Literature DB >> 23424475

Ethyl 3-[6-(4-meth-oxy-benzene-sulfon-amido)-2H-indazol-2-yl]propano-ate monohydrate.

Najat Abbassi1, El Mostapha Rakib, Abdellah Hannioui, Mohamed Saadi, Lahcen El Ammari.   

Abstract

In the title compound, C(19)H(21)N(3)O(5)S·H(2)O, the central indazole system is essentially planar (r.m.s. deviation = 0.012 Å), while both the benzene ring and the mean plane defined by the non-H atoms of the ethyl propionic ester unit (r.m.s. deviation = 0.087 Å) are nearly perpendicular to the indazole plane, as indicated by the dihedral angles of 82.45 (8) and 75.62 (8)°, respectively. Consequently, the mol-ecule adopts a U-shaped geometry. In the crystal, the water mol-ecule, which is linked to the indazole system by a strong O-H⋯N hydrogen bond, is also involved in two additional N-H⋯O and O-H⋯O inter-actions, which link the organic mol-ecules into chains along the b-axis direction.

Entities:  

Year:  2013        PMID: 23424475      PMCID: PMC3569252          DOI: 10.1107/S1600536812051975

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of sulfonamides, see: Gadad et al. (2000 ▶); Brzozowski et al. (2010 ▶); Drew (2000 ▶); Garaj et al. (2005 ▶). For their anti­proliferative activity see: Abbassi et al. (2012 ▶); Bouissane et al. (2006 ▶).

Experimental

Crystal data

C19H21N3O5S·n class="Chemical">H2O M = 421.46 Monoclinic, a = 9.0248 (3) Å b = 8.7602 (3) Å c = 13.1792 (4) Å β = 101.062 (2)° V = 1022.58 (6) Å3 Z = 2 Mo Kα radiation μ = 0.20 mm−1 T = 296 K 0.42 × 0.37 × 0.28 mm

