Literature DB >> 25149516

Regulation of gene expression in diverse cyanobacterial species by using theophylline-responsive riboswitches.

Amy T Ma1, Calvin M Schmidt1, James W Golden2.   

Abstract

Cyanobacteria are photosynthetic bacteria that are currently being developed as biological production platforms. They derive energy from light and carbon from atmospheric carbon dioxide, and some species can fix atmospheric nitrogen. One advantage of developing cyanobacteria for renewable production of biofuels and other biological products is that they are amenable to genetic manipulation, facilitating bioengineering and synthetic biology. To expand the currently available genetic toolkit, we have demonstrated the utility of synthetic theophylline-responsive riboswitches for effective regulation of gene expression in four diverse species of cyanobacteria, including two recent isolates. We evaluated a set of six riboswitches driving the expression of a yellow fluorescent protein reporter in Synechococcus elongatus PCC 7942, Leptolyngbya sp. strain BL0902, Anabaena sp. strain PCC 7120, and Synechocystis sp. strain WHSyn. We demonstrated that riboswitches can offer regulation of gene expression superior to that of the commonly used isopropyl-β-d-thiogalactopyranoside induction of a lacI(q)-Ptrc promoter system. We also showed that expression of the toxic protein SacB can be effectively regulated, demonstrating utility for riboswitch regulation of proteins that are detrimental to biomass accumulation. Taken together, the results of this work demonstrate the utility and ease of use of riboswitches in the context of genetic engineering and synthetic biology in diverse cyanobacteria, which will facilitate the development of algal biotechnology.
Copyright © 2014, American Society for Microbiology. All Rights Reserved.

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Year:  2014        PMID: 25149516      PMCID: PMC4249034          DOI: 10.1128/AEM.01697-14

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  43 in total

1.  Ploidy in cyanobacteria.

Authors:  Marco Griese; Christian Lange; Jörg Soppa
Journal:  FEMS Microbiol Lett       Date:  2011-09-06       Impact factor: 2.742

2.  Inducible gene expression from the plastid genome by a synthetic riboswitch.

Authors:  Andreas Verhounig; Daniel Karcher; Ralph Bock
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-22       Impact factor: 11.205

3.  Synthetic riboswitches that induce gene expression in diverse bacterial species.

Authors:  Shana Topp; Colleen M K Reynoso; Jessica C Seeliger; Ian S Goldlust; Shawn K Desai; Dorothée Murat; Aimee Shen; Aaron W Puri; Arash Komeili; Carolyn R Bertozzi; June R Scott; Justin P Gallivan
Journal:  Appl Environ Microbiol       Date:  2010-10-08       Impact factor: 4.792

4.  Synthetic riboswitches for the conditional control of gene expression in Streptomyces coelicolor.

Authors:  Martin M Rudolph; Michael-Paul Vockenhuber; Beatrix Suess
Journal:  Microbiology (Reading)       Date:  2013-05-15       Impact factor: 2.777

Review 5.  Metabolic design for cyanobacterial chemical synthesis.

Authors:  John W K Oliver; Shota Atsumi
Journal:  Photosynth Res       Date:  2014-04-10       Impact factor: 3.573

Review 6.  Nitrogen supply is an important driver of sustainable microalgae biofuel production.

Authors:  Jordan Peccia; Berat Haznedaroglu; James Gutierrez; Julie B Zimmerman
Journal:  Trends Biotechnol       Date:  2013-02-13       Impact factor: 19.536

7.  Production of therapeutic proteins in algae, analysis of expression of seven human proteins in the chloroplast of Chlamydomonas reinhardtii.

Authors:  Beth A Rasala; Machiko Muto; Philip A Lee; Michal Jager; Rosa M F Cardoso; Craig A Behnke; Peter Kirk; Craig A Hokanson; Roberto Crea; Michael Mendez; Stephen P Mayfield
Journal:  Plant Biotechnol J       Date:  2010-03-07       Impact factor: 9.803

Review 8.  Engineered riboswitches: Expanding researchers' toolbox with synthetic RNA regulators.

