| Literature DB >> 25094041 |
Mioy T Huynh1, David Schilter, Sharon Hammes-Schiffer, Thomas B Rauchfuss.
Abstract
Theory and experiment indicate that the protonation of reduced class="Chemical">NiFe dithiolates prEntities:
Mesh:
Substances:
Year: 2014 PMID: 25094041 PMCID: PMC4156870 DOI: 10.1021/ja505783z
Source DB: PubMed Journal: J Am Chem Soc ISSN: 0002-7863 Impact factor: 15.419
Figure 1Active site of [NiFe]-H2ase, a bidirectional catalyst, participates in redox and acid–base chemistry (left). Similar behavior is observed for the prototypical model complex 1 (right).
Scheme 1
Scheme 2IR Data (νCO/cm–1) for FeM (M = Ni, Pd, Pt) Compounds in CH2Cl2 Solution
| compound | FeNi | FePd | FePt |
|---|---|---|---|
| (OC)3Fe(pdt)M(dppe) | 2028, 1952[ | 2024, 1955 | 1962, 1883, 1870 |
| [(OC)3FeH(pdt)M(dppe)]BF4 | 2082, 2024[ | 2081, 2020 | 2081, 2022 |
| [(OC)3Fe(pdt)M(dppe)]BF4 | 2057, 1986[ | 2058, 1986 | 2058, 1987 |
| [Cy3P(OC)2Fe(pdt)M(dppe)]BF4 | 1966, 1899[ | 1964, 1900 | 1966, 1900 |
Figure 2ORTEP of 2 with ellipsoids drawn at the 50% probability level and H atoms omitted for clarity. Selected distances (Å) (mean DFT values in parentheses): Pd1–Fe1, 2.561 (2.56); Pd1–P1, 2.249; Pd1–P2, 2.271 (2.26); Pd1–S1, 2.573; Pd1–S2, 2.402 (2.49); Fe1–S1, 2.299; Fe1–S2, 2.275 (2.30); Fe1–C30, 1.795; Fe1–C31, 1.793; Fe1–C32, 1.798 (1.77). Selected angles (deg) (mean DFT values in parentheses): P1–Pd1–S1, 135.2; P1–Pd1–S2, 118.83; P2–Pd1–S1, 115.7; P2–Pd1–S2, 122.5 (135.1); S1–Fe1–C30, 162.2; S2–Fe1–C32, 163.1 (161.1).
Figure 3Cyclic voltammograms of 2 (dotted trace) and [2′]BF4 (solid trace) acquired in CH2Cl2 with 100 mM NBu4PF6. Potentials (V vs Fc0/+) were swept at 100 mV s–1.
Figure 4X-band EPR spectra (CH2Cl2/PhMe, 110 K) of [2]BF4 and [2′]BF4.
Calculated Spin Densities on Metal Centers in Mixed-Valence Fe(I)M(II) Species
| complex | ||
|---|---|---|
| [(OC)3Fe(pdt)Ni(dppe)]+ ([ | 0.04 | 1.03 |
| [Cy3P(OC)2Fe(pdt)Ni(dppe)]+ ([ | 0.01 | 1.14 |
| [(OC)3Fe(pdt)Pd(dppe)]+ ([ | 0.03 | 1.04 |
| [Cy3P(OC)3Fe(pdt)Pd(dppe)]+ ([ | 0.03 | 1.06 |
| [(OC)3Fe(pdt)Pt(dppe)]+ ([ | 0.03 | 1.03 |
| [Cy3P(OC)3Fe(pdt)Pt(dppe)]+ ([ | 0.04 | 1.05 |
Redox Potentials (V vs Fc0/+, Experimental and DFT-Calculated) and Associated Eletrochemical Data (Recorded at 0.1 Vs–1) for FeNi, FePd, and FePt Complexes (1 mM) in NBu4PF6 Electrolyte (100 mM CH2Cl2 Solution)
| +0.34 | +0.52 | –0.59 (0.90, 0.059) | –0.62 | |
| [ | –0.14 (0.68, 0.076) | –0.14 | –0.92 (1.00, 0.072) | –0.92 |
| +0.26 (0.29, 0.115) | +0.39 | –0.87 (0.98, 0.061) | –0.92 | |
| [ | –0.20 (0.67, 0.080) | –0.20 | –1.14 (0.83, 0.122) | –1.14 |
| +0.33 (0.49, 0.168) | ND | –0.93 (0.97, 0.105) | –0.91 | |
| [ | –0.19 (0.50, 0.076) | –0.24 | –1.37 (0.66, 0.067) | –1.38 |
ΔEp(Fc0/+) = 0.064 V under these conditions.
