Literature DB >> 15691936

New thermophilic and thermostable esterase with sequence similarity to the hormone-sensitive lipase family, cloned from a metagenomic library.

Jin-Kyu Rhee1, Dae-Gyun Ahn, Yeon-Gu Kim, Jong-Won Oh.   

Abstract

A gene coding for a thermostable esterase was isolated by functional screening of Escherichia coli cells that had been transformed with fosmid environmental DNA libraries constructed with metagenomes from thermal environmental samples. The gene conferring esterase activity on E. coli grown on tributyrin agar was composed of 936 bp, corresponding to 311 amino acid residues with a molecular mass of 34 kDa. The enzyme showed significant amino acid similarity (64%) to the enzyme from a hyperthermophilic archaeon, Pyrobaculum calidifontis. An amino acid sequence comparison with other esterases and lipases revealed that the enzyme should be classified as a new member of the hormone-sensitive lipase family. The recombinant esterase that was overexpressed and purified from E. coli was active above 30 degrees C up to 95 degrees C and had a high thermal stability. It displayed a high degree of activity in a pH range of 5.5 to 7.5, with an optimal pH of approximately 6.0. The best substrate for the enzyme among the p-nitrophenyl esters (C(4) to C(16)) examined was p-nitrophenyl caproate (C(6)), and no lipolytic activity was observed with esters containing an acyl chain length of longer than 10 carbon atoms, indicating that the enzyme is an esterase and not a lipase.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15691936      PMCID: PMC546692          DOI: 10.1128/AEM.71.2.817-825.2005

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  43 in total

1.  Cloning the soil metagenome: a strategy for accessing the genetic and functional diversity of uncultured microorganisms.

Authors:  M R Rondon; P R August; A D Bettermann; S F Brady; T H Grossman; M R Liles; K A Loiacono; B A Lynch; I A MacNeil; C Minor; C L Tiong; M Gilman; M S Osburne; J Clardy; J Handelsman; R M Goodman
Journal:  Appl Environ Microbiol       Date:  2000-06       Impact factor: 4.792

2.  Bacterial community analysis of Indonesian hot springs.

Authors:  G C Baker; S Gaffar; D A Cowan; A R Suharto
Journal:  FEMS Microbiol Lett       Date:  2001-06-12       Impact factor: 2.742

3.  MEGA2: molecular evolutionary genetics analysis software.

Authors:  S Kumar; K Tamura; I B Jakobsen; M Nei
Journal:  Bioinformatics       Date:  2001-12       Impact factor: 6.937

4.  Prospecting for novel lipase genes using PCR.

Authors:  Philip J L Bell; Anwar Sunna; Moreland D Gibbs; Natalie C Curach; Helena Nevalainen; Peter L Bergquist
Journal:  Microbiology       Date:  2002-08       Impact factor: 2.777

5.  Residues at the active site of the esterase 2 from Alicyclobacillus acidocaldarius involved in substrate specificity and catalytic activity at high temperature.

Authors:  G Manco; L Mandrich; M Rossi
Journal:  J Biol Chem       Date:  2001-07-10       Impact factor: 5.157

6.  Cloning, overexpression, and properties of a new thermophilic and thermostable esterase with sequence similarity to hormone-sensitive lipase subfamily from the archaeon Archaeoglobus fulgidus.

Authors:  G Manco; E Giosuè; S D'Auria; P Herman; G Carrea; M Rossi
Journal:  Arch Biochem Biophys       Date:  2000-01-01       Impact factor: 4.013

7.  Direct cloning from enrichment cultures, a reliable strategy for isolation of complete operons and genes from microbial consortia.

Authors:  P Entcheva; W Liebl; A Johann; T Hartsch; W R Streit
Journal:  Appl Environ Microbiol       Date:  2001-01       Impact factor: 4.792

8.  A carboxylesterase from the hyperthermophilic archaeon Sulfolobus solfataricus: cloning of the gene, characterization of the protein.

