Xueting Yu1, Gary A Lorigan. 1. Department of Chemistry and Biochemistry, Miami University , Oxford, Ohio 45056, United States.
Abstract
Phospholamban (PLB) is a membrane protein that regulates heart muscle relaxation rates via interactions with the sarcoplasmic reticulum Ca(2+) ATPase (SERCA). When PLB is phosphorylated or Arg9Cys (R9C) is mutated, inhibition of SERCA is relieved. (13)C and (15)N solid-state NMR spectroscopy is utilized to investigate conformational changes of PLB upon phosphorylation and R9C mutation. (13)C═O NMR spectra of the cytoplasmic domain reveal two α-helical structural components with population changes upon phosphorylation and R9C mutation. The appearance of an unstructured component is observed on domain Ib. (15)N NMR spectra indicate an increase in backbone dynamics of the cytoplasmic domain. Wild-type PLB (WT-PLB), Ser16-phosphorylated PLB (P-PLB), and R9C-mutated PLB (R9C-PLB) all have a very dynamic domain Ib, and the transmembrane domain has an immobile component. (15)N NMR spectra indicate that the cytoplasmic domain of R9C-PLB adopts an orientation similar to P-PLB and shifts away from the membrane surface. Domain Ib (Leu28) of P-PLB and R9C-PLB loses the alignment. The R9C-PLB adopts a conformation similar to P-PLB with a population shift to a more extended and disordered state. The NMR data suggest the more extended and disordered forms of PLB may relate to inhibition relief.
Phospholamban (PLB) is a membrane protein that regulates heart muscle relaxation rates via interactions with the sarcoplasmic reticulum Ca(2+)ATPase (SERCA). When PLB is phosphorylated or Arg9Cys (R9C) is mutated, inhibition of SERCA is relieved. (13)C and (15)N solid-state NMR spectroscopy is utilized to investigate conformational changes of PLB upon phosphorylation and R9C mutation. (13)C═O NMR spectra of the cytoplasmic domain reveal two α-helical structural components with population changes upon phosphorylation and R9C mutation. The appearance of an unstructured component is observed on domain Ib. (15)NNMR spectra indicate an increase in backbone dynamics of the cytoplasmic domain. Wild-type PLB (WT-PLB), Ser16-phosphorylated PLB (P-PLB), and R9C-mutated PLB (R9C-PLB) all have a very dynamic domain Ib, and the transmembrane domain has an immobile component. (15)NNMR spectra indicate that the cytoplasmic domain of R9C-PLB adopts an orientation similar to P-PLB and shifts away from the membrane surface. Domain Ib (Leu28) of P-PLB and R9C-PLB loses the alignment. The R9C-PLB adopts a conformation similar to P-PLB with a population shift to a more extended and disordered state. The NMR data suggest the more extended and disordered forms of PLB may relate to inhibition relief.
Phospholamban (PLB)
is a 52 amino acid membrane protein that is
located in the sarcoplasmic reticulum (SR) membrane of heart muscle
cells.[1−3] Despite its small size, PLB plays an important role
in regulating heart muscle relaxation rate by interacting with sarcoplasmic
reticulum Ca2+ ATPase (SERCA).[1] In the absence of PLB, SERCA acts as a Ca2+ ion channel
that transports Ca2+ ions from the cytosol into the SR
and triggers the heart muscle relaxation process.[1,2] PLB
interacts with SERCA and inhibits SERCA function by decreasing SERCA-Ca2+ affinity.[1] The inhibition effect
is removed when PLB is phosphorylated at Ser16 by protein kinase A
(PKA) or when the cytoplasmicCa2+ ion concentration is
elevated.[4,5] PLB inhibition and inhibition relief effects
on SERCA regulate SERCA function, which as a result controls the heart
muscle relaxation rate.[1]PLB has
four domains: cytoplasmic domain (domain Ia; residues 1–16),
loop region (residues 17–22), domain Ib (residues 23–30),
and the transmembrane domain (residues 31–52).[6] The bellflower model has been established with the cytoplasmic
domain sticking out into the cytosol as an α-helix or as an
unstructured coil.[7,8] Recent studies have shown that
the inconsistency of the cytoplasmic domain conformation results from
dynamicchanges.[9−11] Instead of adopting a fixed conformation in the membrane,
it consists of a mixture of two or more conformation states.[9] In vivo, PLB forms a pentamer with the cytoplasmic
domain as an α-helix laying flat on the membrane surface.[12] The flexibility of the cytoplasmic domain enables
it to act as the regulatory region of PLB function via shifting its
conformation states with the interplay of SERCA, PKA, and the membrane
environment.[13−15]Domain Ib is less well studied and located
on the top of the hydrophobic
region of the membrane as an α-helix.[6,12] EPR
studies have indicated that this segment of PLB is much more dynamic
than the cytoplasmic domain.[15,16] Two conformation states
are identified in domain Ib, which are folded and unfolded.[14] Recent studies have suggested that domain Ib
is also involved in regulating PLB function.[14] The transmembrane domain has abundant leucines and isoleucines forming
a Leu-zipper and the three cysteines forming disulfide bonds to help
stabilize the PLB pentamer.[12] Mutagenesis
and protein–protein interaction studies suggest that one face
of the transmembrane domain binds to SERCA, while the other face stabilizes
the PLB pentamer form by interacting between the monomers.[2,17−19]In living cells, ∼78% of PLB are in
the pentamer form and
the rest are in the monomer form.[6] It is
the monomer form that interacts with and inhibits SERCA, while the
pentamer form acts only as an inactive storage form.[1] However, the monomer form alone cannot regulate heart muscle
relaxation.[20] When PLB is phosphorylated,
there is a slightly increase in pentameric form population.[21]PLBcan adopt four different conformational
states (T, T′,
R, and R′). The low-energy level T state has the cytoplasmic
domain forming an α-helix on top of the membrane surface and
domain Ib folded.[9] The high energy level
R state has the cytoplasmic domain unfolded and extended into the
cytosol, and domain Ib is unfolded.[9] The
two conformation states (folded and unfolded) of domain Ib are independent
of the cytoplasmic domain.[13] Equilibrium
is established between the T and R states with the T state as a dominant
population in vivo.[12] When phosphorylated,
PLB population shifts from the T state to an intermediate T′
state, which gives rise to the more disordered and extended R state.[14,21,22] The T′ state has an extended
cytoplasmic domain partially attached to the membrane surface.[14] The intermediate R′ state has a completely
unfolded cytoplasmic domain that is attached to the membrane surface.[14] The conformational states are suggested to be
well-related to the function of PLB, that is, each state or each dominant
state may correspond to a function such as inhibition.[13] PLBconformational studies are extremely important
to relate structural investigations to the functional studies.Interplay between PLB, SERCA, and the membrane controls the regulation
of PLB on SERCA.[13,23−25] However, the
mechanism of this regulation is not known. It is believed that the
membrane is not only acting as an environment to stabilize or localize
SERCA and PLB but is also involved actively in regulating function.[13,23,26]PLB mutants are divided
into two types: gain-of-function mutants
and loss-of-function mutants.[18,19,27] Gain-of-function mutants have a superinhibition effect on SERCA
when compared with wild-type PLB (WT-PLB), whereas loss-of-function
mutants have inhibitory function relief.[18,19] Mutation sites are not confined to certain domains according to
their effects, which suggest that PLB function is not controlled by
certain sites on only one domain.[18,19] Several factors
may be involved including: PLB oligomerization states, structural
conformations, and its interaction with the membrane and SERCA.This study is focused on the Arg9Cys (R9C)-mutated PLB (R9C-PLB)
loss-of-function mutant. R9C-PLB has been identified in individuals
who have heart chamber enlargement, which can lead to heart failure
in 5 to 10 years.[28] Oligomerization has
been suggested to partially contribute to R9C-PLBfunctionality loss.[29] Structural conformations between WT-PLB, Ser16-phosphorylated
PLB (P-PLB), and R9C-PLB are compared for the first time with NMR
spectroscopy.Solid-state NMR spectroscopy is a robust method
to study the structural
and dynamic properties of membrane proteins.[30−38] Because of the large size, hydrophobicity, and sensitivity to the
environment of membrane proteins, traditional structural biology methods
are not appropriate to elucidate valid structural information.[39−42] The local secondary structure can be investigated by analyzing the 13CNMR spectrum of a 13C=O group on a specific
residue.[43−49] Static15NNMR powder pattern spectra reveal information
on the backbone dynamics of a specific residue.[50−52] With mechanically
aligned glass plate samples, membrane proteins are aligned in lipid
bilayers with the bilayer normal oriented parallel to the static magnetic
field.[53−56]15N labels at specific sites yield 15Nchemical
shift resonances to resolve the structural topology.[53−55,57−60] The cytoplasmic domain, domain
Ib, and transmembrane domain are studied with solid-state NMR spectroscopy
to elucidate the secondary structure, backbone dynamics, and topology
changes of PLB upon R9C mutation and phosphorylation.
Materials and
Methods
Materials
1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine
(POPC), 1,2-dioleoyl-sn-glycero-3-phosphocholine
(DOPC), and 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine
(DOPE) were purchased from Avanti Polar Lipids (Alabaster, AL). The
phospholipids were dissolved in chloroform and stored at −20
°C before use. Trifluoroethanol (TFE) and N-[2-hydroxyethyl]piperazine-N′-2-ethane sulfonic acid (HEPES) were purchased
from Sigma-Aldrich (St. Louis, MO). Ethylenediaminetetraacetic acid
(EDTA) and sodium chloride (NaCl) were purchased from Fisher Scientific
(Pittsburgh, PA). Prephosphorylated Fmoc-serine and Fmoc amino acids
were obtained from Applied Biosystems (Carlsbad, CA). 13C=O labeled Fmoc-alanine, 13C=O labeled
Fmoc-leucine, 15N labeled Fmoc-alanine, and 15N labeled Fmoc-leucine were purchased from Isotec TM/Sigma-Aldrich
(Miamisburg, OH). All other peptide synthesis and HPLC reagents and
solvents were acquired from VWR (San Dimas, CA). NMR glass sample
cells were purchased from New Era Enterprise (Vineland, NJ). Glass
plates were purchased from Superior Marienfeld Laboratory Glassware
(Lauda-Konigshofen, Germany).
Synthesis, Purification,
and Characterization of WT-PLB and
R9C-PLB
Specific13C- or 15N-labeled
WT-PLB, P-PLB, and R9C-PLB were synthesized via Fmoc-based solid-phase
peptide synthesis on a CEM solid-phase peptide synthesizer. 13C labels were placed on Ala15, Ala24, and Leu39 residues. 15N labels were placed at positions Ala11, Ala24, Leu28, and Leu42.
To synthesize the specific labeled P-PLB, we used prephosphorylated
Fmoc-serine at Ser16. Crude peptides were obtained after cleavage
using a cleavage mixture. A General Electric (GE) AKTA purifier HPLC
was utilized to purify peptides by reverse-phase chromatography on
a C18 column. The purified peptides were lyophilized and characterized
by matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF)
mass spectrometry. The peptides were at least 95% pure.
NMR Sample
Preparation
MLVs were prepared according
to a protocol established by Rigby and coworkers.[61] Lyophilized specific labeled WT-PLB, P-PLB, and R9C-PLB
were dissolved in a minimal amount of TFE. POPC (35 mg) was mixed
with dissolved peptides (4 mol % with respect to lipid) in a 12 ×
75 mm test tube. The solvent was removed by a steady stream of N2 gas and placed in a vacuum desiccator overnight. The lipid
peptide mixture was rehydrated with 95 μL of HEPES buffer (5
mM EDTA, 20 mM NaCl, and 30 mM HEPES at pH 7.0). Vesicles were formed
in a warm water bath at 45 °C for ∼30 min using a vortexer
and bath sonication. The sample was transferred into a 4 mm NMR rotor
for solid-state NMR experiments.Mechanically aligned glass
plate samples were prepared as previously described.[53−55,57,58] Lyophilized specifically labeled WT-PLB, P-PLB, and R9C-PLB were
dissolved in a minimal amount of TFE. Next, PLB (1 mol % with respect
to the lipid) was mixed with 60 mg of DOPC/DOