Literature DB >> 26421729

Models of the Ni-L and Ni-SIa States of the [NiFe]-Hydrogenase Active Site.

Geoffrey M Chambers1,2, Mioy T Huynh1, Yulong Li1, Sharon Hammes-Schiffer1, Thomas B Rauchfuss1,2, Edward Reijerse, Wolfgang Lubitz.   

Abstract

A new class of synthetic models for the active site of [NiFe]-hydrogenases are described. The Ni(I/II)(SCys)2 and Fe(II)(CN)2CO sites are represented with (RC5H4)Ni(I/II) and Fe(II)(diphos)(CO) modules, where diphos = 1,2-C2H4(PPh2)2(dppe) or cis-1,2-C2H2(PPh2)2(dppv). The two bridging thiolate ligands are represented by CH2(CH2S)2(2-) (pdt(2-)), Me2C(CH2S)2(2-) (Me2pdt(2-)), and (C6H5S)2(2-). The reaction of Fe(pdt)(CO)2(dppe) and [(C5H5)3Ni2]BF4 affords [(C5H5)Ni(pdt)Fe(dppe)(CO)]BF4 ([1a]BF4). Monocarbonyl [1a]BF4 features an S = 0 Ni(II)Fe(II) center with five-coordinated iron, as proposed for the Ni-SIa state of the enzyme. One-electron reduction of [1a](+) affords the S = 1/2 derivative [1a](0), which, according to density functional theory (DFT) calculations and electron paramagnetic resonance and Mössbauer spectroscopies, is best described as a Ni(I)Fe(II) compound. The Ni(I)Fe(II) assignment matches that for the Ni-L state in [NiFe]-hydrogenase, unlike recently reported Ni(II)Fe(I)-based models. Compound [1a](0) reacts with strong acids to liberate 0.5 equiv of H2 and regenerate [1a](+), indicating that H2 evolution is catalyzed by [1a](0). DFT calculations were used to investigate the pathway for H2 evolution and revealed that the mechanism can proceed through two isomers of [1a](0) that differ in the stereochemistry of the Fe(dppe)CO center. Calculations suggest that protonation of [1a](0) (both isomers) affords Ni(III)-H-Fe(II) intermediates, which represent mimics of the Ni-C state of the enzyme.

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Year:  2015        PMID: 26421729      PMCID: PMC4807737          DOI: 10.1021/acs.inorgchem.5b01662

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  47 in total

Review 1.  Structural and functional analogues of the active sites of the [Fe]-, [NiFe]-, and [FeFe]-hydrogenases.

Authors:  Cédric Tard; Christopher J Pickett
Journal:  Chem Rev       Date:  2009-06       Impact factor: 60.622

2.  Crystallographic characterization of a fully rotated, basic diiron dithiolate: model for the H(red) state?

Authors:  Wenguang Wang; Thomas B Rauchfuss; Curtis E Moore; Arnold L Rheingold; Luca De Gioia; Giuseppe Zampella
Journal:  Chemistry       Date:  2013-10-15       Impact factor: 5.236

3.  Proton-coupled electron transfer dynamics in the catalytic mechanism of a [NiFe]-hydrogenase.

Authors:  Brandon L Greene; Chang-Hao Wu; Patrick M McTernan; Michael W W Adams; R Brian Dyer
Journal:  J Am Chem Soc       Date:  2015-03-30       Impact factor: 15.419

4.  Hydrogens detected by subatomic resolution protein crystallography in a [NiFe] hydrogenase.

Authors:  Hideaki Ogata; Koji Nishikawa; Wolfgang Lubitz
Journal:  Nature       Date:  2015-01-26       Impact factor: 49.962

5.  Production of hydrogen by electrocatalysis: making the H-H bond by combining protons and hydrides.

Authors:  R Morris Bullock; Aaron M Appel; Monte L Helm
Journal:  Chem Commun (Camb)       Date:  2014-03-25       Impact factor: 6.222

6.  Further characterization of the spin coupling observed in oxidized hydrogenase from Chromatium vinosum. A Mössbauer and multifrequency EPR study.

