Literature DB >> 21764971

Coassimilation of organic substrates via the autotrophic 3-hydroxypropionate bi-cycle in Chloroflexus aurantiacus.

Jan Zarzycki1, Georg Fuchs.   

Abstract

Chloroflexus aurantiacus is a facultative autotrophic green nonsulfur bacterium that grows phototrophically in thermal springs and forms microbial mats with cyanobacteria. Cyanobacteria produce glycolate during the day (photorespiration) and excrete fermentation products at night. C. aurantiacus uses the 3-hydroxypropionate bi-cycle for autotrophic carbon fixation. This pathway was thought to be also suited for the coassimilation of various organic substrates such as glycolate, acetate, propionate, 3-hydroxypropionate, lactate, butyrate, or succinate. To test this possibility, we added these compounds at a 5 mM concentration to autotrophically pregrown cells. Although the provided amounts of H(2) and CO(2) allowed continuing photoautotrophic growth, cells immediately consumed most substrates at rates equaling the rate of autotrophic carbon fixation. Using [(14)C]acetate, half of the labeled organic carbon was incorporated into cell mass. Our data suggest that C. aurantiacus uses the 3-hydroxypropionate bi-cycle, together with the glyoxylate cycle, to channel organic substrates into the central carbon metabolism. Enzyme activities of the 3-hydroxypropionate bi-cycle were marginally affected when cells were grown heterotrophically with such organic substrates. The 3-hydroxypropionate bi-cycle in Chloroflexi is unique and was likely fostered in an environment in which traces of organic compounds can be coassimilated. Other bacteria living under oligotrophic conditions acquired genes of a rudimentary 3-hydroxypropionate bi-cycle, possibly for the same purpose. Examples are Chloroherpeton thalassium, Erythrobacter sp. strain NAP-1, Nitrococcus mobilis, and marine gammaproteobacteria of the OM60/NOR5 clade such as Congregibacter litoralis.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21764971      PMCID: PMC3165406          DOI: 10.1128/AEM.00705-11

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  41 in total

1.  Draft genome sequence of the anoxygenic filamentous phototrophic bacterium Oscillochloris trichoides subsp. DG-6.

Authors:  Boris B Kuznetsov; Ruslan N Ivanovsky; Olga I Keppen; Marina V Sukhacheva; Boris K Bumazhkin; Ekaterina O Patutina; Alexey V Beletsky; Andrey V Mardanov; Roman V Baslerov; Angela N Panteleeva; Tatjana V Kolganova; Nikolai V Ravin; Konstantin G Skryabin
Journal:  J Bacteriol       Date:  2010-10-29       Impact factor: 3.490

2.  Propionyl-coenzyme A synthase from Chloroflexus aurantiacus, a key enzyme of the 3-hydroxypropionate cycle for autotrophic CO2 fixation.

Authors:  Birgit E Alber; Georg Fuchs
Journal:  J Biol Chem       Date:  2002-01-30       Impact factor: 5.157

3.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

4.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

5.  Oscillochloris trichoides neotype strain DG-6.

Authors:  O I Keppen; O I Baulina; E N Kondratieva
Journal:  Photosynth Res       Date:  1994-07       Impact factor: 3.573

6.  Redox homeostasis phenotypes in RubisCO-deficient Rhodobacter sphaeroides via ensemble modeling.

Authors:  Matthew L Rizk; Rick Laguna; Kevin M Smith; F Robert Tabita; James C Liao
Journal:  Biotechnol Prog       Date:  2010-10-11

7.  Identifying the missing steps of the autotrophic 3-hydroxypropionate CO2 fixation cycle in Chloroflexus aurantiacus.

Authors:  Jan Zarzycki; Volker Brecht; Michael Müller; Georg Fuchs
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-02       Impact factor: 11.205

8.  The apparent malate synthase activity of Rhodobacter sphaeroides is due to two paralogous enzymes, (3S)-Malyl-coenzyme A (CoA)/{beta}-methylmalyl-CoA lyase and (3S)- Malyl-CoA thioesterase.

Authors:  Tobias J Erb; Lena Frerichs-Revermann; Georg Fuchs; Birgit E Alber
Journal:  J Bacteriol       Date:  2010-01-04       Impact factor: 3.490

9.  Molecular dissection of bacterial acrylate catabolism--unexpected links with dimethylsulfoniopropionate catabolism and dimethyl sulfide production.

