Literature DB >> 24526962

1-(4-Methyl-phenyl-sulfon-yl)-5,6-di-nitro-1H-indazole.

Bassou Oulemda1, El Mostapha Rakib1, Najat Abbassi1, Mohamed Saadi2, Lahcen El Ammari2.   

Abstract

In the title compound, C14H10N4O6S, the indazole ring system is almost perpendicular to the tosyl ring, as indicated by the dihedral angle of 89.40 (9)° between their planes. The dihedral angles between the indazole system and the nitro groups are 57.0 (3) and 31.9 (3)°. In the crystal, mol-ecules are linked by C-H⋯O inter-actions, forming chains running along [100].

Entities:  

Year:  2013        PMID: 24526962      PMCID: PMC3914120          DOI: 10.1107/S1600536813034326

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of sulfonamides, see: Schmidt et al. (2008 ▶); Liu et al. (2004 ▶); Ali et al. (2008 ▶); Patel et al. (1999 ▶); Mosti et al. (2000 ▶); Bouissane et al. (2006 ▶); Abbassi et al. (2012 ▶). For the structures of similar compounds, see: Abbassi et al. (2013 ▶); Chicha et al. (2013 ▶).

Experimental

Crystal data

C14H10N4O6S M = 362.32 Triclinic, a = 7.4125 (3) Å b = 8.5371 (3) Å c = 13.0825 (5) Å α = 90.401 (2)° β = 95.707 (2)° γ = 111.302 (2)° V = 766.66 (5) Å3 Z = 2 Mo Kα radiation μ = 0.25 mm−1 T = 296 K 0.42 × 0.35 × 0.28 mm

