining even the slight and subtle changes in the
molecular composition, namely, the metabolome, of biofluids as a result
of exposure to external beam and internal emitters[5,6] using
mouse models.This study is complementary to our previous work
on the metabolic
perturbations in urine of C57/Bl6 mice over a 30-day period after
exposure to 137Cs, through employing the sensitivity of
time-of-flight mass spectrometry (TOFMS) coupled to high resolving
power of ultra performance liquid chromatography (UPLC).[6] Herein we utilized the same platform to determine
the unique and robust responses of serum metabolites to 137Cs exposure but in a new approach entailing a fast and simple lipid
profiling method with relative quantitation called MSE.
By using this method, we were able to not only identify several different
classes of lipids along with their relative abundances but also gain
structural information on these chemical species. Furthermore, we
utilized a comprehensive statistical analysis workflow we have specifically
developed for metabolomics, called MetaboLyzer, to determine 137Cs-specific perturbations in metabolites/lipids and their
respective pathways.[7] The statistically
significant metabolites and lipids were then compared with known external-beam
γ-irradiation markers to determine similarities and differences
in terms of responses to these two types of exposure.To date,
this is the first time that mass spectrometry has been
utilized to study the effects of exposure to an internal emitter in
serum of mice. The results of this study and other radiation-induced
signaling studies in easily accessible biofluids may help uncover
the mechanism behind IR-induced inflammation and injury, which will
ultimately lead to the discovery of novel biomarkers of IR exposure.
Materials
and Methods
Materials
The following fatty acids and lipid standards
were purchased from Avanti Polar lipids (Alabaster, AL): sphingolipid
mix (SM) II, phosphatidylethanolaminePE (14:0/14:0), phosphatidylcholinePC (14:0/14:0), phosphatidic acid PA (14:0/14:0), phosphatidylserine
PS (14:0/14:0), phosphatidylinositol PI (17:0/20:4), and lysophosphatidylcholineLPC (17:1). Prostaglandin standard and leukotriene were purchased
from Cayman Chemical (Ann Arbor, MI), and fatty acid standard FA(17:1)
was purchased from Nu-Chek Prep (Elysian, MN). Debrisoquine sulfate,
4-nitrobenzoic acid (4-NBA), and UPLC-grade solvents such as acetonitrile,
water, and isopropanol were purchased from Fisher Scientific (Hanover
Park, IL). Glucose, riboflavin, arachidonic acid, linoleic acid, oleic
acid, palmitic acid, hippuric acid, nicotinic acid, lactic acid, uridine,
taurine, α-ketobutyric acid, uric acid, hydroxyphenylpyruvic
acid, acetylcarnitine, and carnitine were purchased from Sigma-Aldrich
(Seelze, Germany). The tandem MS spectrum of dityrosine provided by
Hanft et al. was used as a validation reference spectrum.[8] In addition, the MS/MS spectra provided by Scripps
Center for Metabolomics, METLIN, (La Jolla, CA) were used as reference
spectra for hydroquinone, inositol, gentisic acid, and dihydrolipoamide.
METLIN was also used to putatively identify the ion at m/z of 337.1048 as the sodium adduct of 7,8-dihydropteroic
acid.
Animal Irradiation and Sample Collection
All animal
experiments were conducted in accordance with applicable federal and
state guidelines and were approved by the Institutional Animal Care
and Use Committee of the Lovelace Biomedical and Environmental Research
Institute (LBERI). C57Bl/6 mice (approximately 10–12 weeks
old, 25–30 g) were received from Charles River Laboratories
(Frederick, MD) and were quarantined for 14 days prior to group assignment
by body-weight stratification for randomization into the study.Animals were injected intraperitoneally with 8.0 ± 0.3 MBq 137CsCl solution in a volume of 50 μL. Nearly identical
biokinetics have been found following inhalation, intraperitoneal,
or intravenous administration of 137Cs, which was confirmed
in a pilot study comparison of the biokinetics between intravenous
and intraperitoneal administration in C57Bl/6 mice (unpublished results).
On the basis of these results, intraperitoneal administration was
chosen for the current study. After dose administration, mice were
housed individually in microisolator cages with lead shielding used
to minimize cross-irradiation from adjacent mice. All animals had
unlimited access to Teklad Certified Global Rodent Diet 2016 (Harlan
Teklad, Madison, WI) and water except during dose administration and
whole-body in vivo counting. Control mice gained weight steadily throughout
the study. Mice injected with 137CsCl initially lost weight,
then resumed weight gain at approximately the same rate as the unexposed
controls from day 3 after injection. No adverse effects were noted
on the animals during the course of the study. The absorbed doses
were calculated as previously described by Stabin et al.[9] using the RATDOSE software.[10] Serum was collected at necropsy by cardiac stick at 2,
3, 5, 20, and 30 days postinjection. Mice at each time point were
sacrificed as previously described.[6] Each
time point consists of eight mice per group with the exception of
day 2 and day 30 control mice with seven mice per group (Table 1).
