Literature DB >> 11823189

Regulation of endo-acting glycosyl hydrolases in the hyperthermophilic bacterium Thermotoga maritima grown on glucan- and mannan-based polysaccharides.

Swapnil R Chhabra1, Keith R Shockley, Donald E Ward, Robert M Kelly.   

Abstract

The genome sequence of the hyperthermophilic bacterium Thermotoga maritima encodes a number of glycosyl hydrolases. Many of these enzymes have been shown in vitro to degrade specific glycosides that presumably serve as carbon and energy sources for the organism. However, because of the broad substrate specificity of many glycosyl hydrolases, it is difficult to determine the physiological substrate preferences for specific enzymes from biochemical information. In this study, T. maritima was grown on a range of polysaccharides, including barley beta-glucan, carboxymethyl cellulose, carob galactomannan, konjac glucomannan, and potato starch. In all cases, significant growth was observed, and cell densities reached 10(9) cells/ml. Northern blot analyses revealed different substrate-dependent expression patterns for genes encoding the various endo-acting beta-glycosidases; these patterns ranged from strong expression to no expression under the conditions tested. For example, cel74 (TM0305), a gene encoding a putative beta-specific endoglucananse, was strongly expressed on all substrates tested, including starch, while no evidence of expression was observed on any substrate for lam16 (TM0024), xyl10A (TM0061), xyl10B (TM0070), and cel12A (TM1524), which are genes that encode a laminarinase, two xylanases, and an endoglucanase, respectively. The cel12B (TM1525) gene, which encodes an endoglucanase, was expressed only on carboxymethyl cellulose. An extracellular mannanase encoded by man5 (TM1227) was expressed on carob galactomannan and konjac glucomannan and to a lesser extent on carboxymethyl cellulose. An unexpected result was the finding that the cel5A (TM1751) and cel5B (TM1752) genes, which encode putative intracellular beta-specific endoglucanases, were induced only when T. maritima was grown on konjac glucomannan. To investigate the biochemical basis of this finding, the recombinant forms of Man5 (M(r), 76,900) and Cel5A (M(r), 37,400) were expressed in Escherichia coli and characterized. Man5, a T. maritima extracellular enzyme, had a melting temperature of 99 degrees C and an optimun temperature of 90 degrees C, compared to 90 and 80 degrees C, respectively, for the intracellular enzyme Cel5A. While Man5 hydrolyzed both galactomannan and glucomannan, no activity was detected on glucans or xylans. Cel5A, however, not only hydrolyzed barley beta-glucan, carboxymethyl cellulose, xyloglucan, and lichenin but also had activity comparable to that of Man5 on galactomannan and higher activity than Man5 on glucomannan. The biochemical characteristics of Cel5A, the fact that Cel5A was induced only when T. maritima was grown on glucomannan, and the intracellular localization of Cel5A suggest that the physiological role of this enzyme includes hydrolysis of glucomannan oligosaccharides that are transported following initial hydrolysis by extracellular glycosidases, such as Man5.

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Year:  2002        PMID: 11823189      PMCID: PMC126696          DOI: 10.1128/AEM.68.2.545-554.2002

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  47 in total

1.  Classification of glycoside hydrolases and glycosyltransferases from hyperthermophiles.

Authors:  B Henrissat; P M Coutinho
Journal:  Methods Enzymol       Date:  2001       Impact factor: 1.600

2.  Isolation and analysis of a gene encoding alpha-glucuronidase, an enzyme with a novel primary structure involved in the breakdown of xylan.

Authors:  P Ruile; C Winterhalter; W Liebl
Journal:  Mol Microbiol       Date:  1997-01       Impact factor: 3.501

3.  Differential gene expression in Thermotoga neapolitana in response to growth substrate.

Authors:  T N Nguyen; K M Borges; A H Romano; K M Noll
Journal:  FEMS Microbiol Lett       Date:  2001-02-05       Impact factor: 2.742

4.  Purification and characterization of extremely thermostable beta-mannanase, beta-mannosidase, and alpha-galactosidase from the hyperthermophilic eubacterium Thermotoga neapolitana 5068.

Authors:  G D Duffaud; C M McCutchen; P Leduc; K N Parker; R M Kelly
Journal:  Appl Environ Microbiol       Date:  1997-01       Impact factor: 4.792

5.  Molecular and biochemical characterization of an endo-beta-1,3- glucanase of the hyperthermophilic archaeon Pyrococcus furiosus.

Authors:  Y Gueguen; W G Voorhorst; J van der Oost; W M de Vos
Journal:  J Biol Chem       Date:  1997-12-12       Impact factor: 5.157

6.  Relationship between glycosyl hydrolase inventory and growth physiology of the hyperthermophile Pyrococcus furiosus on carbohydrate-based media.

Authors:  L E Driskill; K Kusy; M W Bauer; R M Kelly
Journal:  Appl Environ Microbiol       Date:  1999-03       Impact factor: 4.792

7.  Analysis of a Thermotoga maritima DNA fragment encoding two similar thermostable cellulases, CelA and CelB, and characterization of the recombinant enzymes.

