Literature DB >> 20452951

Ribonucleotides.

John D Sutherland1.   

Abstract

It has normally been assumed that ribonucleotides arose on the early Earth through a process in which ribose, the nucleobases, and phosphate became conjoined. However, under plausible prebiotic conditions, condensation of nucleobases with ribose to give beta-ribonucleosides is fraught with difficulties. The reaction with purine nucleobases is low-yielding and the reaction with the canonical pyrimidine nucleobases does not work at all. The reasons for these difficulties are considered and an alternative high-yielding synthesis of pyrimidine nucleotides is discussed. Fitting the new synthesis to a plausible geochemical scenario is a remaining challenge but the prospects appear good. Discovery of an improved method of purine synthesis, and an efficient means of stringing activated nucleotides together, will provide underpinning support to those theories that posit a central role for RNA in the origins of life.

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Year:  2010        PMID: 20452951      PMCID: PMC2845210          DOI: 10.1101/cshperspect.a005439

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  47 in total

1.  Chemical etiology of nucleic acid structure: the alpha-threofuranosyl-(3'-->2') oligonucleotide system.

Authors:  K Schöning; P Scholz; S Guntha; X Wu; R Krishnamurthy; A Eschenmoser
Journal:  Science       Date:  2000-11-17       Impact factor: 47.728

Review 2.  The antiquity of RNA-based evolution.

Authors:  Gerald F Joyce
Journal:  Nature       Date:  2002-07-11       Impact factor: 49.962

3.  Direct assembly of nucleoside precursors from two- and three-carbon units.

Authors:  Carole Anastasi; Michael A Crowe; Matthew W Powner; John D Sutherland
Journal:  Angew Chem Int Ed Engl       Date:  2006-09-18       Impact factor: 15.336

4.  Direct evidence for the availability of reactive, water soluble phosphorus on the early Earth. H-phosphinic acid from the Nantan meteorite.

Authors:  David E Bryant; Terence P Kee
Journal:  Chem Commun (Camb)       Date:  2006-05-05       Impact factor: 6.222

5.  The case for an ancestral genetic system involving simple analogues of the nucleotides.

Authors:  G F Joyce; A W Schwartz; S L Miller; L E Orgel
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

6.  Synthesis of long prebiotic oligomers on mineral surfaces.

Authors:  J P Ferris; A R Hill; R Liu; L E Orgel
Journal:  Nature       Date:  1996-05-02       Impact factor: 49.962

7.  Protonation studies of modified adenine and adenine nucleotides by theoretical calculations and (15)N NMR.

Authors:  Dan T Major; Avital Laxer; Bilha Fischer
Journal:  J Org Chem       Date:  2002-02-08       Impact factor: 4.354

8.  Prebiotic phosphorylation of nucleosides in formamide.

Authors:  A M Schoffstall
Journal:  Orig Life       Date:  1976-12

9.  Synthesis of activated pyrimidine ribonucleotides in prebiotically plausible conditions.

Authors:  Matthew W Powner; Béatrice Gerland; John D Sutherland
Journal:  Nature       Date:  2009-05-14       Impact factor: 49.962

Review 10.  Prebiotic chemistry and the origin of the RNA world.

Authors:  Leslie E Orgel
Journal:  Crit Rev Biochem Mol Biol       Date:  2004 Mar-Apr       Impact factor: 8.250

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  18 in total

1.  Potential pitfalls in MALDI-TOF MS analysis of abiotically synthesized RNA oligonucleotides.

Authors:  Bradley T Burcar; Lauren M Cassidy; Elizabeth M Moriarty; Prakash C Joshi; Kristin M Coari; Linda B McGown
Journal:  Orig Life Evol Biosph       Date:  2013-06-22       Impact factor: 1.950

2.  Information-Theoretic Considerations Concerning the Origin of Life.

Authors:  Christoph Adami
Journal:  Orig Life Evol Biosph       Date:  2015-06-11       Impact factor: 1.950

3.  Theory of the origin, evolution, and nature of life.

Authors:  Erik D Andrulis
Journal:  Life (Basel)       Date:  2011-12-23

Review 4.  The algorithmic origins of life.

Authors:  Sara Imari Walker; Paul C W Davies
Journal:  J R Soc Interface       Date:  2012-12-12       Impact factor: 4.118

5.  Refining the genetic alphabet: a late-period selection pressure?

Authors:  Andro C Rios; Yitzhak Tor
Journal:  Astrobiology       Date:  2012-09       Impact factor: 4.335

6.  Hydrolytic Fitness of N-glycosyl Bonds: Comparing the Deglycosylation Kinetics of Modified, Alternative and Native Nucleosides.

Authors:  Andro C Rios; Hiu T Yu; Yitzhak Tor
Journal:  J Phys Org Chem       Date:  2015-03       Impact factor: 2.391

7.  Subsumed complexity: abiogenesis as a by-product of complex energy transduction.

Authors:  Z R Adam; D Zubarev; M Aono; H James Cleaves
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2017-12-28       Impact factor: 4.226

Review 8.  D-ribose and pathogenesis of Alzheimer's disease.

Authors:  Mehjbeen Javed; Md Irshad Ahmad; Hina Javed; Sufia Naseem
Journal:  Mol Biol Rep       Date:  2020-01-13       Impact factor: 2.316

Review 9.  Bioenergetics and life's origins.

Authors:  David Deamer; Arthur L Weber
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-02       Impact factor: 10.005

10.  Possible role of metal(II) octacyanomolybdate(IV) in chemical evolution: interaction with ribose nucleotides.

Authors:  Anand Kumar
Journal:  Orig Life Evol Biosph       Date:  2012-12-21       Impact factor: 1.950

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