Literature DB >> 24723100

Isolation and characterization of novel lipase gene LipHim1 from the DNA isolated from soil samples.

Pavan Kumar Pindi1, Raja Srinath R, Theetha L Pavankumar.   

Abstract

Metagenomics is a magnificent tool to isolate genes from unknown/uncharacterized species and also from organisms that cannot be cultured. In this study, we constructed a metagenomic library from isolated DNA of soil samples collected from Palamuru University campus premises, in Mahabubnagar district of Andhra Pradesh, India. We isolated a novel lipase gene LipHim1, which has an open reading frame of 591 base pairs and encodes ∼23 kDa protein consisting of 196 amino acids. The Lipase LipHim1 showed maximum 32% homology at the protein level with the extracellular Aeromonas hydrophila lipase (Class II, GDSL family) and was significantly different from all other known lipases. The isolated lipase catalyzed the hydrolysis of fatty acid esters of polyoxyethylene sorbitan such as Tween 60. Our results indicate that the isolated lipase gene is novel.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 24723100     DOI: 10.1007/s12275-014-3302-2

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  15 in total

1.  Bacterial lipolytic enzymes: classification and properties.

Authors:  J L Arpigny; K E Jaeger
Journal:  Biochem J       Date:  1999-10-01       Impact factor: 3.857

2.  Prospecting for novel biocatalysts in a soil metagenome.

Authors:  S Voget; C Leggewie; A Uesbeck; C Raasch; K-E Jaeger; W R Streit
Journal:  Appl Environ Microbiol       Date:  2003-10       Impact factor: 4.792

Review 3.  Bacterial lipases: an overview of production, purification and biochemical properties.

Authors:  R Gupta; N Gupta; P Rathi
Journal:  Appl Microbiol Biotechnol       Date:  2004-02-14       Impact factor: 4.813

Review 4.  Metagenomics: application of genomics to uncultured microorganisms.

Authors:  Jo Handelsman
Journal:  Microbiol Mol Biol Rev       Date:  2004-12       Impact factor: 11.056

Review 5.  Metagenomics and industrial applications.

Authors:  Patrick Lorenz; Jürgen Eck
Journal:  Nat Rev Microbiol       Date:  2005-06       Impact factor: 60.633

Review 6.  Metagenomics, biotechnology with non-culturable microbes.

Authors:  Christel Schmeisser; Helen Steele; Wolfgang R Streit
Journal:  Appl Microbiol Biotechnol       Date:  2007-03-30       Impact factor: 4.813

7.  High diversity in DNA of soil bacteria.

Authors:  V Torsvik; J Goksøyr; F L Daae
Journal:  Appl Environ Microbiol       Date:  1990-03       Impact factor: 4.792

8.  Screening of environmental DNA libraries for the presence of genes conferring lipolytic activity on Escherichia coli.

Authors:  A Henne; R A Schmitz; M Bömeke; G Gottschalk; R Daniel
Journal:  Appl Environ Microbiol       Date:  2000-07       Impact factor: 4.792

Review 9.  Bacterial biocatalysts: molecular biology, three-dimensional structures, and biotechnological applications of lipases.

Authors:  K E Jaeger; B W Dijkstra; M T Reetz
Journal:  Annu Rev Microbiol       Date:  1999       Impact factor: 15.500

10.  New thermophilic and thermostable esterase with sequence similarity to the hormone-sensitive lipase family, cloned from a metagenomic library.

Authors:  Jin-Kyu Rhee; Dae-Gyun Ahn; Yeon-Gu Kim; Jong-Won Oh
Journal:  Appl Environ Microbiol       Date:  2005-02       Impact factor: 4.792

View more
  1 in total

Review 1.  Integrative computational approach for genome-based study of microbial lipid-degrading enzymes.

Authors:  Tayvich Vorapreeda; Chinae Thammarongtham; Kobkul Laoteng
Journal:  World J Microbiol Biotechnol       Date:  2016-06-04       Impact factor: 3.312

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.