Literature DB >> 25143579

Limited utility of dried-blood- and plasma spot-based screening for antiretroviral treatment failure with Cobas Ampliprep/TaqMan HIV-1 version 2.0.

Souleymane Sawadogo1, Andreas Shiningavamwe2, Joy Chang3, Andrew D Maher4, Guoqing Zhang3, Chunfu Yang3, Esegiel Gaeb2, Harold Kaura2, Dennis Ellenberger3, David W Lowrance4.   

Abstract

The 2013 WHO antiretroviral therapy (ART) guidelines recommend dried blood spots (DBS) as an alternative specimen type for viral load (VL) monitoring. We assessed the programmatic utility of screening for antiretroviral (ARV) treatment failure (TF) at 5,000 and 1,000 copies/ml using DBS and dried plasma spots (DPS) with a commonly used VL assay, the Roche Cobas Ampliprep/Cobas TaqMan V.2.0 (CAP/CTM). Plasma, DBS, and DPS were prepared from 839 whole-blood specimens collected from patients on ART for ≥ 6 months at three public facilities in Namibia. Using the CAP/CTM test, VL were measured in plasma, DBS, and DPS, and the results were compared using the plasma VL as the reference standard. The clinical sensitivities, specificities, and positive (PPV) and negative predictive values (NPV) of DBS at ARV TF diagnostic thresholds of 5,000 copies/ml and 1,000 copies/ml were 0.99, 0.55, 0.33, and 0.99 and 0.99, 0.26, 0.29, and 0.99, respectively, and for DPS at TF diagnostic thresholds of 5,000 copies/ml and 1,000 copies/ml, they were 0.88, 0.98, 0.92, and 0.97 and 0.91, 0.96, 0.89, and 0.97, respectively. The prevalences of TF were overestimated in DBS by 33% and 57% at these two thresholds, respectively. A high rate of false-positive results would occur if the CAP/CTM with DBS were to be used to screen for ARV TF. WHO recommendations for DBS-based VL monitoring should be specific to the VL assay version and type. Despite the better performance of DPS, the programmatic utility for TF screening may be limited by requirements for processing the whole blood at the collection site.
Copyright © 2014, American Society for Microbiology. All Rights Reserved.

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Year:  2014        PMID: 25143579      PMCID: PMC4313218          DOI: 10.1128/JCM.02063-14

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  17 in total

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Authors:  Xiaoxi Yang; Omid Forouzan; Theodore P Brown; Sergey S Shevkoplyas
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3.  Development and validation of a low cost blood filtration element separating plasma from undiluted whole blood.

Authors:  Alexandra Homsy; Peter D van der Wal; Werner Doll; Roland Schaller; Stefan Korsatko; Maria Ratzer; Martin Ellmerer; Thomas R Pieber; Andreas Nicol; Nico F de Rooij
Journal:  Biomicrofluidics       Date:  2012-03-15       Impact factor: 2.800

4.  Statistical methods for assessing agreement between two methods of clinical measurement.

Authors:  J M Bland; D G Altman
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5.  HIV viral load monitoring in resource-limited regions: optional or necessary?

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6.  Dried blood spots perform well in viral load monitoring of patients who receive antiretroviral treatment in rural Tanzania.

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Review 7.  Challenges in implementing HIV load testing in South Africa.

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8.  Fully automated quantification of human immunodeficiency virus (HIV) type 1 RNA in human plasma by the COBAS AmpliPrep/COBAS TaqMan system.

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Journal:  J Clin Virol       Date:  2007-02-27       Impact factor: 3.168

9.  Correlation between HIV-1 viral load quantification in plasma, dried blood spots, and dried plasma spots using the Roche COBAS Taqman assay.

Authors:  Mauro Andreotti; Maria Pirillo; Giovanni Guidotti; Susanna Ceffa; Giovanna Paturzo; Paola Germano; Richard Luhanga; David Chimwaza; Maria Grazia Mancini; Maria Cristina Marazzi; Stefano Vella; Leonardo Palombi; Marina Giuliano
Journal:  J Clin Virol       Date:  2009-12-04       Impact factor: 3.168

10.  Correlation between human immunodeficiency virus type 1 (HIV-1) RNA measurements obtained with dried blood spots and those obtained with plasma by use of Nuclisens EasyQ HIV-1 and Abbott RealTime HIV load tests.