Authors:  Jonathan D Todd; Andrew R J Curson; Nefeli Nikolaidou-Katsaraidou; Charles A Brearley; Nicholas J Watmough; Yohan Chan; Philip C B Page; Lei Sun; Andrew W B Johnston
Journal:  Environ Microbiol       Date:  2009-10-05       Impact factor: 5.491

10.  A second pathway to degrade pyrimidine nucleic acid precursors in eukaryotes.

Authors:  Gorm Andersen; Olof Björnberg; Silvia Polakova; Yuriy Pynyaha; Anna Rasmussen; Kasper Møller; Anders Hofer; Thomas Moritz; Michael Paolo Bastner Sandrini; Anna-Maria Merico; Concetta Compagno; Hans-Erik Akerlund; Zoran Gojković; Jure Piskur
Journal:  J Mol Biol       Date:  2008-05-17       Impact factor: 5.469

View more
  21 in total

1.  Metaproteomics of a gutless marine worm and its symbiotic microbial community reveal unusual pathways for carbon and energy use.

Authors:  Manuel Kleiner; Cecilia Wentrup; Christian Lott; Hanno Teeling; Silke Wetzel; Jacque Young; Yun-Juan Chang; Manesh Shah; Nathan C VerBerkmoes; Jan Zarzycki; Georg Fuchs; Stephanie Markert; Kristina Hempel; Birgit Voigt; Dörte Becher; Manuel Liebeke; Michael Lalk; Dirk Albrecht; Michael Hecker; Thomas Schweder; Nicole Dubilier
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-18       Impact factor: 11.205

Review 2.  Carboxylases in natural and synthetic microbial pathways.

Authors:  Tobias J Erb
Journal:  Appl Environ Microbiol       Date:  2011-10-14       Impact factor: 4.792

3.  Analysis of the metatranscriptome of microbial communities of an alkaline hot sulfur spring revealed different gene encoding pathway enzymes associated with energy metabolism.

Authors:  Swetaleena Tripathy; Soumesh Kumar Padhi; Sriprakash Mohanty; Mrinal Samanta; Nikhil Kumar Maiti
Journal:  Extremophiles       Date:  2016-06-11       Impact factor: 2.395

4.  Rhodobacter sphaeroides uses a reductive route via propionyl coenzyme A to assimilate 3-hydroxypropionate.

Authors:  Kathrin Schneider; Marie Asao; Michael S Carter; Birgit E Alber
Journal:  J Bacteriol       Date:  2011-11-04       Impact factor: 3.490

5.  Evolution of the 3-hydroxypropionate bicycle and recent transfer of anoxygenic photosynthesis into the Chloroflexi.

Authors:  Patrick M Shih; Lewis M Ward; Woodward W Fischer
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-18       Impact factor: 11.205

6.  Impact of Zero-Valent Iron on Freshwater Bacterioplankton Metabolism as Predicted from 16S rRNA Gene Sequence Libraries.

Authors:  Nhung H A Nguyen; Roman Špánek; Priscila Falagan-Lotsch; Alena Ševců
Journal:  Curr Microbiol       Date:  2021-02-01       Impact factor: 2.188

7.  Biochemical Validation of the Glyoxylate Cycle in the Cyanobacterium Chlorogloeopsis fritschii Strain PCC 9212.

Authors:  Shuyi Zhang; Donald A Bryant
Journal:  J Biol Chem       Date:  2015-04-13       Impact factor: 5.157

8.  Structural basis for a bispecific NADP+ and CoA binding site in an archaeal malonyl-coenzyme A reductase.

Authors:  Ulrike Demmer; Eberhard Warkentin; Ankita Srivastava; Daniel Kockelkorn; Markus Pötter; Achim Marx; Georg Fuchs; Ulrich Ermler
Journal:  J Biol Chem       Date:  2013-01-16       Impact factor: 5.157

9.  Introduction of a synthetic CO₂-fixing photorespiratory bypass into a cyanobacterium.

Authors:  Patrick M Shih; Jan Zarzycki; Krishna K Niyogi; Cheryl A Kerfeld
Journal:  J Biol Chem       Date:  2014-02-20       Impact factor: 5.157

10.  Temporal metatranscriptomic patterning in phototrophic Chloroflexi inhabiting a microbial mat in a geothermal spring.

Authors:  Christian G Klatt; Zhenfeng Liu; Marcus Ludwig; Michael Kühl; Sheila I Jensen; Donald A Bryant; David M Ward
Journal:  ISME J       Date:  2013-04-11       Impact factor: 10.302

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.