Literature DB >> 30843397

Liquid Chromatography-Mass Spectrometry-Based Metabolomics of Nonhuman Primates after 4 Gy Total Body Radiation Exposure: Global Effects and Targeted Panels.

Evan L Pannkuk1, Evagelia C Laiakis1,2, Kirandeep Gill2, Shreyans K Jain2, Khyati Y Mehta1, Denise Nishita3, Kim Bujold4, James Bakke3, Janet Gahagen3, Simon Authier4, Polly Chang3, Albert J Fornace1,2.   

Abstract

Rapid assessment of radiation signatures in noninvasive biofluids may aid in assigning proper medical treatments for acute radiation syndrome (ARS) and delegating limited resources after a nuclear disaster. Metabolomic platforms allow for rapid screening of biofluid signatures and show promise in differentiating radiation quality and time postexposure. Here, we use global metabolomics to differentiate temporal effects (1-60 d) found in nonhuman primate (NHP) urine and serum small molecule signatures after a 4 Gy total body irradiation. Random Forests analysis differentially classifies biofluid signatures according to days post 4 Gy exposure. Eight compounds involved in protein metabolism, fatty acid β oxidation, DNA base deamination, and general energy metabolism were identified in each urine and serum sample and validated through tandem MS. The greatest perturbations were seen at 1 d in urine and 1-21 d in serum. Furthermore, we developed a targeted liquid chromatography tandem mass spectrometry (LC-MS/MS) with multiple reaction monitoring (MRM) method to quantify a six compound panel (hypoxanthine, carnitine, acetylcarnitine, proline, taurine, and citrulline) identified in a previous training cohort at 7 d after a 4 Gy exposure. The highest sensitivity and specificity for classifying exposure at 7 d after a 4 Gy exposure included carnitine and acetylcarnitine in urine and taurine, carnitine, and hypoxanthine in serum. Receiver operator characteristic (ROC) curve analysis using combined compounds show excellent sensitivity and specificity in urine (area under the curve [AUC] = 0.99) and serum (AUC = 0.95). These results highlight the utility of MS platforms to differentiate time postexposure and acquire reliable quantitative biomarker panels for classifying exposed individuals.

Entities:  

Keywords:  biodosimetry; ionizing radiation; nonhuman primates; targeted metabolomics

Mesh:

Substances:

Year:  2019        PMID: 30843397      PMCID: PMC6559376          DOI: 10.1021/acs.jproteome.9b00101

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  51 in total

1.  Development and validation of a LC-MS/MS assay for quantitation of plasma citrulline for application to animal models of the acute radiation syndrome across multiple species.

Authors:  Jace W Jones; Gregory Tudor; Alexander Bennett; Ann M Farese; Maria Moroni; Catherine Booth; Thomas J MacVittie; Maureen A Kane
Journal:  Anal Bioanal Chem       Date:  2014-05-20       Impact factor: 4.142

2.  Development of a metabolomic radiation signature in urine from patients undergoing total body irradiation.

Authors:  Evagelia C Laiakis; Tytus D Mak; Sebastien Anizan; Sally A Amundson; Christopher A Barker; Suzanne L Wolden; David J Brenner; Albert J Fornace
Journal:  Radiat Res       Date:  2014-03-27       Impact factor: 2.841

3.  Correlation of Radiation Dose Estimates by DIC with the METREPOL Hematological Classes of Disease Severity.

Authors:  M Port; B Pieper; H D Dörr; A Hübsch; M Majewski; M Abend
Journal:  Radiat Res       Date:  2018-03-01       Impact factor: 2.841

4.  Gas Chromatography/Mass Spectrometry Metabolomics of Urine and Serum from Nonhuman Primates Exposed to Ionizing Radiation: Impacts on the Tricarboxylic Acid Cycle and Protein Metabolism.

Authors:  Evan L Pannkuk; Evagelia C Laiakis; Simon Authier; Karen Wong; Albert J Fornace
Journal:  J Proteome Res       Date:  2017-04-04       Impact factor: 4.466

5.  Enhanced radiosensitization of p53 mutant cells by oleamide.

Authors:  Yoon-Jin Lee; Da Yeon Chung; Su-Jae Lee; Gil Ja Jhon; Yun-Sil Lee
Journal:  Int J Radiat Oncol Biol Phys       Date:  2006-04-01       Impact factor: 7.038

6.  Nonhuman Primates with Acute Radiation Syndrome: Results from a Global Serum Metabolomics Study after 7.2 Gy Total-Body Irradiation.

Authors:  Evan L Pannkuk; Evagelia C Laiakis; Melissa Garcia; Albert J Fornace; Vijay K Singh
Journal:  Radiat Res       Date:  2018-09-05       Impact factor: 2.841

7.  Exposure to ionizing radiation reveals global dose- and time-dependent changes in the urinary metabolome of rat.

Authors:  Tytus D Mak; John B Tyburski; Kristopher W Krausz; John F Kalinich; Frank J Gonzalez; Albert J Fornace
Journal:  Metabolomics       Date:  2014-12-20       Impact factor: 4.290

Review 8.  Radiation combined injury: overview of NIAID research.

