Literature DB >> 6328413

Sequence analysis of the transcribed and 5' non-transcribed regions of the ribosomal RNA gene in Dictyostelium discoideum.

T Ozaki, Y Hoshikawa, Y Iida, M Iwabuchi.   

Abstract

The nucleotide sequence of Dictyostelium discoideum rDNA extending over almost the entire transcribed region and a part of the 5' non-transcribed spacer region has been determined. Computer analysis revealed that there were several conserved sequences in the 17S, 5.8S and 26S coding regions when compared with the sequences at analogous positions in some eukaryotic rRNA genes. The data also showed that the D. discoideum rDNA contains several extra sequences, which have not been found in other eukaryotes' rDNAs , near the 3' terminus of the 17S coding region and the 5' terminus of the 26S coding region.

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Year:  1984        PMID： 6328413      PMCID： PMC318824          DOI： 10.1093/nar/12.10.4171

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  24 in total

1.  Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids.

Authors:  A J Berk; P A Sharp
Journal:  Cell       Date:  1977-11       Impact factor: 41.582

2.  A new method for sequencing DNA.

Authors:  A M Maxam; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1977-02       Impact factor: 11.205

3.  Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli.

Authors:  J Brosius; M L Palmer; P J Kennedy; H F Noller
Journal:  Proc Natl Acad Sci U S A       Date:  1978-10       Impact factor: 11.205

4.  The nucleotide sequence of Saccharomyces cerevisiae 5.8 S ribosomal ribonucleic acid.

Authors:  G M Rubin
Journal:  J Biol Chem       Date:  1973-06-10       Impact factor: 5.157

5.  Complete nucleotide sequence of a 23S ribosomal RNA gene from Escherichia coli.

Authors:  J Brosius; T J Dull; H F Noller
Journal:  Proc Natl Acad Sci U S A       Date:  1980-01       Impact factor: 11.205

6.  Organization of the ribosomal RNA genes of Dictyostelium discoideum: mapping of the nontranscribed spacer regions.

Authors:  A F Cockburn; M J Newkirk; R A Firtel
Journal:  Cell       Date:  1976-12       Impact factor: 41.582

7.  A simple method for DNA restriction site mapping.

Authors:  H O Smith; M L Birnstiel
Journal:  Nucleic Acids Res       Date:  1976-09       Impact factor: 16.971

8.  Some characteristics of processing sites in ribosomal precursor RNA of yeast.

Authors:  G M Veldman; R C Brand; J Klootwijk; R Planta
Journal:  Nucleic Acids Res       Date:  1980-07-11       Impact factor: 16.971

9.  The structure of rat 28S ribosomal ribonucleic acid inferred from the sequence of nucleotides in a gene.

Authors:  Y L Chan; J Olvera; I G Wool
Journal:  Nucleic Acids Res       Date:  1983-11-25       Impact factor: 16.971

10.  Secondary structure of the Dictyostelium discoideum small subunit ribosomal RNA.

Authors:  G J Olsen; R McCarroll; M L Sogin
Journal:  Nucleic Acids Res       Date:  1983-11-25       Impact factor: 16.971
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  23 in total

1.  A compilation of large subunit (23S- and 23S-like) ribosomal RNA structures.

Authors:  R R Gutell; M N Schnare; M W Gray
Journal:  Nucleic Acids Res       Date:  1992-05-11       Impact factor: 16.971

2.  A compilation of large subunit (23S-like) ribosomal RNA sequences presented in a secondary structure format.

Authors:  R R Gutell; M N Schnare; M W Gray
Journal:  Nucleic Acids Res       Date:  1990-04-25       Impact factor: 16.971

3.  Nucleotide sequence of the 17S-25S spacer region from rice rDNA.

Authors:  F Takaiwa; K Oono; M Sugiura
Journal:  Plant Mol Biol       Date:  1985-11       Impact factor: 4.076

4.  GC balance in the internal transcribed spacers ITS 1 and ITS 2 of nuclear ribosomal RNA genes.

Authors:  R A Torres; M Ganal; V Hemleben
Journal:  J Mol Evol       Date:  1990-02       Impact factor: 2.395

5.  Sequence and generation of mature ribosomal RNA transcripts in Dictyostelium discoideum.

Authors:  Carsten Boesler; Janis Kruse; Fredrik Söderbom; Christian Hammann
Journal:  J Biol Chem       Date:  2011-03-18       Impact factor: 5.157

6.  Primary structure of the Paramecium tetraurelia small-subunit rRNA coding region: phylogenetic relationships within the Ciliophora.

Authors:  M L Sogin; H J Elwood
Journal:  J Mol Evol       Date:  1986       Impact factor: 2.395

7.  Partial phylogeny of the unicellular eukaryotes based on rapid sequencing of a portion of 28S ribosomal RNA.

Authors:  A Baroin; R Perasso; L H Qu; G Brugerolle; J P Bachellerie; A Adoutte
Journal:  Proc Natl Acad Sci U S A       Date:  1988-05       Impact factor: 11.205

8.  A compilation of large subunit RNA sequences presented in a structural format.

Authors:  R R Gutell; G E Fox
Journal:  Nucleic Acids Res       Date:  1988       Impact factor: 16.971

9.  Dinoflagellates in evolution. A molecular phylogenetic analysis of large subunit ribosomal RNA.

Authors:  G Lenaers; L Maroteaux; B Michot; M Herzog
Journal:  J Mol Evol       Date:  1989-07       Impact factor: 2.395

10.  Nucleotide sequences of the 5.8S rRNA gene and internal transcribed spacer regions in carrot and broad bean ribosomal DNA.

Authors:  Y Yokota; T Kawata; Y Iida; A Kato; S Tanifuji
Journal:  J Mol Evol       Date:  1989-10       Impact factor: 2.395
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