Literature DB >> 24955237

Epigenetic Manipulation of a Filamentous Fungus by the Proteasome-Inhibitor Bortezomib Induces the Production of an Additional Secondary Metabolite.

Karen M VanderMolen1, Blaise A Darveaux2, Wei-Lun Chen3, Steven M Swanson3, Cedric J Pearce2, Nicholas H Oberlies1.   

Abstract

The use of epigenetic modifiers, such as histone deacetylase inhibitors and DNA methyltransferase inhibitors, has been explored increasingly as a technique to induce the production of additional microbial secondary metabolites. The application of such molecules to microbial cultures has been shown to upregulate otherwise suppressed genes, and in several cases has led to the production of new molecular structures. In this study, the proteasome inhibitor bortezomib was used to induce the production of an additional metabolite from a filamentous fungus (Pleosporales). The induced metabolite was previously isolated from a plant, but the configuration was not assigned until now; in addition, an analogue was isolated from a degraded sample, yielding a new compound. Proteasome inhibitors have not previously been used in this application and offer an additional tool for microbial genome mining.

Entities:  

Year:  2014        PMID: 24955237      PMCID: PMC4061710          DOI: 10.1039/C4RA00274A

Source DB:  PubMed          Journal:  RSC Adv        ISSN: 2046-2069            Impact factor:   3.361


  21 in total

1.  Nongenetic reprogramming of a fungal highly reducing polyketide synthase.

Authors:  Ahmed A Yakasai; Jack Davison; Zahida Wasil; Laura M Halo; Craig P Butts; Colin M Lazarus; Andrew M Bailey; Thomas J Simpson; Russell J Cox
Journal:  J Am Chem Soc       Date:  2011-06-28       Impact factor: 15.419

2.  Triggering cryptic natural product biosynthesis in microorganisms.

Authors:  Kirstin Scherlach; Christian Hertweck
Journal:  Org Biomol Chem       Date:  2009-03-06       Impact factor: 3.876

3.  Proteasome inhibitor induced gene expression profiles reveal overexpression of transcriptional regulators ATF3, GADD153 and MAD1.

Authors:  J Zimmermann; D Erdmann; I Lalande; R Grossenbacher; M Noorani; P Fürst
Journal:  Oncogene       Date:  2000-06-08       Impact factor: 9.867

4.  Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).

Authors:  S D Bentley; K F Chater; A-M Cerdeño-Tárraga; G L Challis; N R Thomson; K D James; D E Harris; M A Quail; H Kieser; D Harper; A Bateman; S Brown; G Chandra; C W Chen; M Collins; A Cronin; A Fraser; A Goble; J Hidalgo; T Hornsby; S Howarth; C-H Huang; T Kieser; L Larke; L Murphy; K Oliver; S O'Neil; E Rabbinowitsch; M-A Rajandream; K Rutherford; S Rutter; K Seeger; D Saunders; S Sharp; R Squares; S Squares; K Taylor; T Warren; A Wietzorrek; J Woodward; B G Barrell; J Parkhill; D A Hopwood
Journal:  Nature       Date:  2002-05-09       Impact factor: 49.962

5.  Histone deacetylase inhibitors as a tool to up-regulate new fungal biosynthetic products: isolation of EGM-556, a cyclodepsipeptide, from Microascus sp.

Authors:  Hélène C Vervoort; Marija Drašković; Phillip Crews
Journal:  Org Lett       Date:  2010-12-21       Impact factor: 6.005

6.  Chemical induction of silent biosynthetic pathway transcription in Aspergillus niger.

Authors:  K M Fisch; A F Gillaspy; M Gipson; J C Henrikson; A R Hoover; L Jackson; F Z Najar; H Wägele; R H Cichewicz
Journal:  J Ind Microbiol Biotechnol       Date:  2009-06-12       Impact factor: 3.346

7.  The proteasome restricts permissive transcription at tissue-specific gene loci in embryonic stem cells.

Authors:  Henrietta Szutorisz; Andrew Georgiou; László Tora; Niall Dillon
Journal:  Cell       Date:  2006-12-29       Impact factor: 41.582

8.  Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus.

