Literature DB >> 24558040

Introduction of a synthetic CO₂-fixing photorespiratory bypass into a cyanobacterium.

Patrick M Shih1, Jan Zarzycki, Krishna K Niyogi, Cheryl A Kerfeld.   

Abstract

Global photosynthetic productivity is limited by the enzymatic assimilation of CO2 into organic carbon compounds. Ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO), the carboxylating enzyme of the Calvin-Benson cycle, poorly discriminates between CO2 and O2, leading to photorespiration and the loss of fixed carbon and nitrogen. With the advent of synthetic biology, it is now feasible to design, synthesize, and introduce biochemical pathways in vivo. We engineered a synthetic photorespiratory bypass based on the 3-hydroxypropionate bi-cycle into the model cyanobacterium, Synechococcus elongatus sp. PCC 7942. The heterologously expressed cycle is designed to function as both a photorespiratory bypass and an additional CO2-fixing pathway, supplementing the Calvin-Benson cycle. We demonstrate the function of all six introduced enzymes and identify bottlenecks to be targeted in subsequent bioengineering. These results have implications for efforts to improve photosynthesis and for the "green" production of high value products of biotechnological interest.

Entities:  

Keywords:  3-Hydroxypropionate Bi-cycle; Bioenergy; Chloroflexus; Cyanobacteria; Metabolic Engineering; Photosynthesis; Rubisco; Synechococcus; Synthetic Biology

Mesh:

Substances:

Year:  2014        PMID: 24558040      PMCID: PMC3975000          DOI: 10.1074/jbc.C113.543132

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  29 in total

1.  The Compartmentation of Acetyl-Coenzyme A Carboxylase in Plants.

Authors:  Y. Sasaki; T. Konishi; Y. Nagano
Journal:  Plant Physiol       Date:  1995-06       Impact factor: 8.340

Review 2.  Manufacturing molecules through metabolic engineering.

Authors:  Jay D Keasling
Journal:  Science       Date:  2010-12-03       Impact factor: 47.728

3.  Rewiring hydrogenase-dependent redox circuits in cyanobacteria.

Authors:  Daniel C Ducat; Gairik Sachdeva; Pamela A Silver
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-22       Impact factor: 11.205

4.  Propionyl-coenzyme A synthase from Chloroflexus aurantiacus, a key enzyme of the 3-hydroxypropionate cycle for autotrophic CO2 fixation.

Authors:  Birgit E Alber; Georg Fuchs
Journal:  J Biol Chem       Date:  2002-01-30       Impact factor: 5.157

5.  Despite slow catalysis and confused substrate specificity, all ribulose bisphosphate carboxylases may be nearly perfectly optimized.

Authors:  Guillaume G B Tcherkez; Graham D Farquhar; T John Andrews
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-26       Impact factor: 11.205

6.  Coassimilation of organic substrates via the autotrophic 3-hydroxypropionate bi-cycle in Chloroflexus aurantiacus.

Authors:  Jan Zarzycki; Georg Fuchs
Journal:  Appl Environ Microbiol       Date:  2011-07-15       Impact factor: 4.792

7.  Cross-species analysis traces adaptation of Rubisco toward optimality in a low-dimensional landscape.

Authors:  Yonatan Savir; Elad Noor; Ron Milo; Tsvi Tlusty
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-08       Impact factor: 11.205

8.  The photorespiratory glycolate metabolism is essential for cyanobacteria and might have been conveyed endosymbiontically to plants.

Authors:  Marion Eisenhut; Wolfgang Ruth; Maya Haimovich; Hermann Bauwe; Aaron Kaplan; Martin Hagemann
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-28       Impact factor: 11.205

9.  Identifying the missing steps of the autotrophic 3-hydroxypropionate CO2 fixation cycle in Chloroflexus aurantiacus.

Authors:  Jan Zarzycki; Volker Brecht; Michael Müller; Georg Fuchs
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-02       Impact factor: 11.205

10.  Expression of the sub-pathways of the Chloroflexus aurantiacus 3-hydroxypropionate carbon fixation bicycle in E. coli: Toward horizontal transfer of autotrophic growth.

Authors:  Matthew d Mattozzi; Marika Ziesack; Mathias J Voges; Pamela A Silver; Jeffrey C Way
Journal:  Metab Eng       Date:  2013-01-29       Impact factor: 9.783

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  24 in total

Review 1.  Bioinformatic analysis of the distribution of inorganic carbon transporters and prospective targets for bioengineering to increase Ci uptake by cyanobacteria.

Authors:  Sandeep B Gaudana; Jan Zarzycki; Vamsi K Moparthi; Cheryl A Kerfeld
Journal:  Photosynth Res       Date:  2014-11-16       Impact factor: 3.573

2.  A bioarchitectonic approach to the modular engineering of metabolism.

Authors:  Cheryl A Kerfeld
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-09-26       Impact factor: 6.237

Review 3.  Biochemical and synthetic biology approaches to improve photosynthetic CO2-fixation.

Authors:  Tobias J Erb; Jan Zarzycki
Journal:  Curr Opin Chem Biol       Date:  2016-07-09       Impact factor: 8.822

Review 4.  Harnessing the power of microbial autotrophy.

Authors:  Nico J Claassens; Diana Z Sousa; Vitor A P Martins Dos Santos; Willem M de Vos; John van der Oost
Journal:  Nat Rev Microbiol       Date:  2016-09-26       Impact factor: 60.633

Review 5.  A short history of RubisCO: the rise and fall (?) of Nature's predominant CO2 fixing enzyme.

Authors:  Tobias J Erb; Jan Zarzycki
Journal:  Curr Opin Biotechnol       Date:  2017-08-29       Impact factor: 9.740

6.  Evolution of the 3-hydroxypropionate bicycle and recent transfer of anoxygenic photosynthesis into the Chloroflexi.

Authors:  Patrick M Shih; Lewis M Ward; Woodward W Fischer
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-18       Impact factor: 11.205

7.  Assimilation of formic acid and CO2 by engineered Escherichia coli equipped with reconstructed one-carbon assimilation pathways.

Authors:  Junho Bang; Sang Yup Lee
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-17       Impact factor: 11.205

8.  A synthetic pathway for the fixation of carbon dioxide in vitro.

Authors:  Thomas Schwander; Lennart Schada von Borzyskowski; Simon Burgener; Niña Socorro Cortina; Tobias J Erb
Journal:  Science       Date:  2016-11-18       Impact factor: 47.728

9.  Redesigning photosynthesis to sustainably meet global food and bioenergy demand.

Authors:  Donald R Ort; Sabeeha S Merchant; Jean Alric; Alice Barkan; Robert E Blankenship; Ralph Bock; Roberta Croce; Maureen R Hanson; Julian M Hibberd; Stephen P Long; Thomas A Moore; James Moroney; Krishna K Niyogi; Martin A J Parry; Pamela P Peralta-Yahya; Roger C Prince; Kevin E Redding; Martin H Spalding; Klaas J van Wijk; Wim F J Vermaas; Susanne von Caemmerer; Andreas P M Weber; Todd O Yeates; Joshua S Yuan; Xin Guang Zhu
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-29       Impact factor: 11.205

10.  Photosynthetic constraints on fuel from microbes.

Authors:  Charles A R Cotton; Jeffrey S Douglass; Sven De Causmaecker; Katharina Brinkert; Tanai Cardona; Andrea Fantuzzi; A William Rutherford; James W Murray
Journal:  Front Bioeng Biotechnol       Date:  2015-03-18
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