Table 1
Cumulative Doses
and Average Body
Weights of Mice in Each Study Group
study group
collection
time (days)a
avg
cumulative
dose (Gy)
SDb
avg body
weight pre ± SD (kg)c
avg
body
weight post ± SD (kg)d
control
2
NA
NA
26.01 ± 1.39
26.40 ± 1.44
control
3
NA
NA
26.44 ± 1.18
27.18 ± 1.08
control
5
NA
NA
27.06 ± 1.63
28.43 ± 1.69
control
20
NA
NA
26.62 ± 1.02
30.32 ± 1.29
control
30
NA
NA
27.13 ± 0.33
32.59 ± 1.77
137Cs
2
1.95
0.11
26.02 ± 1.04
25.56 ± 1.06
137Cs
3
2.70
0.37
26.09 ± 1.30
24.90 ± 1.07
137Cs
5
4.14
0.35
26.41 ± 1.27
25.87 ± 1.20
137Cs
20
9.46
0.41
25.74 ± 0.89
27.06 ± 1.16
137Cs
30
9.91
1.20
25.65 ± 0.82
27.55 ± 0.88
Serum collection
time is indicated
as the number of days after treatment.
SD stands for standard deviation.
Average body weight of mice per
study group before treatment (pre) in kilograms.
Average body weight of mice per
study group after treatment (post) in kilograms.
Serum collection
time is indicated
as the number of days after treatment.SD stands for standard deviation.Average body weight of mice per
study group before treatment (pre) in kilograms.Average body weight of mice per
study group after treatment (post) in kilograms.
Sample Preparation for Mass Spectrometry
Analysis
Serum
samples were prepared by adding one part serum to four parts of a
chilled chloroform and methanol mixture (2:1 v/v) containing nonendogenous
metabolite and lipid standards in a sterile siliconized tube. The
list of nonendogenous internal standards along with their concentrations
used in this experiment can be found in Supplementary
Table 1 in the Supporting Information. Each sample was then
vortexed vigorously for 30 s at room temperature followed by centrifugation
at 13 000g for 5 min to separate the polar and nonpolar species
into two phases. The upper aqueous phase containing primarily polar
metabolites was collected, dried in a vacuum to <10 μL, and
resuspended in 50 μL of 50% acetonitrile. The lower phase was
also collected, dried under a gentle stream of nitrogen, and resuspended
in 50 μL of a isopropanol and 50% acetonitrile mixture (1:1
v/v). To establish appropriate standard curves for the lipid internal
standards, we carried out a series of two-fold dilutions at the initial
concentration of 350 μg/mL to the final concentration of 2 μg/mL
for phosphatidylcholine 14:0/14:0 (PC 14:0/14:0), phosphatidylethanolamine
14:0/14:0 (PE 14:0/14:0), phosphatidylglycerol d4PGE2 (PG d4PGE2), and sphingolipid mix II
(SM mix II). The concentration range for lysophosphatidylcholine 17:1
(LPC 17:1) and fatty acid 17:1 (FA 17:1) internal standards was at
128 to 1 μg/mL. The internal standards were also spiked into
pooled control serum samples and processed via UPLC–MS at every
seven injection intervals. These nonendogenous internal standards
were quickly identified based on their unique mass, retention time,
and fragmentation profiles. The calculated standard curve for each
internal standard was then used to determine the relative abundance
of different classes of lipids in each ionization mode.
Mass Spectrometry
Analysis
The metabolomic analysis
was performed by injecting 2 μL of aliquot of each sample into
a reverse-phase 50 × 2.1 mm H-class UPLC Acquity 1.7-μM
BEH C18 column (Waters Corp, Milford, MA) coupled to a time-of-flight
mass spectrometry (TOFMS). The mobile phase consisted of water and
0.1% formic acid (solvent A), 100% acetonitrile (solvent B). The gradient
for the metabolomic analysis switched from 98% aqueous solvent A to
40% solvent A and 60% solvent B after 4 min and to 98% solvent B at
8 min for 1 min and back to 98% solvent A for the last 2 min of the
11 min gradient at a flow rate of 0.5 mL/min. The Xevo G2-S mass spectrometer
(Waters) was operated in both MS and MSE modes scanning
a 50–1200 m/z range with
low collision energy of 10.0 eV for the precursor ions and collision
energy ramp of 10–50 eV for the product ions. The lipidomic
samples were injected into a CSH C18 column 150 μm × 100
mm (Waters) with the H-class UPLC Acquity. The solvents used for the
lipidomic analysis were 50% acetonitrile with 0.1% formic acid and
10 mM ammonium formate (solvent C) and isopropanol/acetonitrile (90:10
v:v) with 10 mM ammonium formate (solvent D).The gradient started
with 60% solvent C at 0.45 mL/min for the initial 8 min, then switched
to 100% solvent D for 1 min, and back to 60% solvent C for the remaining
2 min of the 11 min long gradient. The Xevo G2-S QTOF mass spectrometer
was operated in positive (ESI+) and negative (ESI–) electrospray ionization (ESI) modes over a mass range of 50 to
1200 Da in two channels, MS and MSE. The low energy MS
channel was operated at 10.0 eV of collision energy while the MSE channel included an energy ramp of 10–50 eV. The lock-spray
consisted of leucine–enkephalin (556.2771 [M + H]+ and 554.2615 [M-H]−). The MS data were acquired
in centroid mode and processed using MassLynx software (Waters) as
described later.