Authors:  William C Nierman; Arnab Pain; Michael J Anderson; Jennifer R Wortman; H Stanley Kim; Javier Arroyo; Matthew Berriman; Keietsu Abe; David B Archer; Clara Bermejo; Joan Bennett; Paul Bowyer; Dan Chen; Matthew Collins; Richard Coulsen; Robert Davies; Paul S Dyer; Mark Farman; Nadia Fedorova; Natalie Fedorova; Tamara V Feldblyum; Reinhard Fischer; Nigel Fosker; Audrey Fraser; Jose L García; Maria J García; Arlette Goble; Gustavo H Goldman; Katsuya Gomi; Sam Griffith-Jones; Ryan Gwilliam; Brian Haas; Hubertus Haas; David Harris; H Horiuchi; Jiaqi Huang; Sean Humphray; Javier Jiménez; Nancy Keller; Hoda Khouri; Katsuhiko Kitamoto; Tetsuo Kobayashi; Sven Konzack; Resham Kulkarni; Toshitaka Kumagai; Anne Lafon; Anne Lafton; Jean-Paul Latgé; Weixi Li; Angela Lord; Charles Lu; William H Majoros; Gregory S May; Bruce L Miller; Yasmin Mohamoud; Maria Molina; Michel Monod; Isabelle Mouyna; Stephanie Mulligan; Lee Murphy; Susan O'Neil; Ian Paulsen; Miguel A Peñalva; Mihaela Pertea; Claire Price; Bethan L Pritchard; Michael A Quail; Ester Rabbinowitsch; Neil Rawlins; Marie-Adele Rajandream; Utz Reichard; Hubert Renauld; Geoffrey D Robson; Santiago Rodriguez de Córdoba; Jose M Rodríguez-Peña; Catherine M Ronning; Simon Rutter; Steven L Salzberg; Miguel Sanchez; Juan C Sánchez-Ferrero; David Saunders; Kathy Seeger; Rob Squares; Steven Squares; Michio Takeuchi; Fredj Tekaia; Geoffrey Turner; Carlos R Vazquez de Aldana; Janice Weidman; Owen White; John Woodward; Jae-Hyuk Yu; Claire Fraser; James E Galagan; Kiyoshi Asai; Masayuki Machida; Neil Hall; Bart Barrell; David W Denning
Journal:  Nature       Date:  2005-12-22       Impact factor: 49.962

9.  Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae.

Authors:  James E Galagan; Sarah E Calvo; Christina Cuomo; Li-Jun Ma; Jennifer R Wortman; Serafim Batzoglou; Su-In Lee; Meray Baştürkmen; Christina C Spevak; John Clutterbuck; Vladimir Kapitonov; Jerzy Jurka; Claudio Scazzocchio; Mark Farman; Jonathan Butler; Seth Purcell; Steve Harris; Gerhard H Braus; Oliver Draht; Silke Busch; Christophe D'Enfert; Christiane Bouchier; Gustavo H Goldman; Deborah Bell-Pedersen; Sam Griffiths-Jones; John H Doonan; Jaehyuk Yu; Kay Vienken; Arnab Pain; Michael Freitag; Eric U Selker; David B Archer; Miguel A Peñalva; Berl R Oakley; Michelle Momany; Toshihiro Tanaka; Toshitaka Kumagai; Kiyoshi Asai; Masayuki Machida; William C Nierman; David W Denning; Mark Caddick; Michael Hynes; Mathieu Paoletti; Reinhard Fischer; Bruce Miller; Paul Dyer; Matthew S Sachs; Stephen A Osmani; Bruce W Birren
Journal:  Nature       Date:  2005-12-22       Impact factor: 49.962

10.  Resorcylic acid lactones with cytotoxic and NF-κB inhibitory activities and their structure-activity relationships.

Authors:  Sloan Ayers; Tyler N Graf; Audrey F Adcock; David J Kroll; Susan Matthew; Esperanza J Carcache de Blanco; Qi Shen; Steven M Swanson; Mansukh C Wani; Cedric J Pearce; Nicholas H Oberlies
Journal:  J Nat Prod       Date:  2011-04-22       Impact factor: 4.803

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  10 in total

Review 1.  Droplet probe: coupling chromatography to the in situ evaluation of the chemistry of nature.

