Literature DB >> 24707355

Modulating the Copper-Sulfur Interaction in Type 1 Blue Copper Azurin by Replacing Cys112 with Nonproteinogenic Homocysteine.

Kevin M Clark1, Yang Yu2, Wilfred A van der Donk3, Ninian Blackburn4, Yi Lu5.   

Abstract

The Cu-SCys interaction is known to play a dominant role in defining the type 1 (T1) blue copper center with respect to both its electronic structure and electron transfer function. Despite this importance, its role has yet to be probed by mutagenesis studies without dramatic change of its T1 copper character. We herein report replacement of the conserved Cys112 in azurin with the nonproteinogenic amino acid homocysteine. Based on electronic absorption, electron paramagnetic resonance, and extended x-ray absorption fine structural spectroscopic studies, this variant displays typical type 1 copper site features. Surprisingly, instead of increasing the strength of the Cu-sulfur interaction by the introduction of the extra methylene group, the Cys112Hcy azurin showed a decrease in the covalent interaction between SHcy and Cu(II) when compared with the WT SCys-Cu(II) interaction. This is likely due to geometric adjustment of the center that resulted in the copper ion moving out of the trigonal plane defined by two histidines and one Hcy and closer to Met121. These structural changes resulted in an increase of reduction potential by 35 mV, consistent with lower Cu-S covalency. These results suggest that the Cu-SCys interaction is close to being optimal in native blue copper protein. It also demonstrates the power of using nonproteinogenic amino acids in addressing important issues in bioinorganic chemistry.

Entities:  

Year:  2014        PMID: 24707355      PMCID: PMC3972132          DOI: 10.1039/C3QI00096F

Source DB:  PubMed          Journal:  Inorg Chem Front            Impact factor:   6.569


  30 in total

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5.  The influence of axial ligands on the reduction potential of blue copper proteins.

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Journal:  J Biol Inorg Chem       Date:  1999-10       Impact factor: 3.358

6.  X-ray Absorption Spectra of the Oxidized and Reduced Forms of C112D Azurin from Pseudomonas aeruginosa.

Authors:  Serena DeBeer; Cynthia N. Kiser; Gary A. Mines; John H. Richards; Harry B. Gray; Edward I. Solomon; Britt Hedman; Keith O. Hodgson
Journal:  Inorg Chem       Date:  1999-02-08       Impact factor: 5.165

7.  Effects of folding on metalloprotein active sites.

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Journal:  Proc Natl Acad Sci U S A       Date:  1997-04-29       Impact factor: 11.205

8.  The role of hydrogen bonding at the active site of a cupredoxin: the Phe114Pro azurin variant.

Authors:  Sachiko Yanagisawa; Mark J Banfield; Christopher Dennison
Journal:  Biochemistry       Date:  2006-07-25       Impact factor: 3.162

9.  Rack-induced metal binding vs. flexibility: Met121His azurin crystal structures at different pH.

Authors:  A Messerschmidt; L Prade; S J Kroes; J Sanders-Loehr; R Huber; G W Canters
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4.  Understanding and Modulating Metalloenzymes with Unnatural Amino Acids, Non-Native Metal Ions, and Non-Native Metallocofactors.

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  6 in total

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