Statistical Analysis
As described
previously[5] MarkerLynx software (Waters)
was used to construct
a data matrix consisting of the retention time, m/z, and abundance value (via the normalized peak
area) for each ion using the raw MS chromatograms. To determine the
peak areas of internal standards, QuanLynx (Waters) was used. For
analyzing the MSE data, the high energy scans (fragments)
were aligned with low energy scans (precursors) in MarkerLynx. Our
in-house statistical analysis program, MetaboLyzer, was used to analyze
the data and identify statistically significant ions.[7] MetaboLyzer allowed for extraction of the ions with nonzero
abundance values, which were detected in at least 70% of samples in
each study group, called complete-presence ions. Data were then log-transformed
and analyzed for statistical significance via the nonparametric Mann–Whitney
U statistical hypothesis test (p value <0.05).
Statistical significance testing for ions with nonzero abundance values
in at least 70% of the samples in only one group (partial-presence
ions) were analyzed as categorical variables for presence status (i.e.,
nonzero abundance) via Fisher’s exact test (p value <0.05). The log-transformed data for statistically significant
complete-presence ions were then utilized for principal component
analysis (PCA) via singular value decomposition for the purpose of
data visualization
Metabolic Pathway Analysis
Statistically
significant
ions were putatively identified via MetaboLyzer, which utilizes the
Human Metabolome Database (HMDB), LipidMaps, and the Kyoto Encyclopedia
of Genes and Genomes (KEGG) database.[11] The m/z values were used to putatively
assign IDs to the ions by neutral mass elucidation, which was accomplished
by considering the possible adducts, H+, Na+, or NH4+ in the ESI+ mode and H– and Cl– in the ESI– mode. The masses were then compared with the exact mass of small
molecules in the databases, from which putative metabolites were identified
with a mass error of 20 ppm (ppm) or less. KEGG-annotated pathways
associated with these putative metabolites were also identified. To
extract structural information on the putative identities of the metabolite,
we explored MSE data via QuanLynx for alignment of the
low energy scans with high energy scans. The fragmentation pattern
of each metabolite and lipid of interest was compared against that
of its pure chemical form either in online databases or the in-house
database.
Results
In this study we utilized
the sensitivity of mass spectrometry
(Xevo-G2, Waters) to detect changes in the sera of mice exposed to 137Cs over the course of 30 days. The comprehensive analysis
of serum metabolites and lipids along with their relative abundances
were made possible by a feature of the Xevo-G2 called MSE, where many precursor, neutral loss, and product ion scans are acquired
for every injection. The acquired raw chromatograms were preprocessed
and subsequently analyzed via MetaboLyzer. We initially focused on
the overall metabolomic profiles of sera. More than 1800 spectral
features were detected in both ESI modes combined. These spectral
features were used to determine the changes in the serum metabolome
of mice after exposure to 137Cs at different time points/doses
(Table 1). For example, the overall serum metabolomic
profile of mice 2 days after 137CsCl injection at a cumulative
dose of 1.95 Gy showed significant changes when compared with the
serum metabolomic profile of matched control mice, as expected. This
is evident from the clear separation in PCA of Figure 1A, where 137Cs-exposed mice (red circles) are tightly
clustered and clearly dichotomized from the control mice (blue triangles).
The heatmap in Figure 1B shows a panel of putative
metabolites on the vertical axis, whose serum abundances change significantly
(p < 0.05) 2 days post-137Cs-exposure
and contributed the most to the separation seen in the PCA of Figure 1A. Each circle in the volcano plot of panel C represents
a putative metabolite, with the boxed red circles on the top half
representing those, which were statistically significantly perturbed
in the serum of 137Cs-exposed mice 2 days after exposure.
This initial statistical analysis using traditional tests was extended
to other time points/doses with similar results. To see how the overall
metabolomic profiles of all time points/doses compared, we used Random
Forests ranking on the entire metabolomic data set. The resulting
proximity-matrix-based MDS plot in Figure 1D shows that the overall metabolomic profile of serum from control
mice is clearly separated from that of 137Cs-exposed mice
at all time point/doses based on the top 100 ranked putative metabolite.
These 100 putative metabolite can be used to assign with 82% accuracy
any serum sample to its correct dose group based on its relative serum
abundance (data from ESI+ mode).
Figure 1
Comparative analysis
of serum metabolomic profiles of control mice
and those exposed to Cs at a cumulative
dose of 1.95 Gy at 2 days post-exposure. Panel A is a principle component
analysis (PCA) plot showing clear separation of metabolomic signatures
of sera from control (blue triangles) and 137Cs-exposed
mice (red circles). Panel B is a heatmap of metabolites whose serum
levels change significantly 2 days post-137Cs-exposure.
The top half of this heatmap displays metabolites whose levels in
serum dropped post-exposure and those of metabolites on the bottom
half increased post-exposure after 2 days. Panel C is a volcano plot,
which highlights many statistically significant metabolites post-exposure.
Statistical significance was determined via Mann–Whitney U
test (p value <0.05). Panel D is an MDS plot generated
in Random Forests showing the spatial separation between the overall
metabolomic profiles of serum samples from control mice and those
of serum samples from 137Cs-exposed mice at 2, 3, 5, 20,
and 30 days post-exposure. All of the figures were created using ESI+ data. Panels A–C were created in MetaboLyzer, while
panel D was generated in Random Forests.
