Literature DB >> 2471510

Unconventional codon reading by Mycoplasma mycoides tRNAs as revealed by partial sequence analysis.

Y S Guindy1, T Samuelsson, T I Johansen.   

Abstract

Continuing our investigation of the tRNA genes and gene products in Mycoplasma mycoides, we report the sequence of the gene for tRNALeu (CAA) as well as partial primary structures of the following tRNAs: Leu (CAA), Leu (UAG), Arg (UCU), Thr (AGU) and Ile (CAU). It is suggested that in M. mycoides, at least some of the family codon boxes are read by only one tRNA each, using an unconventional method which does not discriminate between the nucleotides in the third codon position. M. mycoides is the first free-living organism known to use an unconventional method of this kind.

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Year:  1989        PMID： 2471510      PMCID： PMC1138444          DOI： 10.1042/bj2580869

Source DB:  PubMed          Journal:  Biochem J        ISSN： 0264-6021            Impact factor:   3.857


  19 in total

1.  Unconventional methods in codon reading.

Authors:  U Lagerkvist
Journal:  Bioessays       Date:  1986-05       Impact factor: 4.345

2.  Studies on the sequence of the 3'-terminal region of turnip-yellow-mosaic-virus RNA.

Authors:  M Silberklang; A Prochiantz; A L Haenni; U L Rajbhandary
Journal:  Eur J Biochem       Date:  1977-02

3.  Codon--anticodon pairing: the wobble hypothesis.

Authors:  F H Crick
Journal:  J Mol Biol       Date:  1966-08       Impact factor: 5.469

4.  Apparent lack of discrimination in the reading of certain codons in Mycoplasma mycoides.

Authors:  T Samuelsson; Y S Guindy; F Lustig; T Borén; U Lagerkvist
Journal:  Proc Natl Acad Sci U S A       Date:  1987-05       Impact factor: 11.205

5.  Novel features in the genetic code and codon reading patterns in Neurospora crassa mitochondria based on sequences of six mitochondrial tRNAs.

Authors:  J E Heckman; J Sarnoff; B Alzner-DeWeerd; S Yin; U L RajBhandary
Journal:  Proc Natl Acad Sci U S A       Date:  1980-06       Impact factor: 11.205

6.  The nucleotide sequence of glycine tRNA from Mycoplasma mycoides sp. capri.

Authors:  M W Kilpatrick; R T Walker
Journal:  Nucleic Acids Res       Date:  1980-06-25       Impact factor: 16.971

7.  Occurrence of unmodified adenine and uracil at the first position of anticodon in threonine tRNAs in Mycoplasma capricolum.

Authors:  Y Andachi; F Yamao; M Iwami; A Muto; S Osawa
Journal:  Proc Natl Acad Sci U S A       Date:  1987-11       Impact factor: 11.205

8.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

9.  Unconventional reading of the glycine codons.

Authors:  T Samuelsson; T Axberg; T Borén; U Lagerkvist
Journal:  J Biol Chem       Date:  1983-11-10       Impact factor: 5.157

10.  The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression.

Authors:  K Shinozaki; M Ohme; M Tanaka; T Wakasugi; N Hayashida; T Matsubayashi; N Zaita; J Chunwongse; J Obokata; K Yamaguchi-Shinozaki; C Ohto; K Torazawa; B Y Meng; M Sugita; H Deno; T Kamogashira; K Yamada; J Kusuda; F Takaiwa; A Kato; N Tohdoh; H Shimada; M Sugiura
Journal:  EMBO J       Date:  1986-09       Impact factor: 11.598
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  11 in total

1.  tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features.

Authors:  Christian Marck; Henri Grosjean
Journal:  RNA       Date:  2002-10       Impact factor: 4.942

2.  Nucleotide sequence of a Mycoplasma mycoides RNA which is homologous to E. coli 4.5S RNA.

Authors:  T Samuelsson; Y Guindy
Journal:  Nucleic Acids Res       Date:  1990-08-25       Impact factor: 16.971

3.  Codon-reading specificity of an unmodified form of Escherichia coli tRNA1Ser in cell-free protein synthesis.

Authors:  K Takai; H Takaku; S Yokoyama
Journal:  Nucleic Acids Res       Date:  1996-08-01       Impact factor: 16.971

4.  Location of sites of transposon Tn916 insertion in the Mycoplasma mycoides genome.

Authors:  J C Whitley; L R Finch
Journal:  J Bacteriol       Date:  1989-12       Impact factor: 3.490

5.  Genomic maps of some strains within the Mycoplasma mycoides cluster.

Authors:  L E Pyle; T Taylor; L R Finch
Journal:  J Bacteriol       Date:  1990-12       Impact factor: 3.490

6.  Multiple translational products from a Mycoplasma hyorhinis gene expressed in Escherichia coli.

Authors:  S M Notarnicola; M A McIntosh; K S Wise
Journal:  J Bacteriol       Date:  1990-06       Impact factor: 3.490

7.  A Mycoplasma protein homologous to mammalian SRP54 recognizes a highly conserved domain of SRP RNA.

Authors:  T Samuelsson
Journal:  Nucleic Acids Res       Date:  1992-11-11       Impact factor: 16.971

8.  The gene for a tRNA modifying enzyme, m5U54-methyltransferase, is essential for viability in Escherichia coli.

Authors:  B C Persson; C Gustafsson; D E Berg; G R Björk
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-01       Impact factor: 11.205

9.  The nucleotide in position 32 of the tRNA anticodon loop determines ability of anticodon UCC to discriminate among glycine codons.

Authors:  F Lustig; T Borén; C Claesson; C Simonsson; M Barciszewska; U Lagerkvist
Journal:  Proc Natl Acad Sci U S A       Date:  1993-04-15       Impact factor: 11.205

Review 10.  Chemical and Conformational Diversity of Modified Nucleosides Affects tRNA Structure and Function.

Authors:  Ville Y P Väre; Emily R Eruysal; Amithi Narendran; Kathryn L Sarachan; Paul F Agris
Journal:  Biomolecules       Date:  2017-03-16
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