Literature DB >> 24907332

Identification and characterization of a halotolerant, cold-active marine endo-β-1,4-glucanase by using functional metagenomics of seaweed-associated microbiota.

Marjolaine Martin1, Sophie Biver2, Sébastien Steels2, Tristan Barbeyron3, Murielle Jam3, Daniel Portetelle2, Gurvan Michel3, Micheline Vandenbol2.   

Abstract

A metagenomic library was constructed from microorganisms associated with the brown alga Ascophyllum nodosum. Functional screening of this library revealed 13 novel putative esterase loci and two glycoside hydrolase loci. Sequence and gene cluster analysis showed the wide diversity of the identified enzymes and gave an idea of the microbial populations present during the sample collection period. Lastly, an endo-β-1,4-glucanase having less than 50% identity to sequences of known cellulases was purified and partially characterized, showing activity at low temperature and after prolonged incubation in concentrated salt solutions.
Copyright © 2014, American Society for Microbiology. All Rights Reserved.

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Year:  2014        PMID: 24907332      PMCID: PMC4135742          DOI: 10.1128/AEM.01194-14

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  60 in total

1.  Bacterial lipolytic enzymes: classification and properties.

Authors:  J L Arpigny; K E Jaeger
Journal:  Biochem J       Date:  1999-10-01       Impact factor: 3.857

2.  Molecular cloning, purification, and characterization of a novel, acidic, pH-stable endoglucanase from Martelella mediterranea.

Authors:  Junli Dong; Yuzhi Hong; Zongze Shao; Ziduo Liu
Journal:  J Microbiol       Date:  2010-06-23       Impact factor: 3.422

3.  Regulation of endo-acting glycosyl hydrolases in the hyperthermophilic bacterium Thermotoga maritima grown on glucan- and mannan-based polysaccharides.

Authors:  Swapnil R Chhabra; Keith R Shockley; Donald E Ward; Robert M Kelly
Journal:  Appl Environ Microbiol       Date:  2002-02       Impact factor: 4.792

4.  Biochemical characterization and crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima.

Authors:  Jose H Pereira; Zhiwei Chen; Ryan P McAndrew; Rajat Sapra; Swapnil R Chhabra; Kenneth L Sale; Blake A Simmons; Paul D Adams
Journal:  J Struct Biol       Date:  2010-07-03       Impact factor: 2.867

5.  [Cloning and identification of cellulase genes from uncultured microorganisms in pulp sediments from paper mill effluent].

Authors:  Yue-Qiang Xu; Cheng-Jie Duan; Quan-Neng Zhou; Ji-Liang Tang; Jia-Xun Feng
Journal:  Wei Sheng Wu Xue Bao       Date:  2006-10

6.  Characterization and gene cloning of a cold-active cellulase from a deep-sea psychrotrophic bacterium Pseudoalteromonas sp. DY3.

Authors:  Runying Zeng; Pengjun Xiong; Jianjun Wen
Journal:  Extremophiles       Date:  2005-08-24       Impact factor: 2.395

7.  Isolation and characterization of a novel lipase from a metagenomic library of tidal flat sediments: evidence for a new family of bacterial lipases.

Authors:  Mi-Hwa Lee; Choong-Hwan Lee; Tae-Kwang Oh; Jae Kwang Song; Jung-Hoon Yoon
Journal:  Appl Environ Microbiol       Date:  2006-09-01       Impact factor: 4.792

8.  Characterization and its potential application of two esterases derived from the arctic sediment metagenome.

Authors:  Jeong Ho Jeon; Jun-Tae Kim; Sung Gyun Kang; Jung-Hyun Lee; Sang-Jin Kim
Journal:  Mar Biotechnol (NY)       Date:  2008-09-24       Impact factor: 3.619

9.  Characterisation of two bifunctional cellulase-xylanase enzymes isolated from a bovine rumen metagenome library.

Authors:  K J Rashamuse; D F Visser; F Hennessy; J Kemp; M P Roux-van der Merwe; J Badenhorst; T Ronneburg; R Francis-Pope; D Brady
Journal:  Curr Microbiol       Date:  2012-10-20       Impact factor: 2.188

10.  Identification of carbohydrate metabolism genes in the metagenome of a marine biofilm community shown to be dominated by gammaproteobacteria and bacteroidetes.

