Literature DB >> 20935124

Synthetic riboswitches that induce gene expression in diverse bacterial species.

Shana Topp1, Colleen M K Reynoso, Jessica C Seeliger, Ian S Goldlust, Shawn K Desai, Dorothée Murat, Aimee Shen, Aaron W Puri, Arash Komeili, Carolyn R Bertozzi, June R Scott, Justin P Gallivan.   

Abstract

We developed a series of ligand-inducible riboswitches that control gene expression in diverse species of Gram-negative and Gram-positive bacteria, including human pathogens that have few or no previously reported inducible expression systems. We anticipate that these riboswitches will be useful tools for genetic studies in a wide range of bacteria.

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Year:  2010        PMID： 20935124      PMCID： PMC2988590          DOI： 10.1128/AEM.01537-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  28 in total

1.  Development of a thermally regulated broad-spectrum promoter system for use in pathogenic gram-positive species.

Authors:  David A Schofield; Caroline Westwater; Brian D Hoel; Phillip A Werner; James S Norris; Michael G Schmidt
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

2.  Genetic regulatory mechanisms in the synthesis of proteins.

Authors:  F JACOB; J MONOD
Journal:  J Mol Biol       Date:  1961-06       Impact factor: 5.469

Review 3.  Opportunities for genetic investigation afforded by Acinetobacter baylyi, a nutritionally versatile bacterial species that is highly competent for natural transformation.

Authors:  David M Young; Donna Parke; L Nicholas Ornston
Journal:  Annu Rev Microbiol       Date:  2005       Impact factor: 15.500

4.  Naturally transformable Acinetobacter sp. strain ADP1 belongs to the newly described species Acinetobacter baylyi.

Authors:  Mario Vaneechoutte; David M Young; L Nicholas Ornston; Thierry De Baere; Alexandr Nemec; Tanny Van Der Reijden; Emma Carr; Ingela Tjernberg; Lenie Dijkshoorn
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

5.  Magnetosomes are cell membrane invaginations organized by the actin-like protein MamK.

Authors:  Arash Komeili; Zhuo Li; Dianne K Newman; Grant J Jensen
Journal:  Science       Date:  2005-12-22       Impact factor: 47.728

6.  Screening for engineered neomycin riboswitches that control translation initiation.

Authors:  Julia E Weigand; Martin Sanchez; Ewald-Bernd Gunnesch; Sabrina Zeiher; Renee Schroeder; Beatrix Suess
Journal:  RNA       Date:  2007-11-13       Impact factor: 4.942

7.  Controlling gene expression in living cells through small molecule-RNA interactions.

Authors:  G Werstuck; M R Green
Journal:  Science       Date:  1998-10-09       Impact factor: 47.728

Review 8.  The global burden of group A streptococcal diseases.

Authors:  Jonathan R Carapetis; Andrew C Steer; E Kim Mulholland; Martin Weber
Journal:  Lancet Infect Dis       Date:  2005-11       Impact factor: 25.071

9.  Bacillus subtilis requires a "stringent" Shine-Dalgarno region for gene expression.

Authors:  L Band; D J Henner
Journal:  DNA       Date:  1984

Review 10.  The application of Tet repressor in prokaryotic gene regulation and expression.

Authors:  Ralph Bertram; Wolfgang Hillen
Journal:  Microb Biotechnol       Date:  2008-01       Impact factor: 5.813
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  74 in total

Review 1.  Overview of regulatory strategies and molecular elements in metabolic engineering of bacteria.

Authors:  Tianwen Wang; Xingyuan Ma; Guocheng Du; Jian Chen
Journal:  Mol Biotechnol       Date:  2012-11       Impact factor: 2.695

Review 2.  Synthetic RNA switches as a tool for temporal and spatial control over gene expression.

Authors:  Andrew L Chang; Joshua J Wolf; Christina D Smolke
Journal:  Curr Opin Biotechnol       Date:  2012-02-03       Impact factor: 9.740

3.  Characterization of Engineered PreQ1 Riboswitches for Inducible Gene Regulation in Mycobacteria.

Authors:  Erik R Van Vlack; Shana Topp; Jessica C Seeliger
Journal:  J Bacteriol       Date:  2017-02-28       Impact factor: 3.490

Review 4.  RNA Switches for Synthetic Biology.

Authors:  Calvin M Schmidt; Christina D Smolke
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-01-02       Impact factor: 10.005

5.  NOT Gate Genetic Circuits to Control Gene Expression in Cyanobacteria.

Authors:  Arnaud Taton; Amy T Ma; Mizuho Ota; Susan S Golden; James W Golden
Journal:  ACS Synth Biol       Date:  2017-08-21       Impact factor: 5.110

Review 6.  A versatile framework for microbial engineering using synthetic non-coding RNAs.

Authors:  Lei S Qi; Adam P Arkin
Journal:  Nat Rev Microbiol       Date:  2014-05       Impact factor: 60.633

7.  Regulation of gene expression in diverse cyanobacterial species by using theophylline-responsive riboswitches.

Authors:  Amy T Ma; Calvin M Schmidt; James W Golden
Journal:  Appl Environ Microbiol       Date:  2014-08-22       Impact factor: 4.792

Review 8.  Toward a genetic tool development pipeline for host-associated bacteria.

Authors:  Matthew C Waller; Josef R Bober; Nikhil U Nair; Chase L Beisel
Journal:  Curr Opin Microbiol       Date:  2017-06-15       Impact factor: 7.934

Review 9.  Regulatory RNAs: charming gene management styles for synthetic biology applications.

Authors:  Jorge Vazquez-Anderson; Lydia M Contreras
Journal:  RNA Biol       Date:  2013-11-18       Impact factor: 4.652

10.  Regulated Expression Systems for Mycobacteria and Their Applications.

Authors:  Dirk Schnappinger; Sabine Ehrt
Journal:  Microbiol Spectr       Date:  2014
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