Literature DB >> 29574033

Computational neuroanatomy of baby brains: A review.

Gang Li1, Li Wang1, Pew-Thian Yap1, Fan Wang1, Zhengwang Wu1, Yu Meng1, Pei Dong1, Jaeil Kim2, Feng Shi3, Islem Rekik4, Weili Lin1, Dinggang Shen5.   

Abstract

The first postnatal years are an exceptionally dynamic and critical period of structural, functional and connectivity development of the human brain. The increasing availability of non-invasive infant brain MR images provides unprecedented opportunities for accurate and reliable charting of dynamic early brain developmental trajectories in understanding normative and aberrant growth. However, infant brain MR images typically exhibit reduced tissue contrast (especially around 6 months of age), large within-tissue intensity variations, and regionally-heterogeneous, dynamic changes, in comparison with adult brain MR images. Consequently, the existing computational tools developed typically for adult brains are not suitable for infant brain MR image processing. To address these challenges, many infant-tailored computational methods have been proposed for computational neuroanatomy of infant brains. In this review paper, we provide a comprehensive review of the state-of-the-art computational methods for infant brain MRI processing and analysis, which have advanced our understanding of early postnatal brain development. We also summarize publically available infant-dedicated resources, including MRI datasets, computational tools, grand challenges, and brain atlases. Finally, we discuss the limitations in current research and suggest potential future research directions.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Brain atlas; Cortical surface; Infant brain; Parcellation; Registration; Segmentation

Mesh:

Year:  2018        PMID: 29574033      PMCID: PMC6150852          DOI: 10.1016/j.neuroimage.2018.03.042

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  163 in total

1.  Multi-contrast human neonatal brain atlas: application to normal neonate development analysis.

Authors:  Kenichi Oishi; Susumu Mori; Pamela K Donohue; Thomas Ernst; Lynn Anderson; Steven Buchthal; Andreia Faria; Hangyi Jiang; Xin Li; Michael I Miller; Peter C M van Zijl; Linda Chang
Journal:  Neuroimage       Date:  2011-01-26       Impact factor: 6.556

2.  Exploring Gyral Patterns of Infant Cortical Folding based on Multi-view Curvature Information.

Authors:  Dingna Duan; Shunren Xia; Yu Meng; Li Wang; Weili Lin; John H Gilmore; Dinggang Shen; Gang Li
Journal:  Med Image Comput Comput Assist Interv       Date:  2017-09-04

3.  iBEAT: A toolbox for infant brain magnetic resonance image processing.

Authors:  Yakang Dai; Feng Shi; Li Wang; Guorong Wu; Dinggang Shen
Journal:  Neuroinformatics       Date:  2013-04

Review 4.  Diffusion tensor imaging of brain development.

Authors:  Petra S Hüppi; Jessica Dubois
Journal:  Semin Fetal Neonatal Med       Date:  2006-09-08       Impact factor: 3.926

5.  Can we predict subject-specific dynamic cortical thickness maps during infancy from birth?

Authors:  Yu Meng; Gang Li; Islem Rekik; Han Zhang; Yaozong Gao; Weili Lin; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2017-03-15       Impact factor: 5.038

6.  Infant brain probability templates for MRI segmentation and normalization.

Authors:  Mekibib Altaye; Scott K Holland; Marko Wilke; Christian Gaser
Journal:  Neuroimage       Date:  2008-08-13       Impact factor: 6.556

7.  Dynamic Development of Regional Cortical Thickness and Surface Area in Early Childhood.

Authors:  Amanda E Lyall; Feng Shi; Xiujuan Geng; Sandra Woolson; Gang Li; Li Wang; Robert M Hamer; Dinggang Shen; John H Gilmore
Journal:  Cereb Cortex       Date:  2014-03-02       Impact factor: 5.357

8.  Spatial distribution and longitudinal development of deep cortical sulcal landmarks in infants.

Authors:  Yu Meng; Gang Li; Weili Lin; John H Gilmore; Dinggang Shen
Journal:  Neuroimage       Date:  2014-06-17       Impact factor: 6.556

9.  Mapping longitudinal development of local cortical gyrification in infants from birth to 2 years of age.

Authors:  Gang Li; Li Wang; Feng Shi; Amanda E Lyall; Weili Lin; John H Gilmore; Dinggang Shen
Journal:  J Neurosci       Date:  2014-03-19       Impact factor: 6.167

