Literature DB >> 24764845

Ethyl 2-{5-[(3-oxo-3,4-di-hydro-2H-1,4-benzo-thia-zin-4-yl)meth-yl]-1H-1,2,3-triazol-1-yl}acetate.

Nada Kheira Sebbar1, Abdelfettah Zerzouf2, El Mokhtar Essassi1, Mohamed Saadi3, Lahcen El Ammari3.   

Abstract

In the title compound, C15H16N4O3S, the six-membered heterocycle of the benzo-thia-zine fragment exhibits a screw boat conformation. The dihedral angle between the planes through the triazole ring and the benzene ring fused to the 1,4-thia-zine ring is 62.98 (11)°. The mean plane formed by the atoms belonging to the acetate group is nearly perpendicular to the triazole ring [dihedral angle = 74.65 (12)°]. In the crystal, mol-ecules are linked by pairs of C-H⋯O inter-actions, forming dimeric aggregates.

Entities:  

Year:  2014        PMID: 24764845      PMCID: PMC3998284          DOI: 10.1107/S1600536813034697

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of benzo­thia­zine derivatives, see: Fringuelli et al. (1998 ▶); Lopatina et al. (1982 ▶); Rathore & Kumar (2006 ▶). For related structures, see: Keita et al. (2000 ▶); Zerzouf et al. (2001 ▶); Barryala et al. (2011 ▶). For puckering calculation see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C15H16N4O3S M = 332.38 Triclinic, a = 5.6414 (2) Å b = 11.1604 (4) Å c = 13.3724 (5) Å α = 73.823 (2)° β = 87.226 (2)° γ = 88.566 (2)° V = 807.59 (5) Å3 Z = 2 Mo Kα radiation μ = 0.22 mm−1 T = 296 K 0.37 × 0.34 × 0.28 mm