Data collection

Bruker X8 APEX diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.693, T max = 0.747 19101 measured reflections 3383 independent reflections 2984 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.125 S = 1.07 3383 reflections 227 parameters H-atom parameters constrained Δρmax = 0.46 e Å−3 Δρmin = −0.32 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536813034326/bt6953sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813034326/bt6953Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536813034326/bt6953Isup3.cml Additional supporting information: crystallographic information; 3D view; checkCIF report
C14H10N4O6SZ = 2
Mr = 362.32F(000) = 372
Triclinic, P1Dx = 1.570 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.4125 (3) ÅCell parameters from 3383 reflections
b = 8.5371 (3) Åθ = 2.6–27.1°
c = 13.0825 (5) ŵ = 0.25 mm1
α = 90.401 (2)°T = 296 K
β = 95.707 (2)°Block, colourless
γ = 111.302 (2)°0.42 × 0.35 × 0.28 mm
V = 766.66 (5) Å3
Bruker X8 APEX diffractometer3383 independent reflections
Radiation source: fine-focus sealed tube2984 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.031
φ and ω scansθmax = 27.1°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −9→9
Tmin = 0.693, Tmax = 0.747k = −10→10
19101 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H-atom parameters constrained
wR(F2) = 0.125w = 1/[σ2(Fo2) + (0.0641P)2 + 0.3549P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
3383 reflectionsΔρmax = 0.46 e Å3
227 parametersΔρmin = −0.32 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.023 (4)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against all reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on all data will be even larger.
xyzUiso*/Ueq
C10.0249 (2)0.1414 (2)0.35023 (12)0.0319 (3)
C20.1588 (3)0.2338 (2)0.43202 (13)0.0365 (4)
H20.29240.26320.43120.044*
C30.0814 (3)0.2782 (2)0.51328 (13)0.0370 (4)
C4−0.1209 (3)0.2326 (2)0.51564 (13)0.0389 (4)
C5−0.2510 (3)0.1422 (2)0.43547 (14)0.0395 (4)
H5−0.38450.11210.43730.047*
C6−0.1768 (2)0.0965 (2)0.35082 (13)0.0340 (4)
C7−0.2599 (3)0.0120 (2)0.25344 (14)0.0401 (4)
H7−0.3929−0.03170.23220.048*
C80.2592 (2)0.2835 (2)0.12063 (13)0.0341 (4)
C90.3100 (3)0.4449 (2)0.16444 (15)0.0459 (4)
H90.34650.46690.23470.055*
C100.3047 (3)0.5715 (3)0.10045 (19)0.0540 (5)
H100.33560.67960.12860.065*
C110.2545 (3)0.5414 (3)−0.00455 (17)0.0494 (5)
C120.2060 (3)0.3792 (3)−0.04551 (16)0.0523 (5)
H120.17250.3578−0.11600.063*
C130.2064 (3)0.2490 (3)0.01622 (14)0.0434 (4)
H130.17180.1404−0.01180.052*
C140.2506 (4)0.6822 (4)−0.0728 (2)0.0757 (8)
H14A0.36620.7798−0.05500.114*
H14B0.13800.7089−0.06350.114*
H14C0.24510.6474−0.14340.114*
N10.2229 (3)0.3722 (2)0.59984 (13)0.0499 (4)
N2−0.1975 (3)0.2944 (2)0.60016 (14)0.0537 (5)
N3−0.1278 (2)0.00328 (19)0.19798 (11)0.0396 (3)
N40.0489 (2)0.07838 (19)0.25754 (11)0.0361 (3)
O10.3506 (3)0.5014 (3)0.58078 (16)0.0959 (8)
O20.2091 (4)0.3122 (3)0.68252 (13)0.0874 (7)
O3−0.0949 (3)0.4309 (2)0.64245 (15)0.0780 (6)
O4−0.3607 (3)0.2146 (3)0.61839 (17)0.0944 (7)
O50.4057 (2)0.1788 (2)0.28403 (11)0.0491 (4)
O60.2305 (2)−0.02753 (18)0.14045 (12)0.0538 (4)
S10.25624 (6)0.11985 (6)0.20019 (3)0.03714 (16)
U11U22U33U12U13U23
C10.0385 (8)0.0306 (8)0.0282 (8)0.0145 (7)0.0030 (6)0.0020 (6)
C20.0380 (9)0.0381 (9)0.0325 (8)0.0140 (7)−0.0008 (7)−0.0007 (7)
C30.0487 (10)0.0311 (8)0.0301 (8)0.0145 (7)0.0004 (7)0.0002 (6)
C40.0540 (11)0.0348 (9)0.0329 (9)0.0200 (8)0.0128 (8)0.0052 (7)
C50.0400 (9)0.0410 (9)0.0396 (9)0.0160 (8)0.0096 (7)0.0059 (7)
C60.0357 (8)0.0326 (8)0.0337 (8)0.0126 (7)0.0028 (7)0.0038 (6)
C70.0359 (9)0.0423 (9)0.0384 (9)0.0112 (7)−0.0012 (7)−0.0009 (7)
C80.0316 (8)0.0409 (9)0.0322 (8)0.0157 (7)0.0053 (6)−0.0024 (7)
C90.0515 (11)0.0454 (10)0.0396 (10)0.0172 (9)0.0019 (8)−0.0073 (8)
C100.0575 (13)0.0419 (11)0.0643 (14)0.0192 (9)0.0102 (11)0.0015 (10)
C110.0371 (10)0.0604 (12)0.0581 (12)0.0230 (9)0.0183 (9)0.0208 (10)
C120.0515 (11)0.0751 (14)0.0351 (10)0.0277 (11)0.0092 (8)0.0092 (9)
C130.0475 (10)0.0515 (11)0.0322 (9)0.0193 (9)0.0057 (8)−0.0061 (8)
C140.0625 (15)0.0889 (19)0.094 (2)0.0421 (14)0.0337 (14)0.0504 (16)
N10.0650 (11)0.0446 (9)0.0355 (9)0.0168 (8)−0.0028 (8)−0.0076 (7)
N20.0717 (12)0.0547 (10)0.0418 (9)0.0282 (9)0.0205 (9)0.0028 (8)
N30.0415 (8)0.0407 (8)0.0332 (8)0.0129 (7)−0.0027 (6)−0.0040 (6)
N40.0360 (7)0.0409 (8)0.0298 (7)0.0127 (6)0.0015 (6)−0.0040 (6)
O10.0898 (15)0.0859 (14)0.0680 (12)−0.0171 (12)−0.0005 (11)−0.0216 (11)
O20.1383 (19)0.0776 (12)0.0387 (9)0.0375 (13)−0.0184 (10)0.0019 (8)
O30.1032 (15)0.0646 (11)0.0696 (11)0.0315 (10)0.0245 (11)−0.0176 (9)
O40.0930 (15)0.0952 (15)0.0867 (14)0.0130 (12)0.0569 (13)−0.0114 (12)
O50.0403 (7)0.0691 (9)0.0438 (7)0.0289 (7)−0.0017 (6)0.0018 (7)
O60.0701 (10)0.0486 (8)0.0543 (9)0.0339 (7)0.0137 (7)−0.0048 (7)
S10.0394 (3)0.0435 (3)0.0349 (2)0.0227 (2)0.00423 (18)−0.00191 (18)
C1—N41.377 (2)C10—C111.384 (3)
C1—C21.400 (2)C10—H100.9300
C1—C61.403 (2)C11—C121.387 (3)
C2—C31.370 (2)C11—C141.509 (3)
C2—H20.9300C12—C131.379 (3)
C3—C41.409 (3)C12—H120.9300
C3—N11.472 (2)C13—H130.9300
C4—C51.368 (3)C14—H14A0.9600
C4—N21.469 (2)C14—H14B0.9600
C5—C61.397 (2)C14—H14C0.9600
C5—H50.9300N1—O21.198 (2)
C6—C71.425 (2)N1—O11.211 (3)
C7—N31.298 (2)N2—O41.202 (3)
C7—H70.9300N2—O31.227 (3)
C8—C131.382 (2)N3—N41.383 (2)
C8—C91.392 (3)N4—S11.6992 (15)
C8—S11.7429 (18)O5—S11.4245 (14)
C9—C101.381 (3)O6—S11.4186 (14)
C9—H90.9300
N4—C1—C2132.03 (16)C10—C11—C14120.6 (2)
N4—C1—C6105.65 (15)C12—C11—C14120.8 (2)
C2—C1—C6122.32 (16)C13—C12—C11121.32 (19)
C3—C2—C1116.04 (16)C13—C12—H12119.3
C3—C2—H2122.0C11—C12—H12119.3
C1—C2—H2122.0C12—C13—C8118.61 (19)
C2—C3—C4122.37 (16)C12—C13—H13120.7
C2—C3—N1115.68 (17)C8—C13—H13120.7
C4—C3—N1121.92 (16)C11—C14—H14A109.5
C5—C4—C3121.29 (16)C11—C14—H14B109.5
C5—C4—N2117.78 (18)H14A—C14—H14B109.5
C3—C4—N2120.69 (17)C11—C14—H14C109.5
C4—C5—C6117.80 (17)H14A—C14—H14C109.5
C4—C5—H5121.1H14B—C14—H14C109.5
C6—C5—H5121.1O2—N1—O1124.8 (2)
C5—C6—C1120.16 (16)O2—N1—C3118.03 (18)
C5—C6—C7134.80 (17)O1—N1—C3117.08 (18)
C1—C6—C7105.00 (15)O4—N2—O3124.3 (2)
N3—C7—C6111.90 (16)O4—N2—C4118.2 (2)
N3—C7—H7124.1O3—N2—C4117.26 (19)
C6—C7—H7124.1C7—N3—N4106.16 (14)
C13—C8—C9121.71 (18)C1—N4—N3111.21 (14)
C13—C8—S1119.26 (14)C1—N4—S1128.92 (12)
C9—C8—S1119.01 (14)N3—N4—S1118.15 (11)
C10—C9—C8118.03 (18)O6—S1—O5121.02 (9)
C10—C9—H9121.0O6—S1—N4106.26 (8)
C8—C9—H9121.0O5—S1—N4103.11 (8)
C9—C10—C11121.7 (2)O6—S1—C8110.38 (9)
C9—C10—H10119.2O5—S1—C8110.65 (9)
C11—C10—H10119.2N4—S1—C8103.62 (8)
C10—C11—C12118.67 (19)
D—H···AD—HH···AD···AD—H···A
C5—H5···O5i0.932.613.175 (2)120
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C5—H5⋯O5i 0.932.613.175 (2)120