Authors:  Nicholas H Oberlies; Sonja L Knowles; Chiraz Soumia M Amrine; Diana Kao; Vilmos Kertesz; Huzefa A Raja
Journal:  Nat Prod Rep       Date:  2019-05-21       Impact factor: 13.423

Review 2.  Antibiotic dialogues: induction of silent biosynthetic gene clusters by exogenous small molecules.

Authors:  Bethany K Okada; Mohammad R Seyedsayamdost
Journal:  FEMS Microbiol Rev       Date:  2016-08-29       Impact factor: 16.408

3.  An epigenetic modifier induces production of 3-(4-oxopyrano)-chromen-2-ones in Aspergillus sp. AST0006, an endophytic fungus of Astragalus lentiginosus.

Authors:  Marcelo R de Amorim; E M Kithsiri Wijeratne; Shengliang Zhou; A Elizabeth Arnold; Andrea N L Batista; João M Batista; Lourdes C Dos Santos; A A Leslie Gunatilaka
Journal:  Tetrahedron       Date:  2020-08-22       Impact factor: 2.457

4.  An epigenetic modifier induces production of (10'S)-verruculide B, an inhibitor of protein tyrosine phosphatases by Phoma sp. nov. LG0217, a fungal endophyte of Parkinsonia microphylla.

Authors:  Juliana R Gubiani; E M Kithsiri Wijeratne; Taoda Shi; Angela R Araujo; A Elizabeth Arnold; Eli Chapman; A A Leslie Gunatilaka
Journal:  Bioorg Med Chem       Date:  2017-02-03       Impact factor: 3.641

5.  Bortezomib-induced new bergamotene derivatives xylariterpenoids H-K from sponge-derived fungus Pestalotiopsis maculans 16F-12.

Authors:  Yingxin Li; Fengli Zhang; Shivakumar Banakar; Zhiyong Li
Journal:  RSC Adv       Date:  2019-01-02       Impact factor: 3.361

6.  Identification and Biological Evaluation of Secondary Metabolites from Marine Derived Fungi-Aspergillus sp. SCSIOW3, Cultivated in the Presence of Epigenetic Modifying Agents.

Authors:  Xiaofan Li; Zhenyao Xia; Jianqiang Tang; Jiahui Wu; Jing Tong; Mengjie Li; Jianhua Ju; Huirong Chen; Liyan Wang
Journal:  Molecules       Date:  2017-08-04       Impact factor: 4.411

Review 7.  Epigenetic Activation of Silent Biosynthetic Gene Clusters in Endophytic Fungi Using Small Molecular Modifiers.

Authors:  Lynise C Pillay; Lucpah Nekati; Phuti J Makhwitine; Sizwe I Ndlovu
Journal:  Front Microbiol       Date:  2022-02-14       Impact factor: 5.640

8.  Time Dependency of Chemodiversity and Biosynthetic Pathways: An LC-MS Metabolomic Study of Marine-Sourced Penicillium.

Authors:  Catherine Roullier; Samuel Bertrand; Elodie Blanchet; Mathilde Peigné; Thibaut Robiou du Pont; Yann Guitton; Yves François Pouchus; Olivier Grovel
Journal:  Mar Drugs       Date:  2016-05-21       Impact factor: 5.118

9.  An anticonvulsive drug, valproic acid (valproate), has effects on the biosynthesis of fatty acids and polyketides in microorganisms.

Authors:  Prapassorn Poolchanuan; Panida Unagul; Sanit Thongnest; Suthep Wiyakrutta; Nattaya Ngamrojanavanich; Chulabhorn Mahidol; Somsak Ruchirawat; Prasat Kittakoop
Journal:  Sci Rep       Date:  2020-06-09       Impact factor: 4.379

10.  Media and strain studies for the scaled production of cis-enone resorcylic acid lactones as feedstocks for semisynthesis.

Authors:  Zeinab Y Al Subeh; Huzefa A Raja; Jennifer C Obike; Cedric J Pearce; Mitchell P Croatt; Nicholas H Oberlies
Journal:  J Antibiot (Tokyo)       Date:  2021-06-21       Impact factor: 3.424

  10 in total

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