Anodic potential for irreversible oxidation.
Data from ref (15).
Calculated and experimental values for [1′]BF4 agree by construction and were used as references for the corresponding [1] waves.
Calculated and experimental values for [2′]BF4 agree by construction and were used as references for the corresponding [2], [3], and [3′] waves.
This value was not determined as difficulties arising from local minima led to inconclusive results.
This wave is assigned to a Fe0PtII/FeIPtII couple (vide infra).
Figure 5ORTEP of one of two independent complexes in [2H]BF4·THF·0.5Et2O with ellipsoids drawn at the 50% probability level. The solvate molecules, BF4– anion and H atoms (except the H– ligand) are omitted for clarity. Mean distances in the complexes (Å) (mean DFT values in parentheses): Pd2–Fe2, 2.882 (2.92); Pd2–H2, 2.173 (2.19); Pd2–P3, 2.253; Pd2–P4, 2.270 (2.30); Pd2–S3, 2.367; Pd2–S4, 2.363 (2.39); Fe2–S3, 2.330; Fe2–S4, 2.338 (2.34); Fe2–H2, 1.483 (1.54). Mean angles in the complexes (deg) (mean DFT values in parentheses): Pd2–H2–Fe2, 102.4 (101.2); P3–Pd2–S4, 171.5; P4–Pd2–S3, 177.7 (177.6); S3–Fe2–C35, 165.4; S4–Fe2–C33, 167.1 (165.8).
Figure 6Energy-minimized structure of 3 obtained with DFT. Selected distances (Å): Fe–Pt, 2.87; Fe–C1, 1.75; Fe–C2, 1.75; Fe–C3, 1.76; Fe–S1, 2.34; Fe–S2, 2.37; Pt–S1, 2.37; Pt–S2, 2.38; Pt–P1, 2.28; Pt–P2, 2.28. Selected angles (deg): C1–Fe–S2, 136.8; C2–Fe–S1, 169.4; S1–Pt–P2, 176.1; S2–Pt–P1, 177.7.
Scheme 3Calculated Reaction Free Energies and Free Energy Barriers (kcal/mol) for Rotation from Tetrahedral to Square-Planar Geometry at the M(dppe) Site in Compounds 1–3
| complex | Δ | Δ | Δ |
|---|---|---|---|
| (OC)3Fe(pdt)Ni(dppe) ( | –0.67 | 6.66 | 9.5 |
| (OC)3Fe(pdt)Pd(dppe) ( | +0.99 | 3.29 | <7.2 |
| (OC)3Fe(pdt)Pt(dppe) ( | –30.42 | ND | ND |
The potential energy surface was found to be extremely flat along the isomerization pathway. As a result, the single imaginary frequency for the transition state (TS) was <20 cm–1 for the two barriers given in this table. Each TS was verified to lead to the relevant tetrahedral and square-planar geometries by following the intrinsic reaction coordinate (IRC) for 4 or 5 steps in both directions and subsequently optimizing the geometries. As the imaginary frequencies may be below the numerical accuracy of the methodology, and the complete IRC was not obtained, the free energy barriers should be viewed with caution. Moreover, multiple TSs were found for 1, suggesting a ruffled potential energy surface connecting the two isomers, and only the highest free energy barrier is reported.
The TS was not determined for 3 as the isomerization was found to be significantly exergonic.
Estimated according to the Gutowsky–Holm relation using the coalescence temperature of 243 K (detailed in SI), but the DFT free energies were calculated at 298 K for consistency with other experiments. Note that the calculated and experimental free energy barriers are not exactly equivalent.
Scheme 4
Figure 7Energy-minimized structures obtained with DFT for [1H]+ with the (pdt)Ni(dppe) moiety either square-planar (red) or distorted tetrahedral (blue). The optimized geometries are superimposed and presented in two views. Other (higher energy) isomers/tautomers proposed can be found in Figure S57.
Scheme 5
Scheme 6