Literature DB >> 22904916

4-[(2-Hy-droxy-benz-yl)amino]-pyridinium nitrate.

Shan Gao, Seik Weng Ng.   

Abstract

The planes of the aromatic rings in the cation of the title salt, C(12)H(13)N(2)O(+)·NO(3) (-), are twisted along the -CH(2)-NH- single bond by 75.3 (1)°. In the crystal, the phenol O, amine N and pyridinium N atoms are hydrogen-bond donors to the O atoms of the nitrate counter-ions. These hydrogen bonds lead to the formation of a layer in the crystal.

Entities:  

Year:  2012        PMID: 22904916      PMCID: PMC3414929          DOI: 10.1107/S1600536812031352

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For 2-[(pyridin-2-yl­amino)­meth­yl]phenol, see: Gao & Ng (2012 ▶). For 2-[(pyridin-3-yl­amino)­meth­yl]phenol, see: Xu et al. (2011 ▶).

Experimental

Crystal data

C12H13N2O+·NO3 M = 263.25 Monoclinic, a = 13.611 (4) Å b = 12.687 (3) Å c = 10.030 (2) Å β = 132.694 (12)° V = 1273.0 (5) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 295 K 0.24 × 0.21 × 0.21 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.975, T max = 0.978 6077 measured reflections 1458 independent reflections 1176 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.116 S = 1.08 1458 reflections 184 parameters 5 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.17 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: CrystalClear (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812031352/xu5582sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812031352/xu5582Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812031352/xu5582Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H13N2O+·NO3Z = 4
Mr = 263.25F(000) = 552
Monoclinic, CcDx = 1.374 Mg m3
Hall symbol: C -2ycMo Kα radiation, λ = 0.71073 Å
a = 13.611 (4) ŵ = 0.11 mm1
b = 12.687 (3) ÅT = 295 K
c = 10.030 (2) ÅPrism, faint yellow
β = 132.694 (12)°0.24 × 0.21 × 0.21 mm
V = 1273.0 (5) Å3
Rigaku R-AXIS RAPID IP diffractometer1458 independent reflections
Radiation source: fine-focus sealed tube1176 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.041
ω scanθmax = 27.5°, θmin = 3.2°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)h = −17→17
Tmin = 0.975, Tmax = 0.978k = −16→16
6077 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.116H atoms treated by a mixture of independent and constrained refinement
S = 1.08w = 1/[σ2(Fo2) + (0.0753P)2] where P = (Fo2 + 2Fc2)/3
1458 reflections(Δ/σ)max = 0.001
184 parametersΔρmax = 0.20 e Å3
5 restraintsΔρmin = −0.17 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
O10.5006 (2)0.17761 (17)0.5005 (3)0.0795 (6)
O20.4295 (3)0.38568 (15)0.3747 (3)0.0882 (7)
O30.3096 (2)0.47126 (17)0.1249 (3)0.0817 (6)