Authors:  Alessandra Morana; Natascia Di Prizito; Vincenzo Aurilia; Mosè Rossi; Raffaele Cannio
Journal:  Gene       Date:  2002-01-23       Impact factor: 3.688

9.  A snapshot of a transition state analogue of a novel thermophilic esterase belonging to the subfamily of mammalian hormone-sensitive lipase.

Authors:  G De Simone; S Galdiero; G Manco; D Lang; M Rossi; C Pedone
Journal:  J Mol Biol       Date:  2000-11-10       Impact factor: 5.469

10.  Extremely stable and versatile carboxylesterase from a hyperthermophilic archaeon.

Authors:  Yuji Hotta; Satoshi Ezaki; Haruyuki Atomi; Tadayuki Imanaka
Journal:  Appl Environ Microbiol       Date:  2002-08       Impact factor: 4.792

View more
  70 in total

1.  Identification and characterization of a novel cold-adapted esterase from a metagenomic library of mountain soil.

Authors:  Kyong-Cheol Ko; Soon-Ok Rim; Yunjon Han; Bong Seok Shin; Geun-Joong Kim; Jong Hyun Choi; Jae Jun Song
Journal:  J Ind Microbiol Biotechnol       Date:  2012-01-24       Impact factor: 3.346

2.  Crystallization and preliminary crystallographic analysis of LipC12, a true lipase isolated through a metagenomics approach.

Authors:  V P Martini; A Glogauer; J Iulek; E M Souza; F O Pedrosa; N Krieger
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-01-26

3.  Novel metagenome-derived, cold-adapted alkaline phospholipase with superior lipase activity as an intermediate between phospholipase and lipase.

Authors:  Mi-Hwa Lee; Ki-Hoon Oh; Chul-Hyung Kang; Ji-Hoon Kim; Tae-Kwang Oh; Choong-Min Ryu; Jung-Hoon Yoon
Journal:  Appl Environ Microbiol       Date:  2012-04-27       Impact factor: 4.792

Review 4.  Metagenomic analyses: past and future trends.

Authors:  Carola Simon; Rolf Daniel
Journal:  Appl Environ Microbiol       Date:  2010-12-17       Impact factor: 4.792

5.  Isolation of α-glucuronidase enzyme from a rumen metagenomic library.

Authors:  Charles C Lee; Rena E Kibblewhite; Kurt Wagschal; Ruiping Li; William J Orts
Journal:  Protein J       Date:  2012-03       Impact factor: 2.371

6.  Analysis of the thermostability determinants of hyperthermophilic esterase EstE1 based on its predicted three-dimensional structure.

Authors:  Jin-Kyu Rhee; Do-Yun Kim; Dae-Gyun Ahn; Jung-Hyuk Yun; Seung-Hwan Jang; Hang-Cheol Shin; Hyun-Soo Cho; Jae-Gu Pan; Jong-Won Oh
Journal:  Appl Environ Microbiol       Date:  2006-04       Impact factor: 4.792

7.  Crystallization and preliminary X-ray crystallographic analysis of EstE1, a new and thermostable esterase cloned from a metagenomic library.

Authors:  Jung-Sue Byun; Jin-Kyu Rhee; Dong-Uk Kim; Jong-Won Oh; Hyun-Soo Cho
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-01-27

8.  Prediction and experimental validation of enzyme substrate specificity in protein structures.

Authors:  Shivas R Amin; Serkan Erdin; R Matthew Ward; Rhonald C Lua; Olivier Lichtarge
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-21       Impact factor: 11.205

Review 9.  New extremophilic lipases and esterases from metagenomics.

Authors:  Olalla López-López; Maria E Cerdán; Maria I González Siso
Journal:  Curr Protein Pept Sci       Date:  2014       Impact factor: 3.272

10.  Characterization and its potential application of two esterases derived from the arctic sediment metagenome.

Authors:  Jeong Ho Jeon; Jun-Tae Kim; Sung Gyun Kang; Jung-Hyun Lee; Sang-Jin Kim
Journal:  Mar Biotechnol (NY)       Date:  2008-09-24       Impact factor: 3.619

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.