| Literature DB >> 24764912 |
Dhouha Ben Hassen1, Walid Rekik1, Houcine Naïli1, Tadeusz Lis2, Roman Grobelny3.
Abstract
In the crystal structure of the title salt, C7H12N2 (2+)·2NO3 (-), the nitrate ions are located in the vicinity of the protonated amine groups, accepting strong N-H⋯O hydrogen bonds. Each ammonium group is involved in a total of three such inter-actions with neighbouring nitrate ions, generating a three-dimensional network. In addition, there are π-π inter-actions between the aromatic rings of centrosymmetrically related di-ammonium moieties, with a centroid-centroid distance of 3.682 (1) Å.Entities:
Year: 2014 PMID: 24764912 PMCID: PMC3998351 DOI: 10.1107/S1600536814001561
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C7H12N22+·2NO3− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 11810 reflections |
| θ = 3.1–27.5° | |
| µ = 0.14 mm−1 | |
| β = 91.46 (5)° | Prism, brown |
| 0.36 × 0.30 × 0.16 mm | |
| Nonius KappaCCD diffractometer | 2400 independent reflections |
| Radiation source: fine-focus sealed tube | 1617 reflections with |
| Horizontally mounted graphite crystal monochromator | |
| Detector resolution: 9 pixels mm-1 | θmax = 27.5°, θmin = 3.1° |
| CCD rotation images, thick slices scans | |
| Absorption correction: analytical (de Meulenaer & Tompa, 1965) | |
| 11810 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2400 reflections | (Δ/σ)max < 0.001 |
| 179 parameters | Δρmax = 0.28 e Å−3 |
| 0 restraints | Δρmin = −0.23 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.32257 (14) | 0.5382 (2) | 0.04883 (13) | 0.0161 (3) | |
| H11 | 0.330 (2) | 0.416 (3) | 0.0529 (16) | 0.034 (6)* | |
| H12 | 0.3819 (19) | 0.590 (3) | 0.0923 (16) | 0.029 (6)* | |
| H13 | 0.338 (2) | 0.573 (3) | −0.0094 (18) | 0.033 (6)* | |
| N2 | −0.03954 (14) | 0.5320 (2) | 0.27455 (11) | 0.0154 (3) | |
| H21 | 0.0007 (18) | 0.582 (3) | 0.3308 (15) | 0.021 (5)* | |
| H22 | −0.0346 (18) | 0.413 (3) | 0.2809 (14) | 0.023 (5)* | |
| H23 | −0.124 (2) | 0.558 (3) | 0.2749 (15) | 0.031 (5)* | |
| C1 | 0.02007 (15) | 0.5914 (2) | 0.18309 (12) | 0.0143 (3) | |
| C2 | −0.04968 (15) | 0.7016 (2) | 0.11933 (13) | 0.0174 (4) | |
| HC2 | −0.1311 | 0.7390 | 0.1357 | 0.021* | |
| C3 | 0.00273 (15) | 0.7559 (2) | 0.03071 (13) | 0.0189 (4) | |
| HC3 | −0.0441 | 0.8288 | −0.0129 | 0.023* | |
| C4 | 0.12492 (15) | 0.7017 (2) | 0.00712 (13) | 0.0173 (4) | |
| HC4 | 0.1606 | 0.7373 | −0.0522 | 0.021* | |
| C5 | 0.19263 (14) | 0.5937 (2) | 0.07346 (12) | 0.0142 (3) | |