Comparative analysis
of serum metabolomic profiles of control mice
and those exposed to Cs at a cumulative
dose of 1.95 Gy at 2 days post-exposure. Panel A is a principle component
analysis (PCA) plot showing clear separation of metabolomic signatures
of sera from control (blue triangles) and 137Cs-exposed
mice (red circles). Panel B is a heatmap of metabolites whose serum
levels change significantly 2 days post-137Cs-exposure.
The top half of this heatmap displays metabolites whose levels in
serum dropped post-exposure and those of metabolites on the bottom
half increased post-exposure after 2 days. Panel C is a volcano plot,
which highlights many statistically significant metabolites post-exposure.
Statistical significance was determined via Mann–Whitney U
test (p value <0.05). Panel D is an MDS plot generated
in Random Forests showing the spatial separation between the overall
metabolomic profiles of serum samples from control mice and those
of serum samples from 137Cs-exposed mice at 2, 3, 5, 20,
and 30 days post-exposure. All of the figures were created using ESI+ data. Panels A–C were created in MetaboLyzer, while
panel D was generated in Random Forests.After thorough analysis of the statistically significant
metabolites
from all of the time-points/doses we were able to group the metabolites
into several key pathways, such as riboflavin metabolism and linoleic
acid metabolism in ESI+ mode (Supplemental
Figure 1 in the Supporting Information ) and glycolysis, TCA
cycle, tyrosine, and phenylalanine metabolism in ESI– mode. The results of this analysis suggested that exposure to 137Cs caused an increase in the serum levels of metabolites
from these pathways particularly at earlier time points (day 3 and
day 5 post-exposure). Some metabolites’ levels dropped to their
pre-exposure levels after the initial increase at days 3 and 5, but
most metabolites showed a persistent increase in their response to 137Cs during the entire course of the study, as shown in Figure 2. For instance, two metabolites associated with
riboflavin pathway, hydroquinone, and riboflavin (reduced form), showed
increased serum levels post-exposure, particularly after 3 and 5 days
(cumulative doses of 2.70 and 4.14 Gy). The levels of these metabolites
remained elevated until 30 days post-exposure (the last time-point
in the study).
Figure 2
Changes in the serum abundances of selected metabolites
post 137Cs exposure are represented as the ratio of their
responses
in 137Cs-exposed mice to those in control mice. The responses
were calculated as the area under the peak for each metabolite in 137Cs-treated serum divided by that in control serum (Y axis). These metabolites were selected based on their
statistical significance as determined by Mann–Whitney U test
(p value <0.05) and biological importance. The
identities of these ions were validated via MS/MS against pure standards
or through MS/MS spectra published in online databases (METLIN[20] and HMDB). Tight clustering of fold-change values
for glucose and dityrosine is shown at each time point.
Changes in the serum abundances of selected metabolites
post 137Cs exposure are represented as the ratio of their
responses
in 137Cs-exposed mice to those in control mice. The responses
were calculated as the area under the peak for each metabolite in 137Cs-treated serum divided by that in control serum (Y axis). These metabolites were selected based on their
statistical significance as determined by Mann–Whitney U test
(p value <0.05) and biological importance. The
identities of these ions were validated via MS/MS against pure standards
or through MS/MS spectra published in online databases (METLIN[20] and HMDB). Tight clustering of fold-change values
for glucose and dityrosine is shown at each time point.Furthermore, the serum abundance of a few metabolites
associated
with energy metabolism was determined to be significantly attenuated
as a result of exposure to 137Cs. Lactic acid is an important
metabolite of energy metabolism, and changes in its levels may be
indicative of a change in energy supply and glycolytic flux.[12] The serum levels of this metabolite increased
as a result of exposure to 137Cs in the earlier time points
and returned to its pre-exposure levels by the end of the experiment
(day 30). Increased level of this metabolite is associated with increased
glycolysis and ROS production.[13] Interestingly,
we determined a similar increase in the levels of dityrosine, which
is a cross-linked species formed upon protein modification due to
ROS-induced damage. The rise in dityrosine levels during earlier time
points matched the increase in serum lactic acid during these time
points, which may suggest a link between these two metabolites and
internal emitter exposure-induced ROS damage. Additionally, glucose
level was determined to be elevated by almost two-fold in mice exposed
to 137Cs starting as early as 2 days post-exposure. Together
with an increase in serum levels of nicotinic acid, members of the
TCA cycle such as citrate, malate, and metabolites associated with
tyrosine and phenylalanine metabolism (Figure 2 and Table 2) may suggest an increase in the
rate of glycolysis. Taurine and uric acid listed in Table 2 have been reported in gamma irradiation studies
as potential markers of external beam exposure.[14,15] These metabolites were also found to be significantly perturbed
in the urine of 137Cs-exposed mice in this study.[6] Taurine shows a significant decrease in its serum
concentration post-137Cs-exposure, while its urinary abundance
was determined to increase in the same mice post-exposure. Uric acid
in the urine of these mice showed a late increased response, while
its serum levels suggest an early increase in response. Inositol is
yet another metabolite reported in literature as a potential serum
marker for gamma irradiation, whose increased response to radiation
in a dose-specific manner may indicate a perturbation in hepatic lipid
metabolism.[16] We determined that the serum
levels of this metabolite increased post 137Cs-exposure;
however, this persistent increase was not dose-specific and may suggest
a more systemic perturbation in lipid metabolism as a result of exposure
to an internal emitter.