Authors:  W Liebl; P Ruile; K Bronnenmeier; K Riedel; F Lottspeich; I Greif
Journal:  Microbiology       Date:  1996-09       Impact factor: 2.777

Review 8.  The cellulosome: the exocellular organelle of Clostridium.

Authors:  C R Felix; L G Ljungdahl
Journal:  Annu Rev Microbiol       Date:  1993       Impact factor: 15.500

9.  Purification and properties of two truncated endoglucanases produced in Escherichia coli harbouring Clostridium cellulolyticum endoglucanase gene celCCD.

Authors:  S Shima; Y Igarashi; T Kodama
Journal:  Appl Microbiol Biotechnol       Date:  1993-03       Impact factor: 4.813

10.  Purification of Thermotoga maritima enzymes for the degradation of cellulosic materials.

Authors:  K Bronnenmeier; A Kern; W Liebl; W L Staudenbauer
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

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  39 in total

1.  Heat shock response by the hyperthermophilic archaeon Pyrococcus furiosus.

Authors:  Keith R Shockley; Donald E Ward; Swapnil R Chhabra; Shannon B Conners; Clemente I Montero; Robert M Kelly
Journal:  Appl Environ Microbiol       Date:  2003-04       Impact factor: 4.792

2.  Concurrent metabolism of pentose and hexose sugars by the polyextremophile Alicyclobacillus acidocaldarius.

Authors:  Brady D Lee; William A Apel; Linda C DeVeaux; Peter P Sheridan
Journal:  J Ind Microbiol Biotechnol       Date:  2017-08-03       Impact factor: 3.346

3.  Crystal structures of the laminarinase catalytic domain from Thermotoga maritima MSB8 in complex with inhibitors: essential residues for β-1,3- and β-1,4-glucan selection.

Authors:  Wen-Yih Jeng; Nai-Chen Wang; Cheng-Tse Lin; Lie-Fen Shyur; Andrew H-J Wang
Journal:  J Biol Chem       Date:  2011-11-07       Impact factor: 5.157

4.  Tracing determinants of dual substrate specificity in glycoside hydrolase family 5.

Authors:  Zhiwei Chen; Gregory D Friedland; Jose H Pereira; Sonia A Reveco; Rosa Chan; Joshua I Park; Michael P Thelen; Paul D Adams; Adam P Arkin; Jay D Keasling; Harvey W Blanch; Blake A Simmons; Kenneth L Sale; Dylan Chivian; Swapnil R Chhabra
Journal:  J Biol Chem       Date:  2012-05-29       Impact factor: 5.157

5.  Dynamic metabolic adjustments and genome plasticity are implicated in the heat shock response of the extremely thermoacidophilic archaeon Sulfolobus solfataricus.

Authors:  Sabrina Tachdjian; Robert M Kelly
Journal:  J Bacteriol       Date:  2006-06       Impact factor: 3.490

6.  Insertion of endocellulase catalytic domains into thermostable consensus ankyrin scaffolds: effects on stability and cellulolytic activity.

Authors:  Eva S Cunha; Christine L Hatem; Doug Barrick
Journal:  Appl Environ Microbiol       Date:  2013-08-23       Impact factor: 4.792

7.  Uncoupling Fermentative Synthesis of Molecular Hydrogen from Biomass Formation in Thermotoga maritima.

Authors:  Raghuveer Singh; Derrick White; Yaşar Demirel; Robert Kelly; Kenneth Noll; Paul Blum
Journal:  Appl Environ Microbiol       Date:  2018-08-17       Impact factor: 4.792

Review 8.  Thermostable enzymes as biocatalysts in the biofuel industry.

Authors:  Carl J Yeoman; Yejun Han; Dylan Dodd; Charles M Schroeder; Roderick I Mackie; Isaac K O Cann
Journal:  Adv Appl Microbiol       Date:  2010-03-06       Impact factor: 5.086

9.  Contribution of Pentose Catabolism to Molecular Hydrogen Formation by Targeted Disruption of Arabinose Isomerase (araA) in the Hyperthermophilic Bacterium Thermotoga maritima.

Authors:  Derrick White; Raghuveer Singh; Deepak Rudrappa; Jackie Mateo; Levi Kramer; Laura Freese; Paul Blum
Journal:  Appl Environ Microbiol       Date:  2017-02-01       Impact factor: 4.792

10.  Metabolic versatility and indigenous origin of the archaeon Thermococcus sibiricus, isolated from a siberian oil reservoir, as revealed by genome analysis.

Authors:  Andrey V Mardanov; Nikolai V Ravin; Vitali A Svetlitchnyi; Alexey V Beletsky; Margarita L Miroshnichenko; Elizaveta A Bonch-Osmolovskaya; Konstantin G Skryabin
Journal:  Appl Environ Microbiol       Date:  2009-05-15       Impact factor: 4.792

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