O40.3075 (2)0.30247 (17)0.1215 (3)0.0816 (6)
N10.4372 (3)−0.37774 (19)0.4116 (4)0.0740 (6)
N20.6073 (2)−0.11750 (18)0.7349 (3)0.0692 (6)
N30.3475 (2)0.38556 (18)0.2053 (3)0.0669 (6)
C10.4016 (3)−0.2829 (3)0.3359 (4)0.0739 (7)
H1A0.3378−0.27760.21010.089*
C20.4552 (3)−0.1938 (2)0.4358 (4)0.0660 (6)
H2A0.4293−0.12840.37920.079*
C30.5510 (2)−0.2009 (2)0.6271 (4)0.0588 (6)
C40.5857 (3)−0.3036 (2)0.7024 (4)0.0641 (6)
H40.6484−0.31280.82760.077*
C50.5270 (3)−0.3885 (2)0.5910 (4)0.0720 (7)
H50.5501−0.45570.64110.086*
C60.5830 (3)−0.0101 (2)0.6719 (4)0.0708 (7)
H6A0.5908−0.00600.58280.085*
H6B0.65220.03430.77340.085*
C70.4489 (2)0.03351 (19)0.5886 (3)0.0569 (5)
C80.3625 (3)−0.0166 (2)0.5960 (4)0.0650 (6)
H80.3879−0.08000.65840.078*
C90.2390 (3)0.0260 (3)0.5123 (5)0.0784 (8)
H90.1825−0.00780.52010.094*
C100.2006 (3)0.1180 (3)0.4180 (6)0.0834 (9)
H100.11640.14560.35840.100*
C110.2847 (3)0.1707 (2)0.4096 (4)0.0742 (7)
H110.25780.23360.34560.089*
C120.4100 (3)0.12908 (19)0.4978 (3)0.0607 (6)
H10.477 (4)0.2368 (14)0.450 (4)0.082 (9)*
H20.670 (3)−0.126 (3)0.8524 (16)0.081 (10)*
H30.400 (3)−0.4320 (18)0.337 (4)0.081 (10)*
U11U22U33U12U13U23
O10.0804 (12)0.0576 (10)0.1069 (16)0.0045 (9)0.0660 (12)0.0162 (10)
O20.1108 (18)0.0634 (12)0.0670 (14)−0.0060 (11)0.0509 (14)−0.0011 (9)
O30.0915 (14)0.0660 (12)0.0782 (13)0.0112 (10)0.0539 (12)0.0097 (10)
O40.0855 (13)0.0665 (12)0.0805 (13)−0.0092 (10)0.0514 (12)−0.0138 (9)
N10.0745 (14)0.0683 (15)0.0895 (17)−0.0068 (12)0.0597 (14)−0.0155 (13)
N20.0629 (13)0.0570 (13)0.0657 (14)0.0038 (9)0.0349 (12)0.0069 (10)
N30.0683 (12)0.0654 (15)0.0713 (14)0.0001 (10)0.0490 (12)−0.0010 (10)
C10.0661 (15)0.0879 (19)0.0658 (15)0.0049 (14)0.0440 (13)−0.0032 (14)
C20.0633 (14)0.0672 (15)0.0679 (15)0.0097 (12)0.0446 (13)0.0088 (12)
C30.0562 (12)0.0546 (13)0.0682 (15)0.0055 (10)0.0432 (13)0.0058 (10)
C40.0664 (15)0.0564 (14)0.0701 (15)0.0080 (11)0.0465 (13)0.0094 (11)
C50.0798 (17)0.0559 (15)0.095 (2)0.0059 (12)0.0648 (17)0.0061 (13)
C60.0637 (13)0.0531 (14)0.0834 (17)−0.0003 (11)0.0450 (13)0.0036 (12)
C70.0619 (13)0.0460 (11)0.0593 (12)−0.0046 (9)0.0397 (11)−0.0073 (9)
C80.0780 (15)0.0521 (12)0.0761 (15)−0.0087 (12)0.0566 (13)−0.0094 (11)
C90.0841 (18)0.0707 (18)0.108 (2)−0.0118 (14)0.0759 (19)−0.0190 (16)
C100.0751 (17)0.075 (2)0.112 (2)0.0063 (14)0.0680 (19)−0.0095 (17)
C110.0767 (16)0.0611 (15)0.0868 (19)0.0102 (12)0.0562 (16)0.0047 (12)
C120.0665 (13)0.0504 (13)0.0675 (14)−0.0021 (11)0.0463 (12)−0.0055 (10)
O1—C121.362 (3)C4—C51.354 (4)
O1—H10.837 (10)C4—H40.9300
O2—N31.250 (3)C5—H50.9300
O3—N31.238 (3)C6—C71.505 (4)
O4—N31.222 (3)C6—H6A0.9700
N1—C11.327 (4)C6—H6B0.9700
N1—C51.330 (4)C7—C81.383 (4)
