Literature DB >> 24109418

N-(2-Allyl-4-chloro-2H-indazol-5-yl)-4-meth-oxy-benzene-sulfonamide hemi-hydrate.

Hakima Chicha1, Assoman Kouakou, El Mostapha Rakib, Mohamed Saadi, Lahcen El Ammari.   

Abstract

The fused five- and six-membered rings in the title compound, C17H16ClN3O3S·0.5H2O, are practically coplanar, with the maximum deviation from the mean plane being 0.057 (3) Å for the C atom bound to the exocyclic N atom. The indazole system makes a dihedral angle of 66.18 (12)° with the plane through the benzene ring, and it is nearly perpendicular to the allyl group, as indicated by the N-N-C-C torsion angle of 79.2 (3)°. In the crystal, the water mol-ecule, lying on a twofold axis, forms O-H⋯N and accepts N-H⋯O hydrogen bonds. Additional C-H⋯O hydrogen bonds contribute to the formation of a chain along the b-axis direction.

Entities:  

Year:  2013        PMID: 24109418      PMCID: PMC3793831          DOI: 10.1107/S1600536813020606

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of sulfonamides, see: Brzozowski et al. (2010 ▶); Drew (2000 ▶); Garaj et al. (2005 ▶); Lopez et al. (2010 ▶). For similar compounds, see: Abbassi et al. (2012 ▶, 2013 ▶).

Experimental

Crystal data

C17H16ClN3O3S·0.5H2O M = 386.86 Monoclinic, a = 23.5515 (9) Å b = 8.9081 (3) Å c = 20.8278 (8) Å β = 122.628 (2)° V = 3680.1 (2) Å3 Z = 8 Mo Kα radiation μ = 0.35 mm−1 T = 296 K 0.41 × 0.38 × 0.27 mm

Data collection

Bruker X8 APEX diffractometer 20391 measured reflections 4389 independent reflections 2740 reflections with I > 2σ(I) R int = 0.057

