Literature DB >> 2514271

Nucleotide sequences of the 5.8S rRNA gene and internal transcribed spacer regions in carrot and broad bean ribosomal DNA.

Y Yokota1, T Kawata, Y Iida, A Kato, S Tanifuji.   

Abstract

Nucleotide sequences of the first and second internal transcribed spacers (ITS1 and ITS2, respectively) of ribosomal DNA (rDNA) from two dicot plants, carrot and broad bean, were determined. These sequences were compared with those of rice, a monocot plant, and other eukaryotic organisms. Both types of ITS region in some species of Angiospermae were the shortest among all eukaryotes so far examined and showed a wide range of variation in their G+C content, in contrast to a general trend toward very high G+C content in animals. Phylogenetic relationships of plants with animals and lower eukaryotes were considered using the nucleotide sequences of carrot and broad bean 5.8S rDNA that were determined in the present study, together with that of wheat 5.8S rRNA, which has been reported previously.

Entities:  

Mesh:

Substances:

Year:  1989        PMID: 2514271     DOI: 10.1007/bf02103617

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  26 in total

1.  Nucleotide sequence of the 17S-25S spacer region from rice rDNA.

Authors:  F Takaiwa; K Oono; M Sugiura
Journal:  Plant Mol Biol       Date:  1985-11       Impact factor: 4.076

2.  Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids.

Authors:  A J Berk; P A Sharp
Journal:  Cell       Date:  1977-11       Impact factor: 41.582

Review 3.  Construction of phylogenetic trees.

Authors:  W M Fitch; E Margoliash
Journal:  Science       Date:  1967-01-20       Impact factor: 47.728

4.  Multiple heterogeneities in the transcribed spacers of ribosomal DNA from Xenopus laevis.

Authors:  M A Stewart; L M Hall; B E Maden
Journal:  Nucleic Acids Res       Date:  1983-02-11       Impact factor: 16.971

5.  The nucleotide sequence of the intergenic region between the 5.8S and 26S rRNA genes of the yeast ribosomal RNA operon. Possible implications for the interaction between 5.8S and 26S rRNA and the processing of the primary transcript.

Authors:  G M Veldman; J Klootwijk; H van Heerikhuizen; R J Planta
Journal:  Nucleic Acids Res       Date:  1981-10-10       Impact factor: 16.971

6.  An improved algorithm for matching biological sequences.

Authors:  O Gotoh
Journal:  J Mol Biol       Date:  1982-12-15       Impact factor: 5.469

7.  Sequence analysis of the transcribed and 5' non-transcribed regions of the ribosomal RNA gene in Dictyostelium discoideum.

Authors:  T Ozaki; Y Hoshikawa; Y Iida; M Iwabuchi
Journal:  Nucleic Acids Res       Date:  1984-05-25       Impact factor: 16.971

8.  Nucleotide sequence of Dictyostelium discoideum 5.8S ribosomal ribonucleic acid: evolutionary and secondary structural implications.

Authors:  G J Olsen; M L Sogin
Journal:  Biochemistry       Date:  1982-05-11       Impact factor: 3.162

9.  The 5.8S RNA gene sequence and the ribosomal repeat of Schizosaccharomyces pombe.

Authors:  J Schaak; J Mao; D Söll
Journal:  Nucleic Acids Res       Date:  1982-05-11       Impact factor: 16.971

10.  Structure of mouse rRNA precursors. Complete sequence and potential folding of the spacer regions between 18S and 28S rRNA.

Authors:  B Michot; J P Bachellerie; F Raynal
Journal:  Nucleic Acids Res       Date:  1983-05-25       Impact factor: 16.971

View more
  25 in total

1.  Nucleotide sequences of the internal transcribed spacers and 5.8S rRNA gene in Canella winterana (Magnoliales; Canellaceae).

Authors:  Y Suh; L B Thien; E A Zimmer
Journal:  Nucleic Acids Res       Date:  1992-11-25       Impact factor: 16.971

2.  Phylogenetic analysis of Asian Symplocos (Symplocaceae) based on nuclear and chloroplast DNA sequences.

Authors:  Akiko Soejima; Hidetoshi Nagamasu
Journal:  J Plant Res       Date:  2004-04-22       Impact factor: 2.629

3.  Phylogenetic relationships in Bupleurum (apiaceae) based on nuclear ribosomal DNA its sequence data.

Authors:  Susana S Neves; Mark F Watson
Journal:  Ann Bot       Date:  2004-02-23       Impact factor: 4.357

4.  Cytology of Vicia species. X. Karyotype evolution and phylogenetic implication in Vicia species of the sections Atossa, Microcarinae, Wiggersia and Vicia.

Authors:  M Ruffini Castiglione; M Frediani; M T Gelati; C Ravalli; G Venora; P Caputo; R Cremonini
Journal:  Protoplasma       Date:  2010-11-06       Impact factor: 3.356

5.  Nuclear DNA contents, rDNAs, and karyotype evolution in subgenus Vicia: III. The heterogeneous section Hypechusa.

Authors:  P Caputo; M Frediani; G Venora; C Ravalli; M Ambrosio; R Cremonini
Journal:  Protoplasma       Date:  2006-07-17       Impact factor: 3.356

6.  Extensive 5.8S nrDNA polymorphism in Mammillaria (Cactaceae) with special reference to the identification of pseudogenic internal transcribed spacer regions.

Authors:  Doerte Harpke; Angela Peterson
Journal:  J Plant Res       Date:  2008-03-29       Impact factor: 2.629

7.  Eco-geographically divergent diploids, Caucasian clover (Trifolium ambiguum) and western clover (T. occidentale), retain most requirements for hybridization.

Authors:  Warren M Williams; Isabelle M Verry; Helal A Ansari; S Wajid Hussain; Ihsan Ullah; Michelle L Williamson; Nicholas W Ellison
Journal:  Ann Bot       Date:  2011-08-31       Impact factor: 4.357

8.  Phylogenetic analysis of Sorghum and related taxa using internal transcribed spacers of nuclear ribosomal DNA.

Authors:  Y Sun; D Z Skinner; G H Liang; S H Hulbert
Journal:  Theor Appl Genet       Date:  1994-09       Impact factor: 5.699

9.  Phylogeny and disjunct distribution: evolution of Saintpaulia (Gesneriaceae).

Authors:  M Möller; Q C Cronk
Journal:  Proc Biol Sci       Date:  1997-12-22       Impact factor: 5.349

10.  Molecular systematics of Angelica and allied genera (Apiaceae) from the Hengduan Mountains of China based on nrDNA ITS sequences: phylogenetic affinities and biogeographic implications.

Authors:  Tu Feng; Stephen R Downie; Yan Yu; Xuemei Zhang; Weiwei Chen; Xingjin He; Shuang Liu
Journal:  J Plant Res       Date:  2009-05-14       Impact factor: 2.629

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.