Authors:  Jennifer L Edwards; Darren L Smith; John Connolly; James E McDonald; Michael J Cox; Ian Joint; Clive Edwards; Alan J McCarthy
Journal:  Genes (Basel)       Date:  2010-10-26       Impact factor: 4.096

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  10 in total

1.  A Novel Subfamily of Endo-β-1,4-Glucanases in Glycoside Hydrolase Family 10.

Authors:  Fang Zhao; Hai-Yan Cao; Long-Sheng Zhao; Yi Zhang; Chun-Yang Li; Yu-Zhong Zhang; Ping-Yi Li; Peng Wang; Xiu-Lan Chen
Journal:  Appl Environ Microbiol       Date:  2019-08-29       Impact factor: 4.792

Review 2.  Improved cultivation and metagenomics as new tools for bioprospecting in cold environments.

Authors:  Jan Kjølhede Vester; Mikkel Andreas Glaring; Peter Stougaard
Journal:  Extremophiles       Date:  2014-11-16       Impact factor: 2.395

3.  Cloning, expression and characterization of a cold-adapted endo-1, 4-β-glucanase from Citrobacter farmeri A1, a symbiotic bacterium of Reticulitermes labralis.

Authors:  Xi Bai; Xianjun Yuan; Aiyou Wen; Junfeng Li; Yunfeng Bai; Tao Shao
Journal:  PeerJ       Date:  2016-11-08       Impact factor: 2.984

4.  Isolation and Characterization of a Novel Cold-Active, Halotolerant Endoxylanase from Echinicola rosea sp. Nov. JL3085T.

Authors:  Jianlong He; Le Liu; Xiaoyan Liu; Kai Tang
Journal:  Mar Drugs       Date:  2020-05-06       Impact factor: 5.118

Review 5.  Role of metagenomics in prospecting novel endoglucanases, accentuating functional metagenomics approach in second-generation biofuel production: a review.

Authors:  Ninian Prem Prashanth Pabbathi; Aditya Velidandi; Tanvi Tavarna; Shreyash Gupta; Ram Sarvesh Raj; Pradeep Kumar Gandam; Rama Raju Baadhe
Journal:  Biomass Convers Biorefin       Date:  2021-01-07       Impact factor: 4.987

Review 6.  Current Status of Mining, Modification, and Application of Cellulases in Bioactive Substance Extraction.

Authors:  Yawei Hu; Guangbo Kang; Lina Wang; Mengxue Gao; Ping Wang; Dong Yang; He Huang
Journal:  Curr Issues Mol Biol       Date:  2021-07-13       Impact factor: 2.976

7.  Isolation, identification, and biochemical characterization of a novel bifunctional phosphomannomutase/phosphoglucomutase from the metagenome of the brown alga Laminaria digitata.

Authors:  Stephen A Jackson; Maohang Duan; Pengyan Zhang; Maureen W Ihua; Dagmar B Stengel; Delin Duan; Alan D W Dobson
Journal:  Front Microbiol       Date:  2022-09-23       Impact factor: 6.064

8.  The Cultivable Surface Microbiota of the Brown Alga Ascophyllum nodosum is Enriched in Macroalgal-Polysaccharide-Degrading Bacteria.

Authors:  Marjolaine Martin; Tristan Barbeyron; Renee Martin; Daniel Portetelle; Gurvan Michel; Micheline Vandenbol
Journal:  Front Microbiol       Date:  2015-12-24       Impact factor: 5.640

Review 9.  Integrated (Meta) Genomic and Synthetic Biology Approaches to Develop New Biocatalysts.

Authors:  María L Parages; José A Gutiérrez-Barranquero; F Jerry Reen; Alan D W Dobson; Fergal O'Gara
Journal:  Mar Drugs       Date:  2016-03-21       Impact factor: 5.118

10.  Novel archaeal thermostable cellulases from an oil reservoir metagenome.

Authors:  Anna Lewin; Jinglie Zhou; Vu Thuy Trang Pham; Tone Haugen; Mohamed El Zeiny; Olav Aarstad; Wolfgang Liebl; Alexander Wentzel; Mark R Liles
Journal:  AMB Express       Date:  2017-09-29       Impact factor: 3.298

  10 in total

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