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.122 S = 1.02 4389 reflections 231 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.33 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536813020606/tk5244sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813020606/tk5244Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813020606/tk5244Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H16ClN3O3S·0.5H2OF(000) = 1608
Mr = 386.86Dx = 1.396 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 4389 reflections
a = 23.5515 (9) Åθ = 2.5–27.9°
b = 8.9081 (3) ŵ = 0.35 mm1
c = 20.8278 (8) ÅT = 296 K
β = 122.628 (2)°Block, colourless
V = 3680.1 (2) Å30.41 × 0.38 × 0.27 mm
Z = 8
Bruker X8 APEX diffractometer2740 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.057
Graphite monochromatorθmax = 27.9°, θmin = 2.5°
φ and ω scansh = −30→29
20391 measured reflectionsk = −11→11
4389 independent reflectionsl = −25→27
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.122H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0457P)2 + 2.416P] where P = (Fo2 + 2Fc2)/3
4389 reflections(Δ/σ)max < 0.001
231 parametersΔρmax = 0.34 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against all reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on all data will be even larger.
xyzUiso*/Ueq
C10.07686 (11)0.1101 (2)0.24133 (13)0.0363 (5)
C20.06759 (12)−0.0223 (3)0.19808 (14)0.0434 (6)
H20.0569−0.01210.14830.052*
C30.07383 (13)−0.1630 (3)0.22687 (14)0.0457 (6)
H30.0688−0.24760.19810.055*
C40.08816 (12)−0.1761 (3)0.30157 (13)0.0402 (5)
C50.09891 (11)−0.0468 (2)0.34607 (13)0.0369 (5)
C60.09541 (11)0.0968 (2)0.31577 (13)0.0361 (5)
C70.10847 (12)−0.1007 (3)0.41405 (14)0.0458 (6)
H70.1169−0.04410.45580.055*
C80.11049 (16)−0.3571 (3)0.46422 (16)0.0612 (8)
H8A0.0770−0.43580.43940.073*
H8B0.1028−0.30650.50010.073*
C90.1797 (2)−0.4252 (4)0.5063 (2)0.0854 (11)
H90.1947−0.46790.47730.103*
C100.2188 (2)−0.4290 (6)0.5770 (3)0.1285 (17)
H10A0.2056−0.38740.60800.154*
H10B0.2610−0.47340.59870.154*
C110.19083 (12)0.3430 (3)0.25760 (13)0.0404 (5)
C120.23937 (14)0.2387 (3)0.27121 (15)0.0517 (7)
H120.22880.16070.23690.062*
C130.30364 (14)0.2495 (3)0.33557 (15)0.0521 (7)
H130.33640.17960.34430.062*
C140.31891 (13)0.3638 (3)0.38665 (14)0.0448 (6)
C150.26970 (14)0.4682 (3)0.37284 (15)0.0555 (7)
H150.28020.54610.40720.067*
C160.20606 (13)0.4575 (3)0.30924 (15)0.0514 (7)
H160.17320.52690.30080.062*
C170.43186 (15)0.2760 (4)0.47218 (17)0.0706 (9)
H17A0.47220.30570.51890.106*
H17B0.44090.26880.43250.106*
H17C0.41710.18020.47900.106*
N10.06279 (10)0.2526 (2)0.20483 (11)0.0415 (5)
H10.04730.31770.22000.050*
N20.09126 (11)−0.3021 (2)0.33985 (12)0.0491 (5)
N30.10311 (11)−0.2499 (2)0.40710 (12)0.0481 (5)
O10.08137 (9)0.47240 (19)0.14958 (10)0.0602 (5)
O20.11154 (9)0.2212 (2)0.12606 (10)0.0550 (5)
O30.38047 (10)0.3849 (2)0.45159 (10)0.0651 (6)
O40.0000−0.5316 (2)0.25000.0455 (6)
H40.0324−0.48000.28680.055*
S10.10886 (3)0.32522 (7)0.17658 (3)0.04380 (18)
Cl10.11387 (4)0.25023 (7)0.37487 (4)0.0539 (2)
U11U22U33U12U13U23
C10.0325 (12)0.0362 (11)0.0432 (14)−0.0015 (9)0.0224 (10)−0.0012 (10)
C20.0502 (15)0.0461 (13)0.0395 (14)−0.0016 (11)0.0279 (12)−0.0045 (11)
C30.0548 (15)0.0385 (13)0.0473 (15)−0.0058 (11)0.0299 (13)−0.0112 (11)
C40.0418 (13)0.0355 (12)0.0426 (13)−0.0036 (10)0.0223 (11)−0.0035 (10)
C50.0334 (12)0.0374 (12)0.0354 (12)−0.0021 (10)0.0156 (10)−0.0031 (10)
C60.0328 (12)0.0341 (11)0.0399 (13)−0.0014 (9)0.0186 (10)−0.0063 (10)
C70.0488 (15)0.0420 (13)0.0425 (14)−0.0026 (11)0.0220 (12)−0.0046 (11)
C80.078 (2)0.0522 (15)0.0503 (16)−0.0095 (15)0.0324 (15)0.0060 (13)
C90.113 (3)0.069 (2)0.060 (2)0.022 (2)0.038 (2)0.0236 (18)
C100.090 (3)0.168 (5)0.130 (4)0.029 (3)0.061 (3)0.046 (4)
C110.0413 (13)0.0437 (13)0.0389 (13)−0.0031 (11)0.0233 (11)0.0003 (11)
C120.0509 (16)0.0530 (15)0.0490 (16)−0.0001 (12)0.0255 (13)−0.0111 (12)
C130.0469 (15)0.0546 (15)0.0521 (16)0.0088 (12)0.0250 (13)−0.0044 (13)
C140.0446 (14)0.0488 (14)0.0360 (13)−0.0008 (11)0.0185 (11)0.0006 (11)