Table 2
Examples of Statistically
Significant
Serum Metabolites along with the Fold Changes in Their Responses to 137Cs Exposure after 2, 3, 5, 20, and 30 Days (D) of Exposure
fold changea
ESI mode
ID
name
p value (Mann–Whitney U test)
D2
D3
D5
D20
D30
1
POS
203.0523_0.2908
inositol
4.40 × 10–3
1.30
1.19
1.29
1.70
1.26
2
POS
208.0821_2.1842
dihydrolipoamide
1.17 × 10–3
2.99
2.63
1.92
3.50
2.45
3
POS
337.1048_4.0617
7,8-dihydropteroic acidb
8.66 × 10–3
0.67
0.51
0.48
0.41
0.38
4
POS
245.0782_3.4928
uridine
4.33 × 10–3
0.53
0.42
0.38
0.28
0.70
5
NEG
124.0065_0.2973
taurine
2.33 × 10–3
0.55
0.46
0.67
0.75
0.87
6
NEG
101.0234_0.2805
2-ketobutyric acid
9.40 × 10–3
1.70
1.33
1.37
1.86
1.21
7
NEG
133.0134_0.3209
malic acid
2.53 × 10–3
0.88
0.98
1.53
1.87
1.25
8
NEG
167.0196_0.3154
uric acid
5.83 × 10–4
1.60
1.45
1.63
1.52
0.98
Fold change was
calculated by dividing
the relative concentration of a metabolite in post 137Cs
exposure serum samples by that in respective control samples.
Putative name was assigned based
on accurate mass matched to METLIN database (mass error <10 ppm).
Fold change was
calculated by dividing
the relative concentration of a metabolite in post 137Cs
exposure serum samples by that in respective control samples.Putative name was assigned based
on accurate mass matched to METLIN database (mass error <10 ppm).Our initial metabolomic analysis
of the data was followed by LC–MSE lipidomics. This
involved assigning the detected lipids to
their respective classes. Figure 3 demonstrates
how retention time window and specific fragments of lipid head groups
can be used to do just that. The use of lipid and fatty acid standards
in both ESI modes further facilitated their identification due to
the differences in preferential ionization of polar head groups. For
instance, in ESI+ mode, the phosphatidylcholine (PC) and
lysophosphatidylcholine (LPC) standards were used for identification
and relative quantification of lipids belonging to these classes,
while in ESI– mode (phosphatidylethanolamine (PE),
lysophosphatidylethanolamine (LPE), phosphatidylglycerol (PG), and
(fatty acid) FA were used. The two-fold serial dilutions established
linearity between peak area and concentration for the mentioned standards
(Supplemental Table 1 in the Supporting Information). More than 800 spectral features were detected in both ESI modes
combined, from which 48 were determined to be PCs, 12 SMs, 7 PEs,
15 LPCs, 2 LPEs, 3 FAs, and 1 PG. We were able to detect more PCs
than the other lipid species in this study. Among the PCs, the ion
at m/z of 758.5685 and retention
time of 5.95 min was determined to be the most statistically significant
PC. Figure 4 shows the low and high energy
scans for this PC with calculated fatty acid chains of 16 carbons
long and 18 carbons long with two double bonds. The cleavage of the
phospho-headgroup of PCs gives rise to a fragment at m/z of 184.0752, which can be used to search for
all PC and LPC classes of phospholipid along with SMs. To gain further
insight into the chemical structure of these lipids, we explored the
MSE data at high collision energy for identification of
other fragments of the precursor ion at the desired retention time.
For instance, for the precursor ion at m/z of 758.5685 and retention time of 5.95 min, the low and
high energy scans were aligned, and the fragments of the precursor
ion were identified. This lead to the identification of fragments
at m/z of 478.3211, which corresponds
to the loss of a 16 carbon long fatty acyl chain and a water molecule
from the precursor ion. The proposed sn2 reaction
that gave rise to the peak at m/z of 478.3211 is depicted in Figure 4 (ESI+ mode) along with a similar mechanism for the fragment at m/z of 520.3643. On the basis of these
fragments we identified the precursor ion at m/z of 758.5685 as PC(16:0/18:2), as shown in Figure 4. This demonstrates how LC–MSE data can be carefully mined to gain more structural information
on lipids in addition to assigning them to their respective classes.
A similar approach was taken to identify FAs and lipid species such
PEs and LPCs within their specified retention time window and mass
error window (<10 ppm). A few examples of lipids identified via
this approach are provided in Table 3.
Figure 3
UPLC–MSE low and high energy scans of various
classes of lipids in sera of mice. The low energy scan highlights
the specific retention time window for each class. The high energy
scan highlights a specific fragment at m/z of 184.0 that can be used to identify lipids with a phosphate
headgroup.
Figure 4
Base peak of a PC and its chemical structure
(top) along with its
MS/MS spectrum and identified fragments (bottom). The MS/MS spectrum
was obtained using described MSE method at high collision
energy in ESI+ mode. The low and high energy scans were
first aligned in the expected retention time window (A). The individual
fragments of the precursor ion were determined by mining the high
energy scan spectrum (B).