Authors:  Andrea L DiCarlo; Narayani Ramakrishnan; Richard J Hatchett
Journal:  Health Phys       Date:  2010-06       Impact factor: 1.316

9.  Adipose tissue and metabolic and inflammatory responses to stroke are altered in obese mice.

Authors:  Michael J Haley; Graham Mullard; Katherine A Hollywood; Garth J Cooper; Warwick B Dunn; Catherine B Lawrence
Journal:  Dis Model Mech       Date:  2017-08-10       Impact factor: 5.758

10.  The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases.

Authors:  Ron Caspi; Tomer Altman; Richard Billington; Kate Dreher; Hartmut Foerster; Carol A Fulcher; Timothy A Holland; Ingrid M Keseler; Anamika Kothari; Aya Kubo; Markus Krummenacker; Mario Latendresse; Lukas A Mueller; Quang Ong; Suzanne Paley; Pallavi Subhraveti; Daniel S Weaver; Deepika Weerasinghe; Peifen Zhang; Peter D Karp
Journal:  Nucleic Acids Res       Date:  2013-11-12       Impact factor: 16.971

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  11 in total

1.  Salivary Metabolomics of Total Body Irradiated Nonhuman Primates Reveals Long-Term Normal Tissue Responses to Radiation.

Authors:  Evagelia C Laiakis; Denise Nishita; Kim Bujold; Meth M Jayatilake; James Bakke; Janet Gahagen; Simon Authier; Polly Chang; Albert J Fornace
Journal:  Int J Radiat Oncol Biol Phys       Date:  2019-07-25       Impact factor: 7.038

2.  Small Molecule Signatures of Mice Lacking T-cell p38 Alternate Activation, a Model for Immunosuppression Conditions, after Total-Body Irradiation.

Authors:  Evan L Pannkuk; Evagelia C Laiakis; Jerry Angdisen; Meth M Jayatilake; Pelagie Ake; Lorreta Yun-Tien Lin; Heng-Hong Li; Albert J Fornace
Journal:  Radiat Res       Date:  2022-06-01       Impact factor: 3.372

3.  Quantitation of Urinary Acylcarnitines by DMS-MS/MS Uncovers the Effects of Total Body Irradiation in Cancer Patients.

Authors:  Nicholas B Vera; Stephen L Coy; Evagelia C Laiakis; Albert J Fornace; Michelle Clasquin; Christopher A Barker; Jeffrey A Pfefferkorn; Paul Vouros
Journal:  J Am Soc Mass Spectrom       Date:  2020-01-28       Impact factor: 3.109

4.  Biofluid Metabolomics of Mice Exposed to External Low-Dose Rate Radiation in a Novel Irradiation System, the Variable Dose-Rate External 137Cs Irradiator.

Authors:  Evan L Pannkuk; Evagelia C Laiakis; Michael Girgis; Guy Y Garty; Shad R Morton; Monica Pujol-Canadell; Shanaz A Ghandhi; Sally A Amundson; David J Brenner; Albert J Fornace
Journal:  J Proteome Res       Date:  2021-09-29       Impact factor: 5.370

5.  Effects of Genetic Variation on Urinary Small Molecule Signatures of Mice after Exposure to Ionizing Radiation: A Study of p53 Deficiency.

Authors:  Evan L Pannkuk; Evagelia C Laiakis; Pelagie Ake; Steven J Strawn; Yi-Wen Wang; Albert J Fornace
Journal:  Metabolites       Date:  2020-06-08

6.  Identification of Potential Biomarkers of Radiation Exposure in Blood Cells by Capillary Electrophoresis Time-of-Flight Mass Spectrometry.

Authors:  Lue Sun; Yohei Inaba; Norie Kanzaki; Mahesh Bekal; Koichi Chida; Takashi Moritake
Journal:  Int J Mol Sci       Date:  2020-01-27       Impact factor: 5.923

7.  Serum Metabolomic Alterations Associated with Cesium-137 Internal Emitter Delivered in Various Dose Rates.

Authors:  Heng-Hong Li; Yun-Tien Lin; Evagelia C Laiakis; Maryam Goudarzi; Waylon Weber; Albert J Fornace
Journal:  Metabolites       Date:  2020-06-30

8.  Enhancement of Acylcarnitine Levels in Small Intestine of Abdominal Irradiation Rats Might Relate to Fatty Acid β-Oxidation Pathway Disequilibration.

Authors:  Hai-Xiang Liu; Xue Lu; Hua Zhao; Shuang Li; Ling Gao; Mei Tian; Qing-Jie Liu
Journal:  Dose Response       Date:  2022-02-22       Impact factor: 2.658

Review 9.  Ecological and toxicological assessments of anthropogenic contaminants based on environmental metabolomics.

Authors:  Li-Juan Zhang; Lu Qian; Ling-Yun Ding; Lei Wang; Ming Hung Wong; Hu-Chun Tao
Journal:  Environ Sci Ecotechnol       Date:  2021-01-28

10.  Urine metabolomics based prediction model approach for radiation exposure.

Authors:  Ritu Tyagi; Kiran Maan; Subash Khushu; Poonam Rana
Journal:  Sci Rep       Date:  2020-09-30       Impact factor: 4.379

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