Literature DB >> 18814017

Characterization and its potential application of two esterases derived from the arctic sediment metagenome.

Jeong Ho Jeon1, Jun-Tae Kim, Sung Gyun Kang, Jung-Hyun Lee, Sang-Jin Kim.   

Abstract

Two esterase genes (designated as estAT1 and estAT11, respectively) were cloned by activity-based screening of a fosmid library constructed with seashore sediment sample of the Arctic. The sequence analysis of the genes revealed that these esterase genes encoded proteins of 303 and 312 amino acids, respectively, and showed 40-50% identities to members of the hormone-sensitive lipase (HSL) family retaining a catalytic triad with a conserved GDSAG sequence and an oxyanion hole (HGGG). The esterases genes were overexpressed in Escherichia coli by co-expressing GroEL-GroES chaperonine, and the recombinant proteins (rEstAT1 and rEstAT11) were purified to homogeneity. The purified EstAT1 and EstAT11 were active in a broad range of temperature from 20 to 40 degrees C with an optimum temperature at 30 degrees C. The activation energies of rEstAT1 and rEstAT11 to hydrolyze p-nitrophenyl esters of butyrate were determined to be 12.65 kcal/mol and 11.26 kcal/mol, respectively, indicating that they are cold-adapted esterases. The purified EstAT1 and EstAT11 could hydrolyze racemic ofloxacin esters, and further rEstAT11 hydrolyzed preferentially (S)-racemic ofloxacin butyl ester with an enantiomeric excess (ee(p)) value of 70.3%. This work represents an example that develops enzymes from the Arctic using metagenomic approach, potentially applicable to chiral resolution of heat-labile substrates.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18814017     DOI: 10.1007/s10126-008-9145-2

Source DB:  PubMed          Journal:  Mar Biotechnol (NY)        ISSN: 1436-2228            Impact factor:   3.619


  44 in total

1.  Bacterial lipolytic enzymes: classification and properties.

Authors:  J L Arpigny; K E Jaeger
Journal:  Biochem J       Date:  1999-10-01       Impact factor: 3.857

Review 2.  Alpha/beta hydrolase fold enzymes: the family keeps growing.

Authors:  M Nardini; B W Dijkstra
Journal:  Curr Opin Struct Biol       Date:  1999-12       Impact factor: 6.809

3.  Discovery of pectin-degrading enzymes and directed evolution of a novel pectate lyase for processing cotton fabric.

Authors:  Arne I Solbak; Toby H Richardson; Ryan T McCann; Katie A Kline; Flash Bartnek; Geoff Tomlinson; Xuqiu Tan; Lilian Parra-Gessert; Gerhard J Frey; Mircea Podar; Peter Luginbühl; Kevin A Gray; Eric J Mathur; Dan E Robertson; Mark J Burk; Geoffrey P Hazlewood; Jay M Short; Janne Kerovuo
Journal:  J Biol Chem       Date:  2004-12-23       Impact factor: 5.157

Review 4.  Metagenomics: application of genomics to uncultured microorganisms.

Authors:  Jo Handelsman
Journal:  Microbiol Mol Biol Rev       Date:  2004-12       Impact factor: 11.056

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

7.  In vitro activity of DR-3355, an optically active ofloxacin.

Authors:  T Une; T Fujimoto; K Sato; Y Osada
Journal:  Antimicrob Agents Chemother       Date:  1988-09       Impact factor: 5.191

8.  Isolation and characterization of a novel lipase from a metagenomic library of tidal flat sediments: evidence for a new family of bacterial lipases.

Authors:  Mi-Hwa Lee; Choong-Hwan Lee; Tae-Kwang Oh; Jae Kwang Song; Jung-Hoon Yoon
Journal:  Appl Environ Microbiol       Date:  2006-09-01       Impact factor: 4.792

9.  Efficient recovery of environmental DNA for expression cloning by indirect extraction methods.

Authors:  Esther M Gabor; Erik J de Vries; Dick B Janssen
Journal:  FEMS Microbiol Ecol       Date:  2003-05-01       Impact factor: 4.194

10.  Cloning and characterization of three epoxide hydrolases from a marine bacterium, Erythrobacter litoralis HTCC2594.

Authors:  Jung-Hee Woo; Young-Ok Hwang; Sung Gyun Kang; Hyun Sook Lee; Jang-Cheon Cho; Sang-Jin Kim
Journal:  Appl Microbiol Biotechnol       Date:  2007-05-31       Impact factor: 4.813

View more
  26 in total

1.  Identification and characterization of a novel cold-adapted esterase from a metagenomic library of mountain soil.

Authors:  Kyong-Cheol Ko; Soon-Ok Rim; Yunjon Han; Bong Seok Shin; Geun-Joong Kim; Jong Hyun Choi; Jae Jun Song
Journal:  J Ind Microbiol Biotechnol       Date:  2012-01-24       Impact factor: 3.346

Review 2.  Metagenomic analyses: past and future trends.

Authors:  Carola Simon; Rolf Daniel
Journal:  Appl Environ Microbiol       Date:  2010-12-17       Impact factor: 4.792

3.  Size Does Matter: Application-driven Approaches for Soil Metagenomics.

Authors:  Kavita S Kakirde; Larissa C Parsley; Mark R Liles
Journal:  Soil Biol Biochem       Date:  2010-11-01       Impact factor: 7.609

4.  Isolation and characterization of a family VII esterase derived from alluvial soil metagenomic library.

Authors:  Weixin Tao; Myung Hwan Lee; Jing Wu; Nam Hee Kim; Seon-Woo Lee
Journal:  J Microbiol       Date:  2011-05-03       Impact factor: 3.422

5.  New member of the hormone-sensitive lipase family from the permafrost microbial community.

Authors:  Lada E Petrovskaya; Ksenia A Novototskaya-Vlasova; Sultan Sh Gapizov; Elena V Spirina; Ekaterina V Durdenko; Elizaveta M Rivkina
Journal:  Bioengineered       Date:  2016-10-18       Impact factor: 3.269

6.  Metagenomics: a quantum jump from bacterial genomics.

Authors:  Puja Gupta; Jyoti Vakhlu
Journal:  Indian J Microbiol       Date:  2011-09-17       Impact factor: 2.461

7.  Identification and characterization of a halotolerant, cold-active marine endo-β-1,4-glucanase by using functional metagenomics of seaweed-associated microbiota.

Authors:  Marjolaine Martin; Sophie Biver; Sébastien Steels; Tristan Barbeyron; Murielle Jam; Daniel Portetelle; Gurvan Michel; Micheline Vandenbol
Journal:  Appl Environ Microbiol       Date:  2014-06-06       Impact factor: 4.792

Review 8.  New extremophilic lipases and esterases from metagenomics.

Authors:  Olalla López-López; Maria E Cerdán; Maria I González Siso
Journal:  Curr Protein Pept Sci       Date:  2014       Impact factor: 3.272

Review 9.  Marine metagenomics: new tools for the study and exploitation of marine microbial metabolism.

Authors:  Jonathan Kennedy; Burkhardt Flemer; Stephen A Jackson; David P H Lejon; John P Morrissey; Fergal O'Gara; Alan D W Dobson
Journal:  Mar Drugs       Date:  2010-03-15       Impact factor: 5.118

10.  Mining the metagenome of activated biomass of an industrial wastewater treatment plant by a novel method.

Authors:  Nandita Sharma; Himgouri Tanksale; Atya Kapley; Hemant J Purohit
Journal:  Indian J Microbiol       Date:  2012-03-25       Impact factor: 2.461

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.