N1—H30.882 (10)C7—C121.388 (3)
N2—C31.324 (4)C8—C91.381 (4)
N2—C61.443 (3)C8—H80.9300
N2—H20.874 (10)C9—C101.364 (5)
C1—C21.350 (4)C9—H90.9300
C1—H1A0.9300C10—C111.376 (5)
C2—C31.413 (4)C10—H100.9300
C2—H2A0.9300C11—C121.387 (4)
C3—C41.418 (3)C11—H110.9300
C12—O1—H1115 (3)N2—C6—C7115.0 (2)
C1—N1—C5120.7 (3)N2—C6—H6A108.5
C1—N1—H3116 (2)C7—C6—H6A108.5
C5—N1—H3123 (2)N2—C6—H6B108.5
C3—N2—C6124.3 (2)C7—C6—H6B108.5
C3—N2—H2120 (2)H6A—C6—H6B107.5
C6—N2—H2116 (2)C8—C7—C12118.5 (2)
O4—N3—O3121.0 (2)C8—C7—C6123.8 (2)
O4—N3—O2120.5 (2)C12—C7—C6117.7 (2)
O3—N3—O2118.5 (2)C9—C8—C7121.1 (3)
N1—C1—C2122.0 (3)C9—C8—H8119.5
N1—C1—H1A119.0C7—C8—H8119.5
C2—C1—H1A119.0C10—C9—C8119.5 (3)
C1—C2—C3119.5 (3)C10—C9—H9120.2
C1—C2—H2A120.3C8—C9—H9120.2
C3—C2—H2A120.3C9—C10—C11121.0 (3)
N2—C3—C2123.3 (2)C9—C10—H10119.5
N2—C3—C4120.1 (2)C11—C10—H10119.5
C2—C3—C4116.7 (2)C10—C11—C12119.3 (3)
C5—C4—C3119.6 (3)C10—C11—H11120.3
C5—C4—H4120.2C12—C11—H11120.3
C3—C4—H4120.2O1—C12—C11123.0 (2)
N1—C5—C4121.5 (3)O1—C12—C7116.4 (2)
N1—C5—H5119.3C11—C12—C7120.6 (2)
C4—C5—H5119.3
C5—N1—C1—C20.8 (4)N2—C6—C7—C12−169.2 (2)
N1—C1—C2—C3−0.8 (4)C12—C7—C8—C91.3 (4)
C6—N2—C3—C2−2.9 (4)C6—C7—C8—C9−178.1 (3)
C6—N2—C3—C4177.4 (2)C7—C8—C9—C101.2 (4)
C1—C2—C3—N2−179.3 (3)C8—C9—C10—C11−2.0 (5)
C1—C2—C3—C40.5 (3)C9—C10—C11—C120.3 (5)
N2—C3—C4—C5179.6 (3)C10—C11—C12—O1−178.2 (3)
C2—C3—C4—C5−0.1 (3)C10—C11—C12—C72.1 (4)
C1—N1—C5—C4−0.4 (4)C8—C7—C12—O1177.4 (2)
C3—C4—C5—N10.1 (4)C6—C7—C12—O1−3.2 (3)
C3—N2—C6—C773.7 (4)C8—C7—C12—C11−2.9 (3)
N2—C6—C7—C810.2 (4)C6—C7—C12—C11176.5 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···O20.84 (2)1.97 (2)2.800 (3)169 (4)
N1—H3···O2i0.88 (3)2.33 (2)3.017 (3)134 (2)
N1—H3···O3i0.88 (3)2.00 (3)2.860 (4)165 (3)
N2—H2···O3ii0.88 (1)2.36 (2)3.089 (3)141 (3)
N2—H2···O4ii0.88 (1)2.18 (2)3.027 (3)162 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯O20.84 (2)1.97 (2)2.800 (3)169 (4)
N1—H3⋯O2i 0.88 (3)2.33 (2)3.017 (3)134 (2)
N1—H3⋯O3i 0.88 (3)2.00 (3)2.860 (4)165 (3)
N2—H2⋯O3ii 0.88 (1)2.36 (2)3.089 (3)141 (3)
N2—H2⋯O4ii 0.88 (1)2.18 (2)3.027 (3)162 (3)

Symmetry codes: (i) ; (ii) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-[(Pyridin-3-yl-amino)-meth-yl]phenol.

Authors:  Jing Xu; Shan Gao; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-12

3.  2-{[(Pyridin-2-yl)amino]-meth-yl}phenol.

Authors:  Shan Gao; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-18
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1.  2-Methyl-benzene-1,3-di-ammonium dinitrate.

Authors:  Dhouha Ben Hassen; Walid Rekik; Houcine Naïli; Tadeusz Lis; Roman Grobelny
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