Data collection

Bruker X8 APEX diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.692, T max = 0.747 16305 measured reflections 3560 independent reflections 2963 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.124 S = 1.05 3560 reflections 208 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.32 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536813034697/tk5283sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813034697/tk5283Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536813034697/tk5283Isup3.cml CCDC reference: Additional supporting information: crystallographic information; 3D view; checkCIF report
C15H16N4O3SZ = 2
Mr = 332.38F(000) = 348
Triclinic, P1Dx = 1.367 Mg m3
a = 5.6414 (2) ÅMo Kα radiation, λ = 0.71073 Å
b = 11.1604 (4) ÅCell parameters from 3560 reflections
c = 13.3724 (5) Åθ = 2.8–27.1°
α = 73.823 (2)°µ = 0.22 mm1
β = 87.226 (2)°T = 296 K
γ = 88.566 (2)°Block, yellow
V = 807.59 (5) Å30.37 × 0.34 × 0.28 mm
Bruker X8 APEX diffractometer3560 independent reflections
Radiation source: fine-focus sealed tube2963 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
φ and ω scansθmax = 27.1°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −7→7
Tmin = 0.692, Tmax = 0.747k = −14→14
16305 measured reflectionsl = −17→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.124H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0523P)2 + 0.3602P] where P = (Fo2 + 2Fc2)/3
3560 reflections(Δ/σ)max < 0.001
208 parametersΔρmax = 0.39 e Å3
0 restraintsΔρmin = −0.32 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against all reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on all data will be even larger.
xyzUiso*/Ueq
C10.0414 (3)0.32734 (16)0.35494 (13)0.0404 (4)
C2−0.1005 (4)0.43140 (19)0.35277 (16)0.0584 (5)
H2−0.10860.49600.29160.070*
C3−0.2296 (5)0.4392 (3)0.4410 (2)0.0816 (8)
H3−0.32260.50970.43910.098*
C4−0.2224 (5)0.3437 (3)0.5320 (2)0.0848 (8)
H4−0.31300.34880.59070.102*
C5−0.0814 (4)0.2415 (3)0.53555 (16)0.0681 (6)
H5−0.07550.17750.59720.082*
C60.0537 (3)0.23176 (18)0.44807 (14)0.0469 (4)
C70.4681 (3)0.1852 (2)0.36729 (17)0.0589 (5)
H7A0.53600.24440.39860.071*
H7B0.59270.12720.35810.071*
C80.3767 (3)0.25404 (16)0.26244 (15)0.0435 (4)
C90.0720 (3)0.38039 (16)0.16053 (13)0.0386 (4)
H9A−0.09990.37670.16590.046*
H9B0.12680.33620.11060.046*
C100.1439 (3)0.51384 (15)0.12016 (12)0.0351 (3)
C110.3619 (3)0.56739 (15)0.10351 (14)0.0399 (4)
H110.50900.52740.11390.048*
C120.4837 (3)0.79233 (16)0.04712 (13)0.0422 (4)
H12A0.40780.86770.00590.051*
H12B0.61990.77370.00660.051*
C130.5656 (4)0.81404 (19)0.14565 (15)0.0498 (4)
C140.8094 (7)0.9430 (4)0.2083 (2)0.1208 (14)
H14A0.69530.97960.24820.145*
H14B0.86690.86530.25410.145*
C150.9975 (6)1.0233 (3)0.1746 (3)0.1089 (12)
H15A1.06931.03800.23370.163*
H15B0.94121.10100.13030.163*
H15C1.11280.98670.13640.163*
N10.1656 (2)0.31606 (12)0.26288 (10)0.0359 (3)
N2−0.0215 (3)0.60571 (14)0.09455 (13)0.0471 (4)
N30.0854 (3)0.71393 (14)0.06368 (13)0.0486 (4)
N40.3184 (2)0.69022 (13)0.06899 (11)0.0380 (3)
O10.4877 (3)0.25525 (15)0.18177 (12)0.0619 (4)
O20.5302 (4)0.7457 (2)0.23075 (13)0.1013 (8)
O30.6924 (3)0.91691 (13)0.12300 (11)0.0560 (4)
S10.23551 (10)0.10089 (5)0.45316 (4)0.06117 (19)
U11U22U33U12U13U23
C10.0407 (9)0.0437 (9)0.0341 (8)−0.0073 (7)0.0014 (7)−0.0060 (7)
C20.0686 (13)0.0517 (11)0.0476 (11)0.0061 (10)0.0149 (10)−0.0052 (9)
C30.097 (2)0.0739 (16)0.0688 (16)0.0123 (14)0.0299 (14)−0.0176 (13)
C40.098 (2)0.104 (2)0.0478 (13)0.0025 (17)0.0262 (13)−0.0187 (13)
C50.0732 (15)0.0872 (17)0.0330 (10)−0.0082 (13)0.0021 (10)0.0015 (10)
C60.0438 (9)0.0539 (10)0.0369 (9)−0.0068 (8)−0.0049 (7)−0.0015 (8)
C70.0386 (10)0.0640 (13)0.0608 (13)0.0032 (9)−0.0069 (9)0.0052 (10)
C80.0369 (9)0.0409 (9)0.0481 (10)−0.0043 (7)−0.0002 (7)−0.0046 (7)
C90.0370 (8)0.0419 (9)0.0338 (8)−0.0049 (7)−0.0042 (6)−0.0049 (7)
C100.0326 (8)0.0403 (8)0.0291 (8)0.0007 (6)−0.0027 (6)−0.0039 (6)
C110.0327 (8)0.0367 (8)0.0453 (9)0.0027 (6)−0.0022 (7)−0.0031 (7)
C120.0479 (10)0.0376 (8)0.0360 (9)−0.0069 (7)−0.0020 (7)−0.0014 (7)
C130.0559 (11)0.0526 (11)0.0380 (10)−0.0085 (9)−0.0009 (8)−0.0073 (8)
C140.153 (3)0.155 (3)0.0655 (18)−0.077 (3)−0.0210 (19)−0.039 (2)
C150.117 (3)0.116 (3)0.096 (2)−0.047 (2)−0.038 (2)−0.0240 (19)
N10.0348 (7)0.0363 (7)0.0326 (7)−0.0022 (5)−0.0014 (5)−0.0028 (5)
N20.0332 (7)0.0468 (8)0.0536 (9)0.0020 (6)−0.0060 (6)−0.0009 (7)
N30.0394 (8)0.0432 (8)0.0555 (10)0.0059 (6)−0.0070 (7)−0.0008 (7)
N40.0358 (7)0.0362 (7)0.0368 (7)−0.0004 (5)−0.0022 (5)−0.0018 (6)
O10.0508 (8)0.0707 (10)0.0586 (9)0.0096 (7)0.0109 (7)−0.0119 (7)
O20.1505 (19)0.1102 (15)0.0355 (9)−0.0617 (14)−0.0002 (10)−0.0028 (9)
O30.0673 (9)0.0560 (8)0.0456 (8)−0.0148 (7)−0.0102 (6)−0.0131 (6)
S10.0544 (3)0.0533 (3)0.0578 (3)−0.0006 (2)−0.0062 (2)0.0150 (2)
C1—C21.388 (3)C9—H9B0.9700
C1—C61.399 (2)C10—N21.351 (2)
C1—N11.421 (2)C10—C111.362 (2)
C2—C31.379 (3)C11—N41.339 (2)
C2—H20.9300C11—H110.9300
C3—C41.378 (4)C12—N41.448 (2)
C3—H30.9300C12—C131.500 (3)
C4—C51.365 (4)C12—H12A0.9700
C4—H40.9300C12—H12B0.9700
C5—C61.394 (3)C13—O21.191 (2)
C5—H50.9300C13—O31.322 (2)
C6—S11.751 (2)C14—C151.381 (4)
C7—C81.507 (3)C14—O31.446 (3)
C7—S11.800 (2)C14—H14A0.9700
C7—H7A0.9700C14—H14B0.9700
C7—H7B0.9700C15—H15A0.9600
C8—O11.217 (2)C15—H15B0.9600
C8—N11.363 (2)C15—H15C0.9600
C9—N11.473 (2)N2—N31.314 (2)
C9—C101.495 (2)N3—N41.335 (2)
C9—H9A0.9700
C2—C1—C6119.07 (17)C11—C10—C9131.21 (15)
C2—C1—N1120.41 (15)N4—C11—C10104.97 (14)
C6—C1—N1120.48 (17)N4—C11—H11127.5
C3—C2—C1120.2 (2)C10—C11—H11127.5
C3—C2—H2119.9N4—C12—C13111.39 (14)
C1—C2—H2119.9N4—C12—H12A109.4
C4—C3—C2120.8 (2)C13—C12—H12A109.4
C4—C3—H3119.6N4—C12—H12B109.4
C2—C3—H3119.6C13—C12—H12B109.4
C5—C4—C3119.6 (2)H12A—C12—H12B108.0
C5—C4—H4120.2O2—C13—O3125.37 (19)
C3—C4—H4120.2O2—C13—C12124.90 (19)
C4—C5—C6120.9 (2)O3—C13—C12109.65 (15)
C4—C5—H5119.5C15—C14—O3112.4 (3)
C6—C5—H5119.5C15—C14—H14A109.1
C5—C6—C1119.4 (2)O3—C14—H14A109.1
C5—C6—S1120.78 (16)C15—C14—H14B109.1
C1—C6—S1119.84 (15)O3—C14—H14B109.1
C8—C7—S1111.53 (13)H14A—C14—H14B107.8
C8—C7—H7A109.3C14—C15—H15A109.5
S1—C7—H7A109.3C14—C15—H15B109.5
C8—C7—H7B109.3H15A—C15—H15B109.5
S1—C7—H7B109.3C14—C15—H15C109.5
H7A—C7—H7B108.0H15A—C15—H15C109.5
O1—C8—N1121.92 (17)H15B—C15—H15C109.5
O1—C8—C7121.56 (17)C8—N1—C1123.85 (14)
N1—C8—C7116.51 (16)C8—N1—C9116.72 (14)
N1—C9—C10113.91 (13)C1—N1—C9119.33 (14)
N1—C9—H9A108.8N3—N2—C10109.05 (14)
C10—C9—H9A108.8N2—N3—N4106.88 (14)
N1—C9—H9B108.8N3—N4—C11111.00 (14)
C10—C9—H9B108.8N3—N4—C12119.89 (14)
H9A—C9—H9B107.7C11—N4—C12128.89 (14)
N2—C10—C11108.10 (14)C13—O3—C14116.59 (19)
N2—C10—C9120.68 (14)C6—S1—C795.49 (10)
D—H···AD—HH···AD···AD—H···A
C4—H4···O2i0.932.593.445 (3)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C4—H4⋯O2i 0.932.593.445 (3)154