C150.0555 (17)0.0510 (15)0.0479 (16)0.0041 (13)0.0200 (13)−0.0123 (12)
C160.0516 (16)0.0462 (14)0.0530 (16)0.0083 (12)0.0259 (13)−0.0020 (12)
C170.0550 (18)0.085 (2)0.0531 (18)0.0131 (16)0.0170 (15)0.0047 (16)
N10.0426 (11)0.0384 (10)0.0480 (12)0.0044 (9)0.0272 (10)0.0030 (9)
N20.0621 (14)0.0374 (10)0.0467 (13)−0.0070 (10)0.0285 (11)−0.0033 (10)
N30.0580 (14)0.0422 (11)0.0400 (12)−0.0039 (10)0.0238 (11)0.0007 (10)
O10.0570 (11)0.0533 (11)0.0583 (12)0.0038 (9)0.0232 (10)0.0218 (9)
O20.0580 (12)0.0709 (12)0.0423 (10)−0.0083 (9)0.0311 (9)−0.0085 (9)
O30.0547 (12)0.0710 (12)0.0449 (11)0.0067 (10)0.0106 (9)−0.0085 (9)
O40.0490 (14)0.0278 (11)0.0537 (15)0.0000.0238 (12)0.000
S10.0435 (3)0.0467 (3)0.0391 (3)−0.0030 (3)0.0210 (3)0.0045 (3)
Cl10.0702 (5)0.0371 (3)0.0480 (4)0.0009 (3)0.0275 (3)−0.0084 (3)
C1—C61.371 (3)C11—C121.379 (3)
C1—N11.423 (3)C11—C161.382 (3)
C1—C21.428 (3)C11—S11.757 (2)
C2—C31.363 (3)C12—C131.382 (4)
C2—H20.9300C12—H120.9300
C3—C41.408 (3)C13—C141.373 (3)
C3—H30.9300C13—H130.9300
C4—N21.356 (3)C14—O31.361 (3)
C4—C51.413 (3)C14—C151.390 (4)
C5—C71.393 (3)C15—C161.367 (3)
C5—C61.409 (3)C15—H150.9300
C6—Cl11.731 (2)C16—H160.9300
C7—N31.336 (3)C17—O31.425 (3)
C7—H70.9300C17—H17A0.9600
C8—N31.461 (3)C17—H17B0.9600
C8—C91.501 (5)C17—H17C0.9600
C8—H8A0.9700N1—S11.622 (2)
C8—H8B0.9700N1—H10.8338
C9—C101.247 (5)N2—N31.355 (3)
C9—H90.9300O1—S11.4359 (18)
C10—H10A0.9300O2—S11.4286 (18)
C10—H10B0.9300O4—H40.8662
C6—C1—N1121.5 (2)C11—C12—C13120.4 (2)
C6—C1—C2119.3 (2)C11—C12—H12119.8
N1—C1—C2119.2 (2)C13—C12—H12119.8
C3—C2—C1122.6 (2)C14—C13—C12119.7 (2)
C3—C2—H2118.7C14—C13—H13120.2
C1—C2—H2118.7C12—C13—H13120.2
C2—C3—C4117.9 (2)O3—C14—C13124.5 (2)
C2—C3—H3121.1O3—C14—C15115.9 (2)
C4—C3—H3121.1C13—C14—C15119.7 (2)
N2—C4—C3128.5 (2)C16—C15—C14120.7 (2)
N2—C4—C5110.8 (2)C16—C15—H15119.7
C3—C4—C5120.6 (2)C14—C15—H15119.7
C7—C5—C6134.9 (2)C15—C16—C11119.6 (2)
C7—C5—C4105.0 (2)C15—C16—H16120.2
C6—C5—C4120.0 (2)C11—C16—H16120.2
C1—C6—C5119.4 (2)O3—C17—H17A109.5
C1—C6—Cl1122.73 (17)O3—C17—H17B109.5
C5—C6—Cl1117.83 (18)H17A—C17—H17B109.5
N3—C7—C5106.2 (2)O3—C17—H17C109.5
N3—C7—H7126.9H17A—C17—H17C109.5
C5—C7—H7126.9H17B—C17—H17C109.5
N3—C8—C9110.7 (3)C1—N1—S1122.73 (16)
N3—C8—H8A109.5C1—N1—H1116.2
C9—C8—H8A109.5S1—N1—H1112.1
N3—C8—H8B109.5N3—N2—C4103.84 (18)
C9—C8—H8B109.5C7—N3—N2114.1 (2)
H8A—C8—H8B108.1C7—N3—C8126.8 (2)
C10—C9—C8125.3 (4)N2—N3—C8119.0 (2)
C10—C9—H9117.4C14—O3—C17118.8 (2)
C8—C9—H9117.4O2—S1—O1119.55 (12)
C9—C10—H10A120.0O2—S1—N1108.20 (11)
C9—C10—H10B120.0O1—S1—N1104.94 (11)
H10A—C10—H10B120.0O2—S1—C11107.69 (12)
C12—C11—C16119.9 (2)O1—S1—C11108.89 (11)
C12—C11—S1119.78 (19)N1—S1—C11106.92 (11)
C16—C11—S1120.25 (19)
C6—C1—C2—C32.7 (4)C13—C14—C15—C160.6 (4)
N1—C1—C2—C3−173.7 (2)C14—C15—C16—C11−1.0 (4)
C1—C2—C3—C41.8 (4)C12—C11—C16—C151.3 (4)
C2—C3—C4—N2174.2 (2)S1—C11—C16—C15178.7 (2)
C2—C3—C4—C5−3.0 (4)C6—C1—N1—S1114.3 (2)
N2—C4—C5—C7−0.3 (3)C2—C1—N1—S1−69.4 (3)
C3—C4—C5—C7177.4 (2)C3—C4—N2—N3−176.8 (2)
N2—C4—C5—C6−177.8 (2)C5—C4—N2—N30.6 (3)
C3—C4—C5—C6−0.1 (3)C5—C7—N3—N20.6 (3)
N1—C1—C6—C5170.4 (2)C5—C7—N3—C8178.8 (2)
C2—C1—C6—C5−5.8 (3)C4—N2—N3—C7−0.8 (3)
N1—C1—C6—Cl1−8.6 (3)C4—N2—N3—C8−179.2 (2)
C2—C1—C6—Cl1175.13 (17)C9—C8—N3—C7−99.0 (3)
C7—C5—C6—C1−171.9 (3)C9—C8—N3—N279.2 (3)
C4—C5—C6—C14.6 (3)C13—C14—O3—C17−5.1 (4)
C7—C5—C6—Cl17.2 (4)C15—C14—O3—C17175.5 (3)
C4—C5—C6—Cl1−176.30 (18)C1—N1—S1—O256.3 (2)
C6—C5—C7—N3176.7 (3)C1—N1—S1—O1−175.03 (18)
C4—C5—C7—N3−0.2 (3)C1—N1—S1—C11−59.5 (2)
N3—C8—C9—C10127.3 (4)C12—C11—S1—O2−15.3 (2)
C16—C11—C12—C13−1.2 (4)C16—C11—S1—O2167.2 (2)
S1—C11—C12—C13−178.6 (2)C12—C11—S1—O1−146.4 (2)
C11—C12—C13—C140.7 (4)C16—C11—S1—O136.2 (2)
C12—C13—C14—O3−179.9 (3)C12—C11—S1—N1100.7 (2)
C12—C13—C14—C15−0.4 (4)C16—C11—S1—N1−76.7 (2)
O3—C14—C15—C16−180.0 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1···O4i0.832.042.875 (2)174
O4—H4···N20.872.002.822 (2)158
C7—H7···O3ii0.932.373.288 (3)170
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O4i 0.832.042.875 (2)174
O4—H4⋯N20.872.002.822 (2)158
C7—H7⋯O3ii 0.932.373.288 (3)170