Table 3
Examples of Statistically Significant
Serum Lipids along with the Fold Changes in Their Responses to 137Cs Exposure after 2, 3, 5, 20, and 30 days (D) of Exposure
fold changeq
ESI mode
ID
lipid class
p value (Mann–Whitney U test)
D2
D3
D5
D20
D30
1
POS
758.5736_6.5062
PC
2.00 × 10–2
0.88
0.89
0.78
0.74
0.81
2
POS
780.5493_5.6732
PC
1.40 × 10–4
0.65
0.69
0.68
0.67
0.43
3
POS
518.3218_1.9790
LysoPC
5.89 × 10–3
1.03
3.96
3.69
4.03
4.12
4
POS
542.3215_1.6057
LysoPC
3.74 × 10–2
1.78
4.56
4.74
3.90
3.51
5
POS
496.3401_2.2871
LysoPC
2.60 × 10–2
1.80
2.31
2.16
2.07
2.66
6
POS
703.5717_5.5076
SM
4.12 × 10–2
1.66
2.00
1.94
1.79
1.15
7
POS
725.5578_6.1051
SM
1.75 × 10–02
3.21
4.74
5.12
4.77
5.02
8
NEG
722.5070_5.5520
PE
1.89 × 10–7
5.27
3.78
3.24
2.05
1.57
9
NEG
776.5450_6.4326
PE
7.04 × 10–5
3.12
4.28
2.46
1.59
1.23
10
NEG
476.2776_2.5595
LysoPE
8.29 × 10–5
0.36
0.69
0.73
0.74
0.89
11
NEG
387.2142_4.7629
PG
3.55 × 10–3
0.30
0.36
0.57
0.63
0.48
Fold change was
calculated by dividing
the relative concentration of a metabolite in post 137Cs
exposure serum samples by that in respective control samples.
UPLC–MSE low and high energy scans of various
classes of lipids in sera of mice. The low energy scan highlights
the specific retention time window for each class. The high energy
scan highlights a specific fragment at m/z of 184.0 that can be used to identify lipids with a phosphate
headgroup.Base peak of a PC and its chemical structure
(top) along with its
MS/MS spectrum and identified fragments (bottom). The MS/MS spectrum
was obtained using described MSE method at high collision
energy in ESI+ mode. The low and high energy scans were
first aligned in the expected retention time window (A). The individual
fragments of the precursor ion were determined by mining the high
energy scan spectrum (B).Fold change was
calculated by dividing
the relative concentration of a metabolite in post 137Cs
exposure serum samples by that in respective control samples.Statistical analysis on the identified
lipid species revealed that
the serum levels of PCs and LPCs were highly affected post-137Cs-exposure. PCs undergo hydrolysis of their acyl FA chains by the
actions of phospholipases (PL) A1 and A2 to
form LPCs. For instance, PC(36:4) with m/z of 782.5681 undergoes hydrolysis of its C20:4 acyl chain
with m/z of 305.3305 by the actions
of PLA2, resulting in the release of arachidonic acid (C20)
and LPC(16:0) with m/z of 478.3457,
as depicted in Figure 5A. Arachidonic acid
is a known inflammation marker and was determined to have elevated
serum levels post-Cs-exposure (Figure 5B).
The calculated ratio of LPC(16:0) peak area to the precursor PC(36:4)
peak area in the serum of Cs exposed mice showed an almost four-fold
increase when compared with the calculated ratio in the serum of control
mice (Figure 5B) as early as 3 days post-exposure
and continued to be elevated throughout the course of the study (Figure 5C). This along with elevated levels of arachidonic
acid in the serum of Cs-exposed mice suggests an increase in the activity
of PLA2 as a result of inflammatory response to 137Cs exposure. Arachidonic is further acted on by lipoxygenases to
form leukotrienes or by cyclogenases to form PGs and thromboxanes.
We identified leukotriene F4 to be elevated in the sera of 137Cs-exposed mice as expected (Figure 5D).
Figure 5
Ratio
of LPC(16:0) to PC(36:4) and the subsequent formation of
arachidonic acid and synthesis of leukotrienes are collectively a
measure of phospholipase 2 (LPA2) activity and are used to gauge the
level of inflammation. The data suggest an increase in the ratio of
LPC/PC, which corresponds to an increase seen in the post-Cs-exposure
serum levels of arachidonic acid and leukotrienes. An increase in
the formation of arachidonic acid via an sn-2 reaction
can serve as an inflammation marker. The error bars represent the
standard deviation values for each time point.
Ratio
of LPC(16:0) to PC(36:4) and the subsequent formation of
arachidonic acid and synthesis of leukotrienes are collectively a
measure of phospholipase 2 (LPA2) activity and are used to gauge the
level of inflammation. The data suggest an increase in the ratio of
LPC/PC, which corresponds to an increase seen in the post-Cs-exposure
serum levels of arachidonic acid and leukotrienes. An increase in
the formation of arachidonic acid via an sn-2 reaction
can serve as an inflammation marker. The error bars represent the
standard deviation values for each time point.In addition to the above phospholipids, we studied the serum
levels
of three fatty acids, linoleic, oleic, and palmitic acids, along with
acyl-carnitine and acetylcarnitine species. Fatty acids are important
sources of energy, and they are converted into acyl-CoA during β-oxidation
to be used in the TCA cycle. Our data suggest a slight decrease in
the serum levels of these three fatty acids post-137Cs-exposure,
accompanied by a decrease in the relative concentration of free carnitine
(Figure 6). However, the serum levels of acetylcarnitine
increase by 35% post 137Cs exposure, which may suggest
a decrease in β-oxidation. Together with our metabolomics data,
this indicates a shift in energy production from fatty acids oxidation
to glycolysis as a result of 137Cs exposure. It is important
to note that the urine metabolomics analysis on these mice revealed
opposite changes in the levels of TCA cycle metabolites and carnitine
species to what we observed in the serum.
