Literature DB >> 24856821

One-pot synthesis of azoline-containing peptides in a cell-free translation system integrated with a posttranslational cyclodehydratase.

Yuki Goto1, Yumi Ito2, Yasuharu Kato3, Shotaro Tsunoda3, Hiroaki Suga4.   

Abstract

Azoline moieties in the backbones of peptidic natural products are important structural motifs that contribute to diverse bioactivities. Some azoline-containing peptides (Az-peptides) are produced from ribosomally synthesized precursor peptides, in which cysteine, serine, and threonine residues are converted to their corresponding azolines by posttranslational modification through a cyclodehydratase. We have devised an in vitro biosynthesis system of Az-peptides, referred to as the FIT-PatD (flexible in vitro translation) system, by the integration of a cell-free translation system with the posttranslational cyclodehydratase PatD. This system enabled the "one-pot" synthesis of a wide variety of Az-peptide derivatives expressed from synthetic DNA templates. The FIT-PatD system also facilitated mutagenesis studies on a wide array of precursor peptide sequences, unveiling unique in vitro substrate tolerance of PatD.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24856821     DOI: 10.1016/j.chembiol.2014.04.008

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  38 in total

1.  Metabolic model for diversity-generating biosynthesis.

Authors:  Ma Diarey Tianero; Elizabeth Pierce; Shrinivasan Raghuraman; Debosmita Sardar; John A McIntosh; John R Heemstra; Zachary Schonrock; Brett C Covington; J Alan Maschek; James E Cox; Brian O Bachmann; Baldomero M Olivera; Duane E Ruffner; Eric W Schmidt
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-01       Impact factor: 11.205

2.  Enzymatic N- and C-Protection in Cyanobactin RiPP Natural Products.

Authors:  Debosmita Sardar; Yue Hao; Zhenjian Lin; Maho Morita; Satish K Nair; Eric W Schmidt
Journal:  J Am Chem Soc       Date:  2017-02-15       Impact factor: 15.419

3.  Identification of an Auxiliary Leader Peptide-Binding Protein Required for Azoline Formation in Ribosomal Natural Products.

Authors:  Kyle L Dunbar; Jonathan I Tietz; Courtney L Cox; Brandon J Burkhart; Douglas A Mitchell
Journal:  J Am Chem Soc       Date:  2015-06-12       Impact factor: 15.419

4.  Directing Biosynthesis: Practical Supply of Natural and Unnatural Cyanobactins.

Authors:  D Sardar; M D Tianero; E W Schmidt
Journal:  Methods Enzymol       Date:  2016-03-16       Impact factor: 1.600

5.  In Vitro Biosynthesis and Substrate Tolerance of the Plantazolicin Family of Natural Products.

Authors:  Caitlin D Deane; Brandon J Burkhart; Patricia M Blair; Jonathan I Tietz; Alice Lin; Douglas A Mitchell
Journal:  ACS Chem Biol       Date:  2016-06-16       Impact factor: 5.100

6.  Exploring the Post-translational Enzymology of PaaA by mRNA Display.

Authors:  Steven R Fleming; Paul M Himes; Swapnil V Ghodge; Yuki Goto; Hiroaki Suga; Albert A Bowers
Journal:  J Am Chem Soc       Date:  2020-03-06       Impact factor: 15.419

7.  Flexizyme-Enabled Benchtop Biosynthesis of Thiopeptides.

Authors:  Steven R Fleming; Tessa E Bartges; Alexander A Vinogradov; Christine L Kirkpatrick; Yuki Goto; Hiroaki Suga; Leslie M Hicks; Albert A Bowers
Journal:  J Am Chem Soc       Date:  2019-01-08       Impact factor: 15.419

Review 8.  New Insights into the Biosynthetic Logic of Ribosomally Synthesized and Post-translationally Modified Peptide Natural Products.

Authors:  Manuel A Ortega; Wilfred A van der Donk
Journal:  Cell Chem Biol       Date:  2016-01-21       Impact factor: 8.116

9.  Three Principles of Diversity-Generating Biosynthesis.

Authors:  Wenjia Gu; Eric W Schmidt
Journal:  Acc Chem Res       Date:  2017-09-11       Impact factor: 22.384

Review 10.  The Biochemistry and Structural Biology of Cyanobactin Pathways: Enabling Combinatorial Biosynthesis.

Authors:  Wenjia Gu; Shi-Hui Dong; Snigdha Sarkar; Satish K Nair; Eric W Schmidt
Journal:  Methods Enzymol       Date:  2018-05-04       Impact factor: 1.600

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