Literature DB >> 20599513

Biochemical characterization and crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima.

Jose H Pereira1, Zhiwei Chen, Ryan P McAndrew, Rajat Sapra, Swapnil R Chhabra, Kenneth L Sale, Blake A Simmons, Paul D Adams.   

Abstract

Tm_Cel5A, which belongs to family 5 of the glycoside hydrolases, is an extremely stable enzyme among the endo-acting glycosidases present in the hyperthermophilic organism Thermotoga maritima. Members of GH5 family shows a common (β/α)(8) TIM-barrel fold in which the catalytic acid/base and nucleophile are located on strands β-4 and β-7 of the barrel fold. Thermally resistant cellulases are desirable for lignocellulosic biofuels production and the Tm_Cel5A is an excellent candidate for use in the degradation of polysaccharides present on biomass. This paper describes two Tm_Cel5A structures (crystal forms I and II) solved at 2.20 and 1.85Å resolution, respectively. Our analyses of the Tm_Cel5A structure and comparison to a mesophilic GH5 provides a basis for the thermostability associated with Tm_Cel5A. Furthermore, both crystal forms of Tm_Cel5A possess a cadmium (Cd(2+)) ion bound between the two catalytic residues. Activity assays of Tm_Cel5A confirmed a strong inhibition effect in the presence of Cd(2+) metal ions demonstrating competition with the natural substrate for the active site. Based on the structural information we have obtained for Tm_Cel5A, protein bioengineering can be used to potentially increase the thermostability of mesophilic cellulase enzymes. Published by Elsevier Inc.

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Year:  2010        PMID: 20599513     DOI: 10.1016/j.jsb.2010.06.018

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  24 in total

1.  Tracing determinants of dual substrate specificity in glycoside hydrolase family 5.

Authors:  Zhiwei Chen; Gregory D Friedland; Jose H Pereira; Sonia A Reveco; Rosa Chan; Joshua I Park; Michael P Thelen; Paul D Adams; Adam P Arkin; Jay D Keasling; Harvey W Blanch; Blake A Simmons; Kenneth L Sale; Dylan Chivian; Swapnil R Chhabra
Journal:  J Biol Chem       Date:  2012-05-29       Impact factor: 5.157

2.  Chimeric cellulase matrix for investigating intramolecular synergism between non-hydrolytic disruptive functions of carbohydrate-binding modules and catalytic hydrolysis.

Authors:  Yuguo Wang; Rentao Tang; Jin Tao; Xiaonan Wang; Baisong Zheng; Yan Feng
Journal:  J Biol Chem       Date:  2012-07-09       Impact factor: 5.157

3.  Biochemical characterization and structural analysis of a bifunctional cellulase/xylanase from Clostridium thermocellum.

Authors:  Shuo-Fu Yuan; Tzu-Hui Wu; Hsiao-Lin Lee; Han-Yu Hsieh; Wen-Ling Lin; Barbara Yang; Chih-Kang Chang; Qian Li; Jian Gao; Chun-Hsiang Huang; Meng-Chiao Ho; Rey-Ting Guo; Po-Huang Liang
Journal:  J Biol Chem       Date:  2015-01-09       Impact factor: 5.157

4.  The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity toward β-Glucans.

Authors:  Mickael Lafond; Gerlind Sulzenbacher; Thibaud Freyd; Bernard Henrissat; Jean-Guy Berrin; Marie-Line Garron
Journal:  J Biol Chem       Date:  2016-01-11       Impact factor: 5.157

5.  Biochemical characterization of a thermostable endomannanase/endoglucanase from Dictyoglomus turgidum.

Authors:  Francesca Anna Fusco; Raffaele Ronca; Gabriella Fiorentino; Emilia Pedone; Patrizia Contursi; Simonetta Bartolucci; Danila Limauro
Journal:  Extremophiles       Date:  2017-11-25       Impact factor: 2.395

6.  Identification and characterization of a halotolerant, cold-active marine endo-β-1,4-glucanase by using functional metagenomics of seaweed-associated microbiota.

Authors:  Marjolaine Martin; Sophie Biver; Sébastien Steels; Tristan Barbeyron; Murielle Jam; Daniel Portetelle; Gurvan Michel; Micheline Vandenbol
Journal:  Appl Environ Microbiol       Date:  2014-06-06       Impact factor: 4.792

7.  The N-terminal β-sheet of the hyperthermophilic endoglucanase from Pyrococcus horikoshii is critical for thermostability.

Authors:  Trent C Yang; Steve Legault; Emery A Kayiranga; Jyothi Kumaran; Kazuhiko Ishikawa; Wing L Sung
Journal:  Appl Environ Microbiol       Date:  2012-02-17       Impact factor: 4.792

8.  Antarctic tundra soil metagenome as useful natural resources of cold-active lignocelluolytic enzymes.

Authors:  Han Na Oh; Doyoung Park; Hoon Je Seong; Dockyu Kim; Woo Jun Sul
Journal:  J Microbiol       Date:  2019-09-30       Impact factor: 3.422

9.  Substrate binding of a GH5 endoglucanase from the ruminal fungus Piromyces rhizinflata.

Authors:  Chih Wen Tseng; Tzu Ping Ko; Rey Ting Guo; Jian Wen Huang; Hao Ching Wang; Chun Hsiang Huang; Ya Shan Cheng; Andrew H J Wang; Je Ruei Liu
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-09-24

10.  The novel thermostable cellulose-degrading enzyme DtCel5H from Dictyoglomus thermophilum: crystallization and X-ray crystallographic analysis.

Authors:  Flavia Squeglia; Rita Berisio; Alessia Ruggiero
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2018-01-01       Impact factor: 1.056

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