Figure 6
Significant decrease
is observed in the serum abundances of fatty
acids: palmitic, linoleic, and oleic acid. As a crude measure of fatty
acid β-oxidation, the ratio of free carnitine to acetylcarnitine
was calculated (peak area ratio shown on y axis),
which also suggests a decrease in serum-free carnitine levels post-137Cs-exposure.
Significant decrease
is observed in the serum abundances of fatty
acids: palmitic, linoleic, and oleic acid. As a crude measure of fatty
acid β-oxidation, the ratio of free carnitine to acetylcarnitine
was calculated (peak area ratio shown on y axis),
which also suggests a decrease in serum-free carnitine levels post-137Cs-exposure.
Discussion
In this study, we focused on the changes in serum
metabolites and
lipids from mice exposed to an internal emitter, 137Cs,
which follows our previously published work in the urine of these
mice. Here we took advantage of an untargeted, data-independent, and
hybrid technology called MSE to rapidly yet comprehensively
analyze mouse serum samples after 2, 3, 5, 20, and 30 days of exposure
to 137Cs and gain insight into robust responses to 137Cs exposure. Recent metabolomic studies of serum from rats
and mice exposed to external gamma irradiation by gas chromatography
(GC)–TOFMS have indicated important changes in the serum levels
of amino acids such as serine and lysine, isocitrate, glycerol, stearic
acid, steroid hormones such as progesterone, and cholesterol.[16] These studies focused in particular on the volatile
small metabolites and steroid hormones via GC–TOFMS providing
a specific yet narrow window into metabolic changes in serum of the
animals post gamma irradiation. Studying the complex network of metabolites
and lipids and their exposure-specific responses is a monumental task
and cannot be covered in any single study; however, our LC–MSE approach can provide insight into a wider range of molecules,
from small polar metabolites to lipids, with relative quantification
in serum.As with previous gamma irradiation studies from external
sources,
we initially focused on the metabolomic data and the overall metabolomic
signature of serum from mice exposed to 137Cs compared
with that of serum from control mice. As expected, 137Cs
exposure significantly perturbed the levels of many serum metabolites
as determined by statistical testing (MetaboLyzer, Mann–Whitney
U-test p < 0.05) as early as 2 days post-exposure
at a cumulative dose of 1.95 Gy. The magnitude of change in the levels
of these metabolites was large enough to affect the differential metabolomic
profile of serum in the exposed mice. This is seen from the clear
separation of profiles in the PCA plot of Figure 1A. The heatmap and the volcano plot in Figure 1 highlight the specific 137Cs exposure responses
of selected metabolites at day 2 compared with their respective controls.
The metabolomic profile of serum from 137Cs-exposed mice
at all time-points/doses was clearly distinguishable from that of
their respective controls (Figure 1D). More
thorough exploration of the data indicates changes in the metabolites
associated with tyrosine metabolism, riboflavin metabolism, glycolysis,
and TCA cycle. Two of the TCA cycle metabolites were also found to
be significantly perturbed in the urine of these mice,[6] but in the opposite direction. For instance, urinary levels
of citrate and malate were found to have decreased, while in serum
their levels appeared elevated post-137Cs-exposure. A key
metabolite of glycine and serine metabolism, 2-ketobutyric acid, which
feeds into acetyl-CoA production, and TCA cycle was also found at
higher concentration post-137Cs-exposure throughout the
course of the study. This suggests an up-regulation of TCA cycle and
its feeder pathways in the serum of mice exposed to 137Cs. We additionally found that glucose serum levels in mice post 137Cs exposure were elevated while the average body weight
of mice in all of the study groups remained steady (Table 1). Thus, the increase in serum levels of glucose
and TCA cycle associate metabolites is a result of exposure to 137Cs and not food intake. The serum levels of uric acid appeared
elevated post exposure. This change is similar to what had been seen
in the urine of these mice and those exposed to gamma irradiation.[6,15] However, taurine was detected at lower concentration in the serum
of 137Cs-exposed mice, unlike what had been seen in the
urine of these mice and in the urine of mice exposed to gamma irradiation
at similar doses.[14]Inositol was
recently shown by Liu et al. to increase in the serum
of mice exposed to gamma irradiation in a dose–response manner.[16] We also found the levels of this metabolite
to be elevated in the serum of 137Cs-exposed mice. Inositol
serum levels remained elevated throughout the course of the study,
with the response being greatest at day 20 and decreasing to levels
at earlier time-points by day 30 (Table 2).