Data collection

Bruker X8 APEX diffractometer 10050 measured reflections 4021 independent reflections 3887 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.077 S = 1.05 4021 reflections 262 parameters 1 restraint H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.28 e Å−3 Absolute structure: Flack (1983 ▶), 1779 Friedel pairs Flack parameter: 0.03 (6) Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: n class="CellLine">SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶) and publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812051975/lr2095sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812051975/lr2095Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812051975/lr2095Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H21N3O5S·H2OF(000) = 444
Mr = 421.46Dx = 1.369 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: p 2ybCell parameters from 4021 reflections
a = 9.0248 (3) Åθ = 2.3–26.4°
b = 8.7602 (3) ŵ = 0.20 mm1
c = 13.1792 (4) ÅT = 296 K
β = 101.062 (2)°Block, colourless
V = 1022.58 (6) Å30.42 × 0.37 × 0.28 mm
Z = 2
Bruker X8 APEX diffractometer3887 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.027
Graphite monochromatorθmax = 26.4°, θmin = 2.3°
φ and ω scansh = −11→11
10050 measured reflectionsk = −10→10
4021 independent reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.031H-atom parameters constrained
wR(F2) = 0.077w = 1/[σ2(Fo2) + (0.037P)2 + 0.2529P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
4021 reflectionsΔρmax = 0.28 e Å3
262 parametersΔρmin = −0.28 e Å3
1 restraintAbsolute structure: Flack (1983), 1779 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.03 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against all reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on all data will be even larger.
xyzUiso*/Ueq
C10.75199 (19)0.7888 (2)0.11333 (12)0.0197 (4)
C20.61152 (18)0.8667 (2)0.10899 (12)0.0216 (3)
H20.60950.97260.10390.026*
C30.4816 (2)0.7914 (2)0.11201 (13)0.0223 (4)
H30.39090.84380.10710.027*
C40.48733 (19)0.6302 (2)0.12290 (12)0.0202 (3)
C50.62772 (18)0.5536 (2)0.12955 (12)0.0191 (3)
C60.76182 (19)0.6328 (2)0.12325 (13)0.0214 (4)
H60.85280.58170.12570.026*
C70.3845 (2)0.5150 (2)0.13056 (13)0.0215 (4)
H70.28150.52680.12830.026*
C80.4016 (2)0.2317 (2)0.15290 (14)0.0241 (4)
H8A0.43220.16430.10220.029*
H8B0.29210.23630.13860.029*
C90.4548 (2)0.1655 (2)0.25982 (14)0.0273 (4)
H9A0.42990.05770.25860.033*
H9B0.56380.17460.27820.033*
C100.3852 (2)0.2433 (2)0.34120 (15)0.0316 (4)
C110.3662 (4)0.2412 (4)0.5169 (2)0.0783 (11)
H11A0.41100.34010.53630.094*
H11B0.25810.25460.49500.094*
C120.3972 (3)0.1377 (5)0.6044 (2)0.0764 (10)
H12A0.35210.17670.65940.115*
H12B0.50430.12900.62770.115*
H12C0.35560.03910.58390.115*
C131.07596 (19)0.8265 (2)0.27877 (13)0.0236 (4)
C141.1631 (2)0.7069 (2)0.32717 (15)0.0309 (4)
H141.20390.63510.28840.037*
C151.1882 (2)0.6960 (3)0.43361 (15)0.0355 (5)
H151.24870.61790.46680.043*
C161.1239 (2)0.8006 (2)0.49155 (15)0.0304 (4)
C171.0371 (3)0.9201 (3)0.44266 (16)0.0367 (5)
H170.99440.99080.48120.044*
C181.0144 (2)0.9330 (2)0.33620 (16)0.0342 (5)
H180.95771.01360.30310.041*
C191.0760 (3)0.8738 (3)0.65678 (15)0.0430 (6)