10.  Infant brain atlases from neonates to 1- and 2-year-olds.

Authors:  Feng Shi; Pew-Thian Yap; Guorong Wu; Hongjun Jia; John H Gilmore; Weili Lin; Dinggang Shen
Journal:  PLoS One       Date:  2011-04-14       Impact factor: 3.240

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  53 in total

1.  A novel approach to multiple anatomical shape analysis: Application to fetal ventriculomegaly.

Authors:  Oualid Benkarim; Gemma Piella; Islem Rekik; Nadine Hahner; Elisenda Eixarch; Dinggang Shen; Gang Li; Miguel Angel González Ballester; Gerard Sanroma
Journal:  Med Image Anal       Date:  2020-06-10       Impact factor: 8.545

Review 2.  Role of deep learning in infant brain MRI analysis.

Authors:  Mahmoud Mostapha; Martin Styner
Journal:  Magn Reson Imaging       Date:  2019-06-20       Impact factor: 2.546

3.  Multi-task prediction of infant cognitive scores from longitudinal incomplete neuroimaging data.

Authors:  Ehsan Adeli; Yu Meng; Gang Li; Weili Lin; Dinggang Shen
Journal:  Neuroimage       Date:  2018-04-27       Impact factor: 6.556

4.  Associations of gestational age and birth anthropometric indicators with brain white matter maturation in full-term neonates.

Authors:  Chao Jin; Yanyan Li; Xianjun Li; Congcong Liu; Miaomiao Wang; Yannan Cheng; Jie Zheng; Jian Yang
Journal:  Hum Brain Mapp       Date:  2019-05-06       Impact factor: 5.038

5.  Unsupervised Learning for Spherical Surface Registration.

Authors:  Fenqiang Zhao; Zhengwang Wu; Li Wang; Weili Lin; Shunren Xia; Dinggang Shen; Gang Li
Journal:  Mach Learn Med Imaging       Date:  2020-09-29

6.  Benchmark on Automatic 6-month-old Infant Brain Segmentation Algorithms: The iSeg-2017 Challenge.

Authors:  Li Wang; Dong Nie; Guannan Li; Elodie Puybareau; Jose Dolz; Qian Zhang; Fan Wang; Jing Xia; Zhengwang Wu; Jiawei Chen; Kim-Han Thung; Toan Duc Bui; Jitae Shin; Guodong Zeng; Guoyan Zheng; Vladimir S Fonov; Andrew Doyle; Yongchao Xu; Pim Moeskops; Josien P W Pluim; Christian Desrosiers; Ismail Ben Ayed; Gerard Sanroma; Oualid M Benkarim; Adria Casamitjana; Veronica Vilaplana; Weili Lin; Gang Li; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2019-02-27       Impact factor: 10.048

7.  Volume-Based Analysis of 6-Month-Old Infant Brain MRI for Autism Biomarker Identification and Early Diagnosis.

Authors:  Li Wang; Gang Li; Feng Shi; Xiaohuan Cao; Chunfeng Lian; Dong Nie; Mingxia Liu; Han Zhang; Guannan Li; Zhengwang Wu; Weili Lin; Dinggang Shen
Journal:  Med Image Comput Comput Assist Interv       Date:  2018-09-13

8.  Topological correction of infant white matter surfaces using anatomically constrained convolutional neural network.

Authors:  Liang Sun; Daoqiang Zhang; Chunfeng Lian; Li Wang; Zhengwang Wu; Wei Shao; Weili Lin; Dinggang Shen; Gang Li
Journal:  Neuroimage       Date:  2019-05-18       Impact factor: 6.556

9.  Construction of 4D infant cortical surface atlases with sharp folding patterns via spherical patch-based group-wise sparse representation.

Authors:  Zhengwang Wu; Li Wang; Weili Lin; John H Gilmore; Gang Li; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2019-05-21       Impact factor: 5.038

10.  Examining the relationship between perinatal depression and neurodevelopment in infants and children through structural and functional neuroimaging research.

Authors:  Christy Duan; Megan M Hare; Morganne Staring; Kristina M Deligiannidis
Journal:  Int Rev Psychiatry       Date:  2019-01-31
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