An increase in serum concentration of inositol is associated with
perturbation of lipid metabolism.Lipid and fatty acid metabolism
were further investigated in the
second phase of this study. The statistically significant lipids were
assigned to their respective classes using a shotgun approach LC–MSE method as previously described. We used the elution window
and alignment of low and high energy scans as shown in Figure 2 to do this. A few examples of lipids in each identified
class are shown in Table 3. The PCs were detected
at lower concentrations in the serum of 137Cs exposed mice,
while LPCs were found at elevated levels. We further investigated
the fragmentation pattern of a PC species at m/z of 782.5681. The phospho- headgroup of all PCs is cleaved
at high collision energy scan to give rise to a peak at m/z of 184. Furthermore, the sn1 and sn2 reactions
on the two fatty acyl chains of PCs give rise to distinct peaks corresponding
to the loss of each acyl chain. As for the high energy scan of PC
at 782.5681, two fragments were aligned with the low energy scan,
which corresponded to the loss of an acyl chain with 16 carbons and
no double bonds and a 20 carbon long chain with 4 double bonds. Thus,
the identity assigned to the peak at m/z of 782.5681 was PC(36:4). PCs are converted into LPCs by the action
of phospholipase A2 (PLA2) and a fatty acid.
Therefore, we checked for the presence of a LPC(16:0) species and
a fatty acyl chain of C20:4, which corresponds to arachidonic acid.
Both of these molecules were found in the serum of Cs-exposed mice
at higher levels than PC(36:4). The ratio of concentration of PC(36:4)
to the formed LPC(16:0) thus may be indicative of the activity of
PLA2. This ratio is shown in Figure 4 along with a proposed pathway for action of this enzyme. The ratio
suggests an increased activity for PLA2. Furthermore, arachidonic
acid is an inflammation marker and its increased levels in the 137Cs-exposed mice may suggest radiation-induced inflammation
in these mice and subsequently an increase in the activity of PLA2. Arachidonic is further converted to leukotrienes by lipogenases.
We detected leukotriene F4 in the serum at higher concentration in 137Cs-exposed mice (Figure 4).Furthermore, we analyzed the fatty acid elution window in the ESI– mode. As suggested by our previous pathway analysis,
we expected to see perturbations in the levels of linoleic acid. In
addition, we studied the serum levels of three fatty acids, linoleic,
oleic, and palmitic acids, along with acyl-carnitine and acetylcarnitine
species. Fatty acids are important sources of energy, and they are
converted into acyl-CoA during β-oxidation in the cytosol and
transported into mitochondria via carnitines to ultimately form acetyl-CoA
to be used in the TCA cycle. The carnitine is then deposited back
into cytosol.[17] Our data suggest a slight
decrease in the serum levels of the three fatty acids post-137Cs exposure, accompanied by a decrease in the relative concentration
of free carnitine. However, the serum levels of acetylcarnitine increased
by almost 40% post 137Cs exposure, which may suggest a
decrease in β-oxidation. Together with our metabolomics data,
this indicates a shift in energy production from fatty acids oxidation
to glycolysis as a result of 137Cs exposure. Figure 7 depicts the pathways indicated as significantly
perturbed in this study and how they are interconnected in energy
production. Amino acids such as tyrosine and phenylalanine enter the
energy production pathway by forming acetyl-CoA. Fatty acids also
ultimately form acetyl-CoA through β-oxidation. In addition
to fatty acids and amino acids, glucose also is converted into acetyl-CoA
through pyruvate production. All of these pathways help provide a
steady flow of acetyl-CoA into mitochondria to be used in the TCA
cycle. It is known that in the presence of environmental stimuli and
stress, such as radiation exposures, these pathways become perturbed,
which will ultimately affect the function of mitochondria and TCA
cycle energy production.[18] Furthermore,
a recent gene profiling study found significant changes in the expression
of genes associated with mitochondrial processes such as the electron
transport chain, and cellular respiration in white blood cells from
the same samples used in our study.[19] A
change in mitochondria function can also throw the balance between
ROS production and scavenging off. Our data suggest that exposure
to 137Cs may perturb fatty acid oxidation and trigger an
increase in TCA cycle and its feeder pathways. This may lead to higher
levels of ROS production and further damage to structural proteins
and enzymes. An increase in the serum abundance of dityrosine, a marker
of protein oxidation, may further support the proposed mechanism in
Figure 7. Further exploration of enzymatic
activity and chemical assays along with more in-depth and targeted
metabolomics and lipidomics is necessary to independently validate
these results and paint a more complete biosignature for the effects
of 137Cs exposure in serum.
Figure 7
Pathway illustration
of the overall metabolomic and lipidomic changes
in mouse serum post 137Cs exposure. At least two metabolites
in each noted pathway were found to be significantly perturbed (p value <0.05). The overall pathway analysis indicates
a shift in energy metabolism from fatty acid oxidation to glycolysis.
Pathway illustration
of the overall metabolomic and lipidomic changes
in mouse serum post 137Cs exposure. At least two metabolites
in each noted pathway were found to be significantly perturbed (p value <0.05). The overall pathway analysis indicates
a shift in energy metabolism from fatty acid oxidation to glycolysis.
Conclusion
In this study we used
a fast and robust LC–MSE technique, which allows
one to use the elution profile of precursor
masses and the fragmentation profiles obtained during high collision
energy scans to elucidate structural information on the detected spectral
features. By taking advantage of this technique we were able to comprehensively
study the effects of exposure to 137Cs, an internal emitter,
in the serum of mice. The findings suggest an up-regulation of TCA
cycle and down-regulation of fatty acid β-oxidation as a result
of exposure to 137Cs.
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