Symmetry code: (i) .

  6 in total

1.  2-Acetyl-4H-benzothiazin-3(2H)-one.

Authors:  A Keita; N Ahabchane; E M Essassi; M Pierrot
Journal:  Acta Crystallogr C       Date:  2000-05-15       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Azole derivatives of 1,4-benzothiazine as antifungal agents.

Authors:  R Fringuelli; F Schiaffella; F Bistoni; L Pitzurra; A Vecchiarelli
Journal:  Bioorg Med Chem       Date:  1998-01       Impact factor: 3.641

4.  Synthesis of 7-chloro-5-trifluoromethyl/7-fluoro/7-trifluoromethyl-4H-1,4-benzothiazines as antimicrobial agents.

Authors:  Bhawani Singh Rathore; M Kumar
Journal:  Bioorg Med Chem       Date:  2006-05-02       Impact factor: 3.641

5.  Methyl 2-(3-oxo-3,4-dihydro-2H-1,4-benzothia-zin-4-yl)acetate.

Authors:  Yamna Barryala; Stéphane Massip; Saïd Lazar; El Mokhtar Essassi; Hafid Zouihri
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-26

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total
  3 in total

1.  4-[(1-Benzyl-1H-1,2,3-triazol-4-yl)meth-yl]-2H-1,4-benzo-thia-zin-3(4H)-one.

Authors:  Nada Kheira Sebbar; Abdelfettah Zerzouf; El Mokhtar Essassi; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-01-18

2.  (2Z)-2-Benzyl-idene-4-(prop-2-yn-1-yl)-2H-1,4-benzo-thia-zin-3(4H)-one.

Authors:  Nada Kheira Sebbar; Abdelfettah Zerzouf; El Mokhtar Essassi; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-04-26

3.  Crystal structure and Hirshfeld surface analysis of ethyl 2-{4-[(3-methyl-2-oxo-1,2-di-hydro-quinoxalin-1-yl)meth-yl]-1H-1,2,3-triazol-1-yl}acetate.

Authors:  Nadeem Abad; Youssef Ramli; Tuncer Hökelek; Nada Kheira Sebbar; Joel T Mague; El Mokhtar Essassi
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2018-10-23
  3 in total

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