Literature DB >> 10493927

Bacterial lipolytic enzymes: classification and properties.

J L Arpigny1, K E Jaeger.   

Abstract

Knowledge of bacterial lipolytic enzymes is increasing at a rapid and exciting rate. To obtain an overview of this industrially very important class of enzymes and their characteristics, we have collected and classified the information available from protein and nucleotide databases. Here we propose an updated and extensive classification of bacterial esterases and lipases based mainly on a comparison of their amino acid sequences and some fundamental biological properties. These new insights result in the identification of eight different families with the largest being further divided into six subfamilies. Moreover, the classification enables us to predict (1) important structural features such as residues forming the catalytic site or the presence of disulphide bonds, (2) types of secretion mechanism and requirement for lipase-specific foldases, and (3) the potential relationship to other enzyme families. This work will therefore contribute to a faster identification and to an easier characterization of novel bacterial lipolytic enzymes.

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Year:  1999        PMID: 10493927      PMCID: PMC1220539     

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  56 in total

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Journal:  Biotechnol Appl Biochem       Date:  1999-04       Impact factor: 2.431

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Journal:  Gene       Date:  1991-06-15       Impact factor: 3.688

Review 3.  Microbial lipases form versatile tools for biotechnology.

Authors:  K E Jaeger; M T Reetz
Journal:  Trends Biotechnol       Date:  1998-09       Impact factor: 19.536

4.  Sequence and comparative analysis of three Enterobacter cloacae ampC beta-lactamase genes and their products.

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Journal:  Biochem J       Date:  1988-03-15       Impact factor: 3.857

5.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

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Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

6.  Purification and substrate specificity of Staphylococcus hyicus lipase.

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Journal:  Biochemistry       Date:  1989-11-28       Impact factor: 3.162

7.  Purification and properties of an Arthrobacter oxydans P52 carbamate hydrolase specific for the herbicide phenmedipham and nucleotide sequence of the corresponding gene.

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Journal:  J Bacteriol       Date:  1992-10       Impact factor: 3.490

Review 8.  Candida rugosa lipases: molecular biology and versatility in biotechnology.

Authors:  S Benjamin; A Pandey
Journal:  Yeast       Date:  1998-09-15       Impact factor: 3.239

9.  Characterization of Pseudomonas fluorescens carboxylesterase: cloning and expression of the esterase gene in Escherichia coli.

Authors:  K H Hong; W H Jang; K D Choi; O J Yoo
Journal:  Agric Biol Chem       Date:  1991-11

Review 10.  Bacterial phospholipases.

Authors:  R W Titball
Journal:  Symp Ser Soc Appl Microbiol       Date:  1998
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  314 in total

1.  A gene encoding an acyl hydrolase is involved in leaf senescence in Arabidopsis.

Authors:  Yuehui He; Susheng Gan
Journal:  Plant Cell       Date:  2002-04       Impact factor: 11.277

2.  AraPerox. A database of putative Arabidopsis proteins from plant peroxisomes.

Authors:  Sigrun Reumann; Changle Ma; Steffen Lemke; Lavanya Babujee
Journal:  Plant Physiol       Date:  2004-08-27       Impact factor: 8.340

Review 3.  Acinetobacter lipases: molecular biology, biochemical properties and biotechnological potential.

Authors:  Erick A Snellman; Rita R Colwell
Journal:  J Ind Microbiol Biotechnol       Date:  2004-09-16       Impact factor: 3.346

4.  A novel β-glucosidase with lipolytic activity from a soil metagenome.

Authors:  Cheng-Jian Jiang; Gao Chen; Jie Huang; Qin Huang; Ke Jin; Pei-Hong Shen; Jun-Fang Li; Bo Wu
Journal:  Folia Microbiol (Praha)       Date:  2011-11-25       Impact factor: 2.099

5.  Preliminary X-ray analysis of twinned crystals of the Q88Y25_Lacpl esterase from Lactobacillus plantarum WCFS1.

Authors:  Yanaisis Álvarez; María Esteban-Torres; Iván Acebrón; Blanca de las Rivas; Rosario Muñoz; Martín Martínez-Ripoll; José M Mancheño
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-10-27

6.  Identification and characterization of a novel cold-adapted esterase from a metagenomic library of mountain soil.

Authors:  Kyong-Cheol Ko; Soon-Ok Rim; Yunjon Han; Bong Seok Shin; Geun-Joong Kim; Jong Hyun Choi; Jae Jun Song
Journal:  J Ind Microbiol Biotechnol       Date:  2012-01-24       Impact factor: 3.346

7.  Unlocking the mystery behind the activation phenomenon of T1 lipase: a molecular dynamics simulations approach.

Authors:  Mohd Zulhilmi Abdul Rahman; Abu Bakar Salleh; Raja Noor Zaliha Raja Abdul Rahman; Mohd Basyaruddin Abdul Rahman; Mahiran Basri; Thean Chor Leow
Journal:  Protein Sci       Date:  2012-07-06       Impact factor: 6.725

Review 8.  New extremophilic lipases and esterases from metagenomics.

Authors:  Olalla López-López; Maria E Cerdán; Maria I González Siso
Journal:  Curr Protein Pept Sci       Date:  2014       Impact factor: 3.272

9.  Influence of N- and/or C-terminal regions on activity, expression, characteristics and structure of lipase from Geobacillus sp. 95.

Authors:  Renata Gudiukaitė; Audrius Gegeckas; Darius Kazlauskas; Donaldas Citavicius
Journal:  Extremophiles       Date:  2013-11-28       Impact factor: 2.395

10.  Identification of a novel esterase from the thermophilic bacterium Geobacillus thermodenitrificans NG80-2.

Authors:  Nicola Curci; Andrea Strazzulli; Federica De Lise; Roberta Iacono; Luisa Maurelli; Fabrizio Dal Piaz; Beatrice Cobucci-Ponzano; Marco Moracci
Journal:  Extremophiles       Date:  2019-05-03       Impact factor: 2.395

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