| C6 | 0.14394 (15) | 0.5344 (2) | 0.16332 (12) | 0.0135 (3) | |
| C7 | 0.21965 (15) | 0.4140 (2) | 0.23249 (12) | 0.0160 (3) | |
| H1 | 0.3076 | 0.4499 | 0.2331 | 0.024* | |
| H2 | 0.2124 | 0.2913 | 0.2103 | 0.024* | |
| H3 | 0.1873 | 0.4240 | 0.2982 | 0.024* | |
| O1 | 0.00268 (10) | 0.15667 (16) | 0.30012 (10) | 0.0216 (3) | |
| O2 | −0.18762 (11) | 0.13185 (17) | 0.23748 (9) | 0.0237 (3) | |
| O3 | −0.11592 (13) | −0.06969 (16) | 0.34182 (9) | 0.0260 (3) | |
| N3 | −0.10232 (13) | 0.07181 (18) | 0.29321 (11) | 0.0171 (3) | |
| O4 | 0.37995 (10) | −0.08942 (15) | 0.01918 (9) | 0.0212 (3) | |
| O5 | 0.37031 (11) | 0.17901 (15) | 0.08249 (9) | 0.0203 (3) | |
| O6 | 0.31797 (11) | 0.13625 (18) | −0.07227 (9) | 0.0257 (3) | |
| N4 | 0.35592 (12) | 0.07296 (19) | 0.00802 (10) | 0.0158 (3) |
| N1 | 0.0172 (7) | 0.0150 (8) | 0.0161 (8) | −0.0007 (6) | 0.0037 (6) | 0.0003 (6) |
| N2 | 0.0128 (7) | 0.0164 (8) | 0.0170 (8) | 0.0001 (6) | 0.0014 (6) | 0.0007 (6) |
| C1 | 0.0162 (7) | 0.0126 (7) | 0.0141 (8) | −0.0036 (6) | −0.0002 (6) | −0.0014 (7) |
| C2 | 0.0130 (7) | 0.0157 (8) | 0.0234 (10) | 0.0005 (6) | −0.0016 (7) | 0.0001 (7) |
| C3 | 0.0192 (8) | 0.0159 (8) | 0.0213 (10) | 0.0000 (6) | −0.0063 (7) | 0.0031 (7) |
| C4 | 0.0225 (9) | 0.0149 (8) | 0.0143 (9) | −0.0036 (6) | −0.0013 (7) | 0.0012 (7) |
| C5 | 0.0132 (7) | 0.0118 (8) | 0.0176 (9) | −0.0012 (6) | −0.0010 (6) | −0.0026 (7) |
| C6 | 0.0153 (8) | 0.0098 (7) | 0.0154 (9) | −0.0025 (6) | −0.0023 (6) | −0.0025 (6) |
| C7 | 0.0150 (7) | 0.0155 (8) | 0.0176 (9) | 0.0008 (6) | 0.0019 (6) | 0.0007 (7) |
| O1 | 0.0135 (6) | 0.0183 (6) | 0.0329 (7) | −0.0023 (5) | −0.0030 (5) | 0.0016 (5) |
| O2 | 0.0155 (6) | 0.0332 (7) | 0.0223 (7) | −0.0006 (5) | −0.0038 (5) | 0.0015 (6) |
| O3 | 0.0429 (8) | 0.0146 (6) | 0.0209 (7) | −0.0057 (6) | 0.0086 (6) | 0.0019 (5) |
| N3 | 0.0184 (7) | 0.0156 (7) | 0.0172 (7) | −0.0013 (6) | 0.0025 (6) | −0.0027 (6) |
| O4 | 0.0195 (6) | 0.0116 (6) | 0.0327 (7) | −0.0002 (5) | 0.0041 (5) | −0.0021 (5) |
| O5 | 0.0292 (7) | 0.0166 (6) | 0.0151 (6) | 0.0035 (5) | 0.0002 (5) | −0.0037 (5) |
| O6 | 0.0246 (7) | 0.0360 (8) | 0.0163 (7) | 0.0093 (6) | −0.0041 (5) | 0.0017 (6) |
| N4 | 0.0124 (6) | 0.0170 (7) | 0.0181 (8) | 0.0005 (5) | 0.0014 (5) | −0.0009 (6) |
| N1—C5 | 1.470 (2) | C4—C5 | 1.384 (2) |
| N1—H11 | 0.91 (2) | C4—HC4 | 0.9300 |
| N1—H12 | 0.93 (2) | C5—C6 | 1.398 (2) |
| N1—H13 | 0.85 (2) | C6—C7 | 1.504 (2) |
| N2—C1 | 1.465 (2) | C7—H1 | 0.9600 |
| N2—H21 | 0.94 (2) | C7—H2 | 0.9600 |
| N2—H22 | 0.89 (2) | C7—H3 | 0.9600 |
