Literature DB >> 2453009

Prebiotic ribose synthesis: a critical analysis.

R Shapiro1.   

Abstract

The discovery of catalytic ability in RNA has given fresh impetus to speculations that RNA played a critical role in the origin of life. This question must rest on the plausibility of prebiotic oligonucleotide synthesis, rather than on the properties of the final product. Many claims have been published to support the idea that the components of RNA were readily available on the prebiotic earth. In this article, the literature cited in support of the prebiotic availability of one subunit, D-ribose, is reviewed to determine whether it justifies the claim. Polymerization of formaldehyde (the formose reaction) has been the single reaction cited for prebiotic ribose synthesis. It has been conducted with different catalysts: numerous basic substances, neutral clays and heat, and various types of radiation. Ribose has been identified (yields are uncertain, but unlikely to be greater than 1%) in reactions run with concentrated (0.15 M or greater) formaldehyde. It has been claimed in reactions run at lower concentration, but characterization has been inadequate, and experimental details have not been provided. The complex sugar mixture produced in the formose reaction is rapidly destroyed under the reaction conditions. Nitrogenous substances (needed for prebiotic base synthesis) would interfere with the formose reaction by reacting with formaldehyde, the intermediates, and sugar products in undesirable ways. The evidence that is currently available does not support the availability of ribose on the prebiotic earth, except perhaps for brief periods of time, in low concentration as part of a complex mixture, and under conditions unsuitable for nucleoside synthesis.

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Year:  1988        PMID: 2453009     DOI: 10.1007/bf01808782

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  33 in total

1.  The photochemistry of biogenic gases in the early and present atmosphere.

Authors:  J S Levine; T R Augustsson
Journal:  Orig Life Evol Biosph       Date:  1985       Impact factor: 1.950

2.  Alanine synthesis from glyceraldehyde and ammonium ion in aqueous solution.

Authors:  A L Weber
Journal:  J Mol Evol       Date:  1985       Impact factor: 2.395

3.  Thermodynamic equilibrium and the inorganic origin of organic compounds.

Authors:  R V Eck; E R Lippincott; M O Dayhoff; Y T Pratt
Journal:  Science       Date:  1966-08-05       Impact factor: 47.728

Review 4.  On the origin of RNA splicing and introns.

Authors:  P A Sharp
Journal:  Cell       Date:  1985-09       Impact factor: 41.582

5.  Speculations on the early course of evolution.

Authors:  J E Darnell; W F Doolittle
Journal:  Proc Natl Acad Sci U S A       Date:  1986-03       Impact factor: 11.205

6.  Catalysis by RNA.

Authors:  D S Waugh; N R Pace
Journal:  Bioessays       Date:  1986-02       Impact factor: 4.345

7.  A model for the RNA-catalyzed replication of RNA.

Authors:  T R Cech
Journal:  Proc Natl Acad Sci U S A       Date:  1986-06       Impact factor: 11.205

Review 8.  Biological catalysis by RNA.

Authors:  T R Cech; B L Bass
Journal:  Annu Rev Biochem       Date:  1986       Impact factor: 23.643

Review 9.  RNA catalysis and the origins of life.

Authors:  L E Orgel
Journal:  J Theor Biol       Date:  1986-11-21       Impact factor: 2.691

10.  Reactions of formaldehyde with guanosine.

Authors:  K Hemminki
Journal:  Toxicol Lett       Date:  1981-10       Impact factor: 4.372

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  56 in total

1.  The possible role of volcanic aquifers in prebiologic genesis of organic compounds and RNA.

Authors:  J Washington
Journal:  Orig Life Evol Biosph       Date:  2000-02       Impact factor: 1.950

2.  How long did it take for life to begin and evolve to cyanobacteria?

Authors:  A Lazcano; S L Miller
Journal:  J Mol Evol       Date:  1994-12       Impact factor: 2.395

Review 3.  Ribonucleotides.

Authors:  John D Sutherland
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-03-10       Impact factor: 10.005

Review 4.  Mineral surfaces, geochemical complexities, and the origins of life.

Authors:  Robert M Hazen; Dimitri A Sverjensky
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-04-14       Impact factor: 10.005

Review 5.  Setting the stage: the history, chemistry, and geobiology behind RNA.

Authors:  Steven A Benner; Hyo-Joong Kim; Zunyi Yang
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-01-01       Impact factor: 10.005

6.  Planetary organic chemistry and the origins of biomolecules.

Authors:  Steven A Benner; Hyo-Joong Kim; Myung-Jung Kim; Alonso Ricardo
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-05-26       Impact factor: 10.005

7.  New ligase-derived RNA polymerase ribozymes.

Authors:  Michael S Lawrence; David P Bartel
Journal:  RNA       Date:  2005-06-29       Impact factor: 4.942

Review 8.  Natural selection in the "RNA-like world".

Authors:  M Hermes-Lima
Journal:  Naturwissenschaften       Date:  1990-05

9.  Conditions for the emergence of life on the early Earth: summary and reflections.

Authors:  Joshua Jortner
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2006-10-29       Impact factor: 6.237

Review 10.  The origin and amplification of biomolecular chirality.

Authors:  W A Bonner
Journal:  Orig Life Evol Biosph       Date:  1991       Impact factor: 1.950

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