H19A1.09060.83510.72610.065*
H19B0.97000.87640.62760.065*
H19C1.11670.97510.65760.065*
N10.87396 (16)0.88540 (16)0.10220 (11)0.0222 (3)
H10.86090.97620.10440.027*
N20.61166 (17)0.40098 (17)0.14153 (11)0.0224 (3)
N30.46167 (16)0.38390 (16)0.14178 (10)0.0202 (3)
O11.08832 (15)0.70535 (16)0.10224 (10)0.0269 (3)
O21.13045 (15)0.98256 (17)0.12154 (11)0.0315 (3)
O30.29906 (17)0.3482 (2)0.32659 (11)0.0450 (4)
O40.4297 (2)0.1772 (2)0.43247 (11)0.0520 (5)
O51.15167 (18)0.77637 (19)0.59538 (11)0.0411 (4)
O60.83323 (15)0.19739 (15)0.10176 (10)0.0297 (3)
H6A0.76330.25650.11510.036*
H6B0.84880.22800.04270.036*
S11.05094 (4)0.84904 (5)0.14406 (3)0.02171 (10)
U11U22U33U12U13U23
C10.0167 (9)0.0247 (8)0.0181 (8)0.0017 (7)0.0040 (7)−0.0004 (6)
C20.0208 (8)0.0207 (8)0.0237 (8)0.0050 (7)0.0055 (6)0.0004 (7)
C30.0171 (9)0.0250 (8)0.0257 (9)0.0078 (7)0.0061 (7)0.0006 (7)
C40.0192 (9)0.0241 (9)0.0173 (8)0.0040 (7)0.0038 (7)0.0000 (6)
C50.0181 (8)0.0219 (8)0.0166 (8)0.0047 (7)0.0015 (6)0.0002 (6)
C60.0157 (8)0.0243 (9)0.0243 (9)0.0078 (7)0.0044 (7)0.0019 (7)
C70.0192 (9)0.0253 (9)0.0202 (8)0.0051 (7)0.0044 (7)−0.0011 (7)
C80.0209 (9)0.0225 (9)0.0287 (9)−0.0006 (7)0.0043 (7)−0.0027 (7)
C90.0273 (10)0.0234 (9)0.0319 (10)0.0020 (7)0.0073 (8)0.0031 (7)
C100.0330 (11)0.0330 (10)0.0309 (10)0.0010 (9)0.0112 (8)0.0053 (8)
C110.110 (3)0.097 (2)0.0363 (14)0.036 (2)0.0350 (16)0.0102 (15)
C120.0642 (19)0.129 (3)0.0388 (14)−0.015 (2)0.0174 (13)0.0096 (17)
C130.0187 (8)0.0259 (9)0.0256 (8)−0.0004 (7)0.0026 (7)−0.0019 (7)
C140.0290 (11)0.0319 (10)0.0319 (10)0.0091 (8)0.0062 (8)0.0010 (8)
C150.0344 (11)0.0375 (11)0.0334 (10)0.0094 (9)0.0033 (9)0.0082 (9)
C160.0251 (10)0.0354 (10)0.0289 (10)−0.0046 (7)0.0010 (8)0.0003 (7)
C170.0404 (12)0.0377 (11)0.0321 (10)0.0088 (9)0.0072 (9)−0.0068 (8)
C180.0362 (12)0.0331 (10)0.0319 (10)0.0124 (9)0.0028 (9)−0.0011 (8)
C190.0374 (12)0.0635 (17)0.0277 (10)−0.0016 (11)0.0051 (8)−0.0046 (10)
N10.0180 (8)0.0188 (7)0.0298 (7)0.0047 (5)0.0047 (6)0.0040 (6)
N20.0190 (8)0.0228 (7)0.0259 (7)0.0033 (6)0.0053 (6)0.0013 (6)
N30.0178 (7)0.0217 (8)0.0209 (7)0.0018 (6)0.0033 (5)0.0001 (5)
O10.0208 (7)0.0314 (7)0.0300 (7)0.0056 (6)0.0084 (5)−0.0007 (6)
O20.0203 (7)0.0324 (7)0.0438 (8)−0.0005 (6)0.0114 (6)0.0073 (6)
O30.0536 (9)0.0433 (8)0.0434 (8)0.0182 (9)0.0227 (7)0.0073 (8)
O40.0646 (11)0.0640 (11)0.0303 (8)0.0236 (9)0.0165 (8)0.0126 (7)
O50.0444 (9)0.0506 (9)0.0262 (8)0.0047 (7)0.0020 (6)0.0013 (6)
O60.0334 (8)0.0249 (7)0.0335 (7)0.0082 (6)0.0133 (6)0.0030 (5)
S10.0152 (2)0.0246 (2)0.0263 (2)0.00303 (17)0.00648 (15)0.00187 (18)
C1—C61.374 (2)C12—H12A0.9600
C1—N11.418 (2)C12—H12B0.9600
C1—C21.431 (2)C12—H12C0.9600
C2—C31.353 (3)C13—C181.383 (2)
C2—H20.9300C13—C141.390 (3)
C3—C41.419 (2)C13—S11.7572 (17)
C3—H30.9300C14—C151.381 (3)
C4—C71.387 (2)C14—H140.9300
C4—C51.422 (2)C15—C161.389 (3)
C5—N21.357 (2)C15—H150.9300
C5—C61.411 (2)C16—O51.360 (2)
C6—H60.9300C16—C171.390 (3)
C7—N31.337 (2)C17—C181.383 (3)
C7—H70.9300C17—H170.9300
C8—N31.458 (2)C18—H180.9300
C8—C91.514 (3)C19—O51.436 (3)
C8—H8A0.9700C19—H19A0.9600
C8—H8B0.9700C19—H19B0.9600
C9—C101.506 (3)C19—H19C0.9600
C9—H9A0.9700N1—S11.6183 (14)
C9—H9B0.9700N1—H10.8050
C10—O31.196 (3)N2—N31.363 (2)