Authors:  K K Surerus; M Chen; J W van der Zwaan; F M Rusnak; M Kolk; E C Duin; S P Albracht; E Münck
Journal:  Biochemistry       Date:  1994-04-26       Impact factor: 3.162

7.  A functional [NiFe]hydrogenase mimic that catalyzes electron and hydride transfer from H2.

Authors:  Seiji Ogo; Koji Ichikawa; Takahiro Kishima; Takahiro Matsumoto; Hidetaka Nakai; Katsuhiro Kusaka; Takashi Ohhara
Journal:  Science       Date:  2013-02-08       Impact factor: 47.728

8.  Infrared Spectroscopy During Electrocatalytic Turnover Reveals the Ni-L Active Site State During H2 Oxidation by a NiFe Hydrogenase.

Authors:  Ricardo Hidalgo; Philip A Ash; Adam J Healy; Kylie A Vincent
Journal:  Angew Chem Int Ed Engl       Date:  2015-04-29       Impact factor: 15.336

9.  Synthesis and vibrational spectroscopy of (57)Fe-labeled models of [NiFe] hydrogenase: first direct observation of a nickel-iron interaction.

Authors:  David Schilter; Vladimir Pelmenschikov; Hongxin Wang; Florian Meier; Leland B Gee; Yoshitaka Yoda; Martin Kaupp; Thomas B Rauchfuss; Stephen P Cramer
Journal:  Chem Commun (Camb)       Date:  2014-11-14       Impact factor: 6.222

10.  Ferrous Carbonyl Dithiolates as Precursors to FeFe, FeCo, and FeMn Carbonyl Dithiolates.

Authors:  Maria E Carroll; Jinzhu Chen; Danielle E Gray; James C Lansing; Thomas B Rauchfuss; David Schilter; Phillip I Volkers; Scott R Wilson
Journal:  Organometallics       Date:  2014-02-03       Impact factor: 3.876

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  7 in total

Review 1.  Hydrogenase Enzymes and Their Synthetic Models: The Role of Metal Hydrides.

Authors:  David Schilter; James M Camara; Mioy T Huynh; Sharon Hammes-Schiffer; Thomas B Rauchfuss
Journal:  Chem Rev       Date:  2016-06-29       Impact factor: 60.622

2.  Mechanism of H2 Production by Models for the [NiFe]-Hydrogenases: Role of Reduced Hydrides.

Authors:  Olbelina A Ulloa; Mioy T Huynh; Casseday P Richers; Jeffery A Bertke; Mark J Nilges; Sharon Hammes-Schiffer; Thomas B Rauchfuss
Journal:  J Am Chem Soc       Date:  2016-07-18       Impact factor: 15.419

3.  Synthetic Models for Nickel-Iron Hydrogenase Featuring Redox-Active Ligands.

Authors:  David Schilter; Danielle L Gray; Amy L Fuller; Thomas B Rauchfuss
Journal:  Aust J Chem       Date:  2017-01-11       Impact factor: 1.321

Review 4.  Second and Outer Coordination Sphere Effects in Nitrogenase, Hydrogenase, Formate Dehydrogenase, and CO Dehydrogenase.

Authors:  Sven T Stripp; Benjamin R Duffus; Vincent Fourmond; Christophe Léger; Silke Leimkühler; Shun Hirota; Yilin Hu; Andrew Jasniewski; Hideaki Ogata; Markus W Ribbe
Journal:  Chem Rev       Date:  2022-07-18       Impact factor: 72.087

5.  Nickel-centred proton reduction catalysis in a model of [NiFe] hydrogenase.

Authors:  Deborah Brazzolotto; Marcello Gennari; Nicolas Queyriaux; Trevor R Simmons; Jacques Pécaut; Serhiy Demeshko; Franc Meyer; Maylis Orio; Vincent Artero; Carole Duboc
Journal:  Nat Chem       Date:  2016-07-18       Impact factor: 24.427

6.  Heterodinuclear nickel(ii)-iron(ii) azadithiolates as structural and functional models for the active site of [NiFe]-hydrogenases.

Authors:  Li-Cheng Song; Bei-Bei Liu; Wen-Bo Liu; Zheng-Lei Tan
Journal:  RSC Adv       Date:  2020-08-28       Impact factor: 4.036

7.  The large subunit of the regulatory [NiFe]-hydrogenase from Ralstonia eutropha - a minimal hydrogenase?

Authors:  Giorgio Caserta; Christian Lorent; Alexandre Ciaccafava; Matthias Keck; Raffaella Breglia; Claudio Greco; Christian Limberg; Peter Hildebrandt; Stephen P Cramer; Ingo Zebger; Oliver Lenz
Journal:  Chem Sci       Date:  2020-04-27       Impact factor: 9.825

  7 in total

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