Symmetry code: (i) .

  9 in total

1.  Synthesis and biological evaluation of N-(7-indazolyl)benzenesulfonamide derivatives as potent cell cycle inhibitors.

Authors:  L Bouissane; S El Kazzouli; S Léonce; B Pfeiffer; E M Rakib; M Khouili; G Guillaumet
Journal:  Bioorg Med Chem       Date:  2005-11-07       Impact factor: 3.641

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis and preliminary biological evaluation of novel N-substituted 1-amino-3-[1-methyl(phenyl)-1H-indazol-4-yloxy]-propan-2-ols interesting as potential antiarrhythmic, local anaesthetic and analgesic agents.

Authors:  L Mosti; G Menozzi; P Fossa; W Filippelli; S Gessi; B Rinaldi; G Falcone
Journal:  Arzneimittelforschung       Date:  2000-11

4.  Synthesis, antiproliferative and apoptotic activities of N-(6(4)-indazolyl)-benzenesulfonamide derivatives as potential anticancer agents.

Authors:  Najat Abbassi; Hakima Chicha; El Mostapha Rakib; Abdellah Hannioui; Mdaghri Alaoui; Abdelouahed Hajjaji; Detlef Geffken; Cinzia Aiello; Rosaria Gangemi; Camillo Rosano; Maurizio Viale
Journal:  Eur J Med Chem       Date:  2012-09-17       Impact factor: 6.514

5.  A new alkaloid and its artificial derivative with an indazole ring from Nigella glandulifera.

Authors:  Yu-Ming Liu; Jun-Shan Yang; Qing-Hua Liu
Journal:  Chem Pharm Bull (Tokyo)       Date:  2004-04       Impact factor: 1.645

6.  Nigellidine-4-O-sulfite, the first sulfated indazole-type alkaloid from the seeds of Nigella sativa.

Authors:  Zulfiqar Ali; Daneel Ferreira; Paulo Carvalho; Mitchell A Avery; Ikhlas A Khan
Journal:  J Nat Prod       Date:  2008-05-10       Impact factor: 4.050

7.  Ethyl 3-[6-(4-meth-oxy-benzene-sulfon-amido)-2H-indazol-2-yl]propano-ate monohydrate.

Authors:  Najat Abbassi; El Mostapha Rakib; Abdellah Hannioui; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-01-09

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20

9.  N-(2-Allyl-4-chloro-2H-indazol-5-yl)-4-meth-oxy-benzene-sulfonamide hemi-hydrate.

Authors:  Hakima Chicha; Assoman Kouakou; El Mostapha Rakib; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-07-31
  9 in total

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