Authors:  Alexander Wittmann; Beatrix Suess
Journal:  FEBS Lett       Date:  2012-02-28       Impact factor: 4.124

9.  Gene transfer in Leptolyngbya sp. strain BL0902, a cyanobacterium suitable for production of biomass and bioproducts.

Authors:  Arnaud Taton; Ewa Lis; Dawn M Adin; Guogang Dong; Scott Cookson; Steve A Kay; Susan S Golden; James W Golden
Journal:  PLoS One       Date:  2012-01-24       Impact factor: 3.240

10.  Broad-host-range vector system for synthetic biology and biotechnology in cyanobacteria.

Authors:  Arnaud Taton; Federico Unglaub; Nicole E Wright; Wei Yue Zeng; Javier Paz-Yepes; Bianca Brahamsha; Brian Palenik; Todd C Peterson; Farzad Haerizadeh; Susan S Golden; James W Golden
Journal:  Nucleic Acids Res       Date:  2014-07-29       Impact factor: 16.971

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  35 in total

Review 1.  The Synthetic Biology Toolkit for Photosynthetic Microorganisms.

Authors:  Konstantinos Vavitsas; Pierre Crozet; Marcos Hamborg Vinde; Fiona Davies; Stéphane D Lemaire; Claudia E Vickers
Journal:  Plant Physiol       Date:  2019-07-01       Impact factor: 8.340

Review 2.  RNA Switches for Synthetic Biology.

Authors:  Calvin M Schmidt; Christina D Smolke
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-01-02       Impact factor: 10.005

3.  NOT Gate Genetic Circuits to Control Gene Expression in Cyanobacteria.

Authors:  Arnaud Taton; Amy T Ma; Mizuho Ota; Susan S Golden; James W Golden
Journal:  ACS Synth Biol       Date:  2017-08-21       Impact factor: 5.110

4.  Riboswitch regulation in cyanobacteria is independent of their habitat adaptations.

Authors:  Payal Singh; Nilesh Kumar; Minesh Jethva; Saurabh Yadav; Pragati Kumari; Archana Thakur; Hemant Ritturaj Kushwaha
Journal:  Physiol Mol Biol Plants       Date:  2018-02-08

5.  Improving the induction fold of riboregulators for cyanobacteria.

Authors:  Ippei Sakamoto; Koichi Abe; Sumiya Kawai; Kaori Tsukakoshi; Yuta Sakai; Koji Sode; Kazunori Ikebukuro
Journal:  RNA Biol       Date:  2018-02-01       Impact factor: 4.652

6.  In vivo biosensors: mechanisms, development, and applications.

Authors:  Shuobo Shi; Ee Lui Ang; Huimin Zhao
Journal:  J Ind Microbiol Biotechnol       Date:  2018-01-29       Impact factor: 3.346

7.  An Amoebal Grazer of Cyanobacteria Requires Cobalamin Produced by Heterotrophic Bacteria.

Authors:  Amy T Ma; Joris Beld; Bianca Brahamsha
Journal:  Appl Environ Microbiol       Date:  2017-05-01       Impact factor: 4.792

8.  Both Enolase and the DEAD-Box RNA Helicase CrhB Can Form Complexes with RNase E in Anabaena sp. Strain PCC 7120.

Authors:  Huaduo Yan; Xiuxiu Qin; Li Wang; Wenli Chen
Journal:  Appl Environ Microbiol       Date:  2020-06-17       Impact factor: 4.792

9.  Development of a cyanobacterial heterologous polyketide production platform.

Authors:  Julia Roulet; Arnaud Taton; James W Golden; Ana Arabolaza; Michael D Burkart; Hugo Gramajo
Journal:  Metab Eng       Date:  2018-07-21       Impact factor: 9.783

10.  Progress and challenges in engineering cyanobacteria as chassis for light-driven biotechnology.

Authors:  Andrew Hitchcock; C Neil Hunter; Daniel P Canniffe
Journal:  Microb Biotechnol       Date:  2019-12-27       Impact factor: 5.813

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