Literature DB >> 6355104

Unconventional reading of the glycine codons.

T Samuelsson, T Axberg, T Borén, U Lagerkvist.   

Abstract

We have used a protein-synthesizing in vitro system programmed with the phage message MS2-RNA to investigate the ability of glycyl-tRNAs with different anticodons to read the glycine codons. Under conditions of no competition, when the glycyl-tRNA analyzed was the only source of glycine for protein synthesis, each of the isoacceptors tested, tRNA1Gly (anticodon CCC), tRNA2Gly (anticodon N/UCC), tRNA3Gly (anticodon GCC) from Escherichia coli, and tRNAGly (anticodon UCC) from Mycoplasma mycoides, could read all of the glycine codons in the MS2 coat protein cistron (GGU, GGC, GGA, and GGG). However, tRNA1Gly seemed to have difficulties reading through the whole cistron. Experiments in which two glycyl-tRNAs competed for the same codon showed that the mycoplasma tRNAGly (anticodon UCC) was almost as efficient in the unorthodox reading of the codons GGU and GGC as it was in conventional reading. It would seem to be the only tRNAGly present in Mycoplasma mycoides and our results are consistent with this finding since the mycoplasma tRNAGly appears to have been designed to read all four glycine codons with approximately equal efficiency. The competition experiments furthermore showed that E. coli tRNA1Gly (anticodon CCC) reads the codon GGA more efficiently than it reads GGU and GGC suggesting that the mispair C . A between the wobble position of the anticodon and the third codon position might have appreciable stability.

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Year:  1983        PMID: 6355104

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  17 in total

1.  Mutations which alter the elbow region of tRNA2Gly reduce T4 gene 60 translational bypassing efficiency.

Authors:  A J Herr; J F Atkins; R F Gesteland
Journal:  EMBO J       Date:  1999-05-17       Impact factor: 11.598

2.  Codon-reading specificity of an unmodified form of Escherichia coli tRNA1Ser in cell-free protein synthesis.

Authors:  K Takai; H Takaku; S Yokoyama
Journal:  Nucleic Acids Res       Date:  1996-08-01       Impact factor: 16.971

3.  Codon discrimination and anticodon structural context.

Authors:  F Lustig; T Borén; Y S Guindy; P Elias; T Samuelsson; C W Gehrke; K C Kuo; U Lagerkvist
Journal:  Proc Natl Acad Sci U S A       Date:  1989-09       Impact factor: 11.205

4.  Unconventional codon reading by Mycoplasma mycoides tRNAs as revealed by partial sequence analysis.

Authors:  Y S Guindy; T Samuelsson; T I Johansen
Journal:  Biochem J       Date:  1989-03-15       Impact factor: 3.857

5.  Solution nuclear magnetic resonance analyses of the anticodon arms of proteinogenic and nonproteinogenic tRNA(Gly).

Authors:  Andrew T Chang; Edward P Nikonowicz
Journal:  Biochemistry       Date:  2012-04-18       Impact factor: 3.162

6.  Expression of the Synechocystis sp. strain PCC 6803 tRNA(Glu) gene provides tRNA for protein and chlorophyll biosynthesis.

Authors:  G P O'Neill; D Söll
Journal:  J Bacteriol       Date:  1990-11       Impact factor: 3.490

7.  Apparent lack of discrimination in the reading of certain codons in Mycoplasma mycoides.

Authors:  T Samuelsson; Y S Guindy; F Lustig; T Borén; U Lagerkvist
Journal:  Proc Natl Acad Sci U S A       Date:  1987-05       Impact factor: 11.205

8.  The nucleotide in position 32 of the tRNA anticodon loop determines ability of anticodon UCC to discriminate among glycine codons.

Authors:  F Lustig; T Borén; C Claesson; C Simonsson; M Barciszewska; U Lagerkvist
Journal:  Proc Natl Acad Sci U S A       Date:  1993-04-15       Impact factor: 11.205

9.  Occurrence of unmodified adenine and uracil at the first position of anticodon in threonine tRNAs in Mycoplasma capricolum.

Authors:  Y Andachi; F Yamao; M Iwami; A Muto; S Osawa
Journal:  Proc Natl Acad Sci U S A       Date:  1987-11       Impact factor: 11.205

10.  Unconventional decoding of the AUA codon as methionine by mitochondrial tRNAMet with the anticodon f5CAU as revealed with a mitochondrial in vitro translation system.

Authors:  Chie Takemoto; Linda L Spremulli; Lisa A Benkowski; Takuya Ueda; Takashi Yokogawa; Kimitsuna Watanabe
Journal:  Nucleic Acids Res       Date:  2009-01-16       Impact factor: 16.971

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