| N2—H23 | 0.91 (2) | O1—N3 | 1.2703 (17) |
| C1—C2 | 1.382 (2) | O2—N3 | 1.2371 (19) |
| C1—C6 | 1.399 (2) | O3—N3 | 1.2475 (19) |
| C2—C3 | 1.388 (2) | O4—N4 | 1.2388 (18) |
| C2—HC2 | 0.9300 | O5—N4 | 1.2817 (18) |
| C3—C4 | 1.389 (2) | O6—N4 | 1.2367 (18) |
| C3—HC3 | 0.9300 | ||
| C5—N1—H11 | 110.0 (13) | C5—C4—C3 | 118.78 (15) |
| C5—N1—H12 | 110.8 (12) | C5—C4—HC4 | 120.6 |
| H11—N1—H12 | 108.5 (19) | C3—C4—HC4 | 120.6 |
| C5—N1—H13 | 109.0 (15) | C4—C5—C6 | 123.34 (14) |
| H11—N1—H13 | 110 (2) | C4—C5—N1 | 118.67 (15) |
| H12—N1—H13 | 108.4 (19) | C6—C5—N1 | 117.99 (15) |
| C1—N2—H21 | 111.6 (11) | C5—C6—C1 | 115.58 (15) |
| C1—N2—H22 | 110.8 (13) | C5—C6—C7 | 121.71 (14) |
| H21—N2—H22 | 107.1 (18) | C1—C6—C7 | 122.69 (14) |
| C1—N2—H23 | 112.2 (13) | C6—C7—H1 | 109.5 |
| H21—N2—H23 | 109.3 (17) | C6—C7—H2 | 109.5 |
| H22—N2—H23 | 105.5 (18) | H1—C7—H2 | 109.5 |
| C2—C1—C6 | 122.68 (15) | C6—C7—H3 | 109.5 |
| C2—C1—N2 | 118.10 (14) | H1—C7—H3 | 109.5 |
| C6—C1—N2 | 119.22 (15) | H2—C7—H3 | 109.5 |
| C1—C2—C3 | 119.49 (15) | O2—N3—O3 | 122.10 (14) |
| C1—C2—HC2 | 120.3 | O2—N3—O1 | 118.62 (14) |
| C3—C2—HC2 | 120.3 | O3—N3—O1 | 119.27 (14) |
| C2—C3—C4 | 120.11 (16) | O6—N4—O4 | 122.38 (14) |
| C2—C3—HC3 | 119.9 | O6—N4—O5 | 118.82 (14) |
| C4—C3—HC3 | 119.9 | O4—N4—O5 | 118.80 (14) |
| C6—C1—C2—C3 | 1.5 (3) | N1—C5—C6—C1 | 179.86 (14) |
| N2—C1—C2—C3 | −178.15 (15) | C4—C5—C6—C7 | 178.77 (15) |
| C1—C2—C3—C4 | −0.8 (3) | N1—C5—C6—C7 | −1.4 (2) |
| C2—C3—C4—C5 | −0.2 (2) | C2—C1—C6—C5 | −1.1 (2) |
| C3—C4—C5—C6 | 0.6 (2) | N2—C1—C6—C5 | 178.57 (14) |
| C3—C4—C5—N1 | −179.28 (15) | C2—C1—C6—C7 | −179.79 (15) |
| C4—C5—C6—C1 | 0.0 (2) | N2—C1—C6—C7 | −0.2 (2) |
| H··· | ||||
| N1—H11···O5 | 0.91 (2) | 1.85 (2) | 2.746 (2) | 168 (2) |
| N1—H12···O1i | 0.93 (2) | 1.93 (2) | 2.845 (2) | 168 (2) |
| N1—H13···O3ii | 0.85 (2) | 2.07 (2) | 2.891 (2) | 161 (2) |
| N2—H21···O5i | 0.94 (2) | 1.91 (2) | 2.808 (2) | 161 (2) |
| N2—H22···O1 | 0.89 (2) | 1.96 (2) | 2.839 (2) | 172 (2) |
| N2—H23···O2iii | 0.91 (2) | 2.05 (3) | 2.958 (2) | 174 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H11⋯O5 | 0.91 (2) | 1.85 (2) | 2.746 (2) | 168 (2) |
| N1—H12⋯O1i | 0.93 (2) | 1.93 (2) | 2.845 (2) | 168 (2) |
| N1—H13⋯O3ii | 0.85 (2) | 2.07 (2) | 2.891 (2) | 161 (2) |
| N2—H21⋯O5i | 0.94 (2) | 1.91 (2) | 2.808 (2) | 161 (2) |
| N2—H22⋯O1 | 0.89 (2) | 1.96 (2) | 2.839 (2) | 172 (2) |
| N2—H23⋯O2iii | 0.91 (2) | 2.05 (3) | 2.958 (2) | 174 (2) |
Symmetry codes: (i) ; (ii) ; (iii) .