Authors:  Carolina Garrido; Natalia Zahonero; Angélica Corral; Miguel Arredondo; Vincent Soriano; Carmen de Mendoza
Journal:  J Clin Microbiol       Date:  2009-02-04       Impact factor: 5.948

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  11 in total

1.  Estimation of HIV-1 DNA Level Interfering with Reliability of HIV-1 RNA Quantification Performed on Dried Blood Spots Collected from Successfully Treated Patients.

Authors:  Sylvie Zida; Edouard Tuaillon; Makoura Barro; Arnaud Kwimatouo Lekpa Franchard; Thérèse Kagoné; Boubacar Nacro; Abdoul Salam Ouedraogo; Karine Bolloré; Armen Sanosyan; Jean-Christophe Plantier; Nicolas Meda; Lassana Sangaré; Christine Rouzioux; François Rouet; Dramane Kania
Journal:  J Clin Microbiol       Date:  2016-03-23       Impact factor: 5.948

2.  Alternative Sample Types for HIV-1 Antiretroviral Drug Resistance Testing.

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Journal:  J Infect Dis       Date:  2017-12-01       Impact factor: 5.226

3.  Field evaluation of HIV-1 viral load monitoring in adults and children receiving antiretroviral treatment in Nigeria by dried blood spot testing with RealTime HIV-1 on m2000.

Authors:  Monday Tola; Ramadhani O Habib; Adebajo Sylvia; Trevor A Crowell; Nowak G Rebecca; Manhattan E Charurat; Patrick Dakum; Nicaise Ndembi
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4.  Stability of HIV-1 Nucleic Acids in cobas Plasma Separation Card for Viral Load Measurement.

Authors:  Adolfo Vubil; Carina Nhachigule; Ana Flora Zicai; Bindiya Meggi; Paulino da Costa; Nédio Mabunda; Sofia Viegas; Nádia Sitoe; Ilesh Jani
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5.  A Simple Phosphate-Buffered-Saline-Based Extraction Method Improves Specificity of HIV Viral Load Monitoring Using Dried Blood Spots.

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Review 6.  Dried Blood Spots for Global Health Diagnostics and Surveillance: Opportunities and Challenges.

Authors:  Mark D Lim
Journal:  Am J Trop Med Hyg       Date:  2018-06-28       Impact factor: 2.345

7.  Utility Of POC Xpert HIV-1 Tests For Detection-Quantification Of Complex HIV Recombinants Using Dried Blood Spots From Kinshasa, D. R. Congo.

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8.  Field Suitability and Diagnostic Accuracy of the Biocentric Open Real-Time PCR Platform for Dried Blood Spot-Based HIV Viral Load Quantification in Eswatini.

Authors:  Bernhard Kerschberger; Nombuso Ntshalintshali; Qhubekani Mpala; Paola Andrea Díaz Uribe; Gugu Maphalala; Sydney Kalombola; Addissu Bekele Telila; Tiwonge Chawinga; Mukelo Maphalala; Aditi Jani; Nomcebo Phugwayo; Roberto de la Tour; Nomxolise Nyoni; Javier Goiri; Sindisiwe Dlamini; Iza Ciglenecki; Emmanuel Fajardo
Journal:  J Acquir Immune Defic Syndr       Date:  2019-09-01       Impact factor: 3.731

9.  Separation of Plasma from Whole Blood by Use of the cobas Plasma Separation Card: a Compelling Alternative to Dried Blood Spots for Quantification of HIV-1 Viral Load.

Authors:  Sergio Carmona; Britta Seiverth; Dieketseng Magubane; Lucia Hans; Matthias Hoppler
Journal:  J Clin Microbiol       Date:  2019-03-28       Impact factor: 5.948

10.  Diagnostic Accuracy of Dried Plasma Spot Specimens for HIV-1 Viral Load Testing: A Systematic Review and Meta-analysis.

Authors:  Youyi Fong; Jessica Markby; Mauro Andreotti; Ingrid Beck; Thomas Bourlet; Don Brambilla; Lisa Frenkel; Rosalia Lira; Julie A E Nelson; Georgios Pollakis; Sandrine Reigadas; Douglas Richman; Souleymane Sawadogo; Laura Waters; Chunfu Yang; Clement Zeh; Meg Doherty; Lara Vojnov
Journal:  J Acquir Immune Defic Syndr       Date:  2022-03-01       Impact factor: 3.771

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