Symmetry codes: (i) ; (ii) .

  7 in total

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3.  Carbonic anhydrase inhibitors: novel sulfonamides incorporating 1,3,5-triazine moieties as inhibitors of the cytosolic and tumour-associated carbonic anhydrase isozymes I, II and IX.

Authors:  Vladimir Garaj; Luca Puccetti; Giuseppe Fasolis; Jean-Yves Winum; Jean-Louis Montero; Andrea Scozzafava; Daniela Vullo; Alessio Innocenti; Claudiu T Supuran
Journal:  Bioorg Med Chem Lett       Date:  2005-06-15       Impact factor: 2.823

4.  Sulfonamide linked neoglycoconjugates--a new class of inhibitors for cancer-associated carbonic anhydrases.

Authors:  Marie Lopez; Laurent F Bornaghi; Alessio Innocenti; Daniela Vullo; Susan A Charman; Claudiu T Supuran; Sally-Ann Poulsen
Journal:  J Med Chem       Date:  2010-04-08       Impact factor: 7.446

5.  Synthesis, antiproliferative and apoptotic activities of N-(6(4)-indazolyl)-benzenesulfonamide derivatives as potential anticancer agents.

Authors:  Najat Abbassi; Hakima Chicha; El Mostapha Rakib; Abdellah Hannioui; Mdaghri Alaoui; Abdelouahed Hajjaji; Detlef Geffken; Cinzia Aiello; Rosaria Gangemi; Camillo Rosano; Maurizio Viale
Journal:  Eur J Med Chem       Date:  2012-09-17       Impact factor: 6.514

6.  Ethyl 3-[6-(4-meth-oxy-benzene-sulfon-amido)-2H-indazol-2-yl]propano-ate monohydrate.

Authors:  Najat Abbassi; El Mostapha Rakib; Abdellah Hannioui; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-01-09

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total
  7 in total

1.  Ethyl 3-[7-(N-acetyl-4-meth-oxy-benzene-sulfonamido)-3-chloro-2H-indazol-2-yl]propionate.

Authors:  Assoman Kouakou; El Mostapha Rakib; Najat Abbassi; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-02-15

2.  N-(3-Chloro-1-methyl-1H-indazol-5-yl)-4-methylbenzene-sulfonamide.

Authors:  Hakima Chicha; El Mostapha Rakib; Ouafa Amiri; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-01-22

3.  N-(1-Allyl-1H-indazol-5-yl)-4-methyl-benzene-sulfonamide.

Authors:  Hakima Chicha; El Mostapha Rakib; Hafid Abderrafia; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-11-30

4.  N-(1H-Indazol-5-yl)-4-meth-oxy-benzene-sulfonamide.

Authors:  Hakima Chicha; El Mostapha Rakib; Latifa Bouissane; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-10-26

5.  N-(3-Chloro-1H-indazol-5-yl)-4-meth-oxy-benzene-sulfonamide.

Authors:  Hakima Chicha; El Mostapha Rakib; Latifa Bouissane; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-10-12

6.  1-(4-Methyl-phenyl-sulfon-yl)-5,6-di-nitro-1H-indazole.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-12-24

7.  4-Meth-oxy-N-(1-methyl-1H-indazol-5-yl)benzene-sulfonamide.

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  7 in total

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