C10—O41.326 (2)O1—S11.4399 (14)
C11—C121.451 (4)O2—S11.4327 (14)
C11—O41.458 (3)O6—H6A0.8601
C11—H11A0.9700O6—H6B0.8600
C11—H11B0.9700
C6—C1—N1124.49 (16)H12A—C12—H12B109.5
C6—C1—C2121.23 (17)C11—C12—H12C109.5
N1—C1—C2114.23 (15)H12A—C12—H12C109.5
C3—C2—C1122.16 (17)H12B—C12—H12C109.5
C3—C2—H2118.9C18—C13—C14120.58 (17)
C1—C2—H2118.9C18—C13—S1119.33 (14)
C2—C3—C4118.27 (17)C14—C13—S1120.01 (14)
C2—C3—H3120.9C15—C14—C13119.13 (18)
C4—C3—H3120.9C15—C14—H14120.4
C7—C4—C3135.97 (17)C13—C14—H14120.4
C7—C4—C5104.64 (15)C14—C15—C16120.55 (19)
C3—C4—C5119.38 (16)C14—C15—H15119.7
N2—C5—C6127.09 (15)C16—C15—H15119.7
N2—C5—C4111.00 (15)O5—C16—C15115.76 (18)
C6—C5—C4121.91 (16)O5—C16—C17124.24 (18)
C1—C6—C5117.01 (16)C15—C16—C17120.01 (18)
C1—C6—H6121.5C18—C17—C16119.51 (18)
C5—C6—H6121.5C18—C17—H17120.2
N3—C7—C4106.95 (15)C16—C17—H17120.2
N3—C7—H7126.5C17—C18—C13120.20 (18)
C4—C7—H7126.5C17—C18—H18119.9
N3—C8—C9112.72 (15)C13—C18—H18119.9
N3—C8—H8A109.0O5—C19—H19A109.5
C9—C8—H8A109.0O5—C19—H19B109.5
N3—C8—H8B109.0H19A—C19—H19B109.5
C9—C8—H8B109.0O5—C19—H19C109.5
H8A—C8—H8B107.8H19A—C19—H19C109.5
C10—C9—C8112.84 (16)H19B—C19—H19C109.5
C10—C9—H9A109.0C1—N1—S1125.60 (12)
C8—C9—H9A109.0C1—N1—H1117.6
C10—C9—H9B109.0S1—N1—H1108.9
C8—C9—H9B109.0C5—N2—N3103.70 (13)
H9A—C9—H9B107.8C7—N3—N2113.70 (14)
O3—C10—O4123.80 (19)C7—N3—C8126.97 (15)
O3—C10—C9125.49 (18)N2—N3—C8119.33 (14)
O4—C10—C9110.70 (17)C10—O4—C11115.4 (2)
C12—C11—O4108.8 (3)C16—O5—C19117.30 (17)
C12—C11—H11A109.9H6A—O6—H6B104.5
O4—C11—H11A109.9O2—S1—O1118.09 (7)
C12—C11—H11B109.9O2—S1—N1105.63 (8)
O4—C11—H11B109.9O1—S1—N1109.27 (8)
H11A—C11—H11B108.3O2—S1—C13109.18 (9)
C11—C12—H12A109.5O1—S1—C13107.13 (8)
C11—C12—H12B109.5N1—S1—C13107.07 (8)
C6—C1—C2—C3−1.5 (3)C14—C13—C18—C17−1.1 (3)
N1—C1—C2—C3175.96 (15)S1—C13—C18—C17−177.88 (17)
C1—C2—C3—C41.9 (3)C6—C1—N1—S1−26.6 (2)
C2—C3—C4—C7178.80 (18)C2—C1—N1—S1155.99 (12)
C2—C3—C4—C5−0.4 (3)C6—C5—N2—N3−179.35 (15)
C7—C4—C5—N2−0.54 (19)C4—C5—N2—N30.25 (18)
C3—C4—C5—N2178.89 (15)C4—C7—N3—N2−0.50 (19)
C7—C4—C5—C6179.08 (15)C4—C7—N3—C8179.99 (15)
C3—C4—C5—C6−1.5 (2)C5—N2—N3—C70.16 (18)
N1—C1—C6—C5−177.59 (14)C5—N2—N3—C8179.70 (14)
C2—C1—C6—C5−0.4 (2)C9—C8—N3—C7−111.10 (19)
N2—C5—C6—C1−178.61 (17)C9—C8—N3—N269.41 (19)
C4—C5—C6—C11.8 (2)O3—C10—O4—C110.0 (4)
C3—C4—C7—N3−178.7 (2)C9—C10—O4—C11−178.6 (2)
C5—C4—C7—N30.61 (18)C12—C11—O4—C10167.3 (3)
N3—C8—C9—C1070.9 (2)C15—C16—O5—C19−174.48 (19)
C8—C9—C10—O3−1.3 (3)C17—C16—O5—C195.2 (3)
C8—C9—C10—O4177.17 (17)C1—N1—S1—O2−176.12 (14)
C18—C13—C14—C15−0.3 (3)C1—N1—S1—O155.87 (16)
S1—C13—C14—C15176.48 (16)C1—N1—S1—C13−59.84 (16)
C13—C14—C15—C161.8 (3)C18—C13—S1—O266.47 (17)
C14—C15—C16—O5177.83 (19)C14—C13—S1—O2−110.37 (16)
C14—C15—C16—C17−1.9 (3)C18—C13—S1—O1−164.56 (15)
O5—C16—C17—C18−179.2 (2)C14—C13—S1—O118.60 (18)
C15—C16—C17—C180.5 (3)C18—C13—S1—N1−47.44 (18)
C16—C17—C18—C131.0 (3)C14—C13—S1—N1135.72 (15)
D—H···AD—HH···AD···AD—H···A
O6—H6A···N20.861.942.8029 (19)176
N1—H1···O6i0.811.952.7575 (19)177
O6—H6B···O1ii0.862.102.9094 (17)156
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O6—H6A⋯N20.861.942.8029 (19)176
N1—H1⋯O6i 0.811.952.7575 (19)177
O6—H6B⋯O1ii 0.862.102.9094 (17)156

Symmetry codes: (i) ; (ii) .

  7 in total

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  7 in total
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2.  N-(3-Chloro-1-methyl-1H-indazol-5-yl)-4-methylbenzene-sulfonamide.

Authors:  Hakima Chicha; El Mostapha Rakib; Ouafa Amiri; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-01-22

3.  N-(1-Allyl-1H-indazol-5-yl)-4-methyl-benzene-sulfonamide.

Authors:  Hakima Chicha; El Mostapha Rakib; Hafid Abderrafia; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-11-30

4.  N-(1H-Indazol-5-yl)-4-meth-oxy-benzene-sulfonamide.

Authors:  Hakima Chicha; El Mostapha Rakib; Latifa Bouissane; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-10-26

5.  N-(3-Chloro-1H-indazol-5-yl)-4-meth-oxy-benzene-sulfonamide.

Authors:  Hakima Chicha; El Mostapha Rakib; Latifa Bouissane; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-10-12

6.  N-(2-Allyl-4-chloro-2H-indazol-5-yl)-4-meth-oxy-benzene-sulfonamide hemi-hydrate.

Authors:  Hakima Chicha; Assoman Kouakou; El Mostapha Rakib; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-07-31

7.  N-(1-Allyl-1H-indazol-5-yl)-4-meth-oxy-benzene-sulfonamide hemihydrate.

Authors:  Hakima Chicha; El Mostapha Rakib; Detlef Geffken; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-09-28

8.  1-(4-Methyl-phenyl-sulfon-yl)-5,6-di-nitro-1H-indazole.

Authors:  Bassou Oulemda; El Mostapha Rakib; Najat Abbassi; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-12-24

9.  4-Meth-oxy-N-(1-methyl-1H-indazol-5-yl)benzene-sulfonamide.

Authors:  Hakima Chicha; El Mostapha Rakib; Detlef Geffken; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-08-07

10.  4-Methyl-N-(1-methyl-1H-indazol-5-yl)benzene-sulfonamide.

Authors:  Hakima Chicha; Bassou Oulemda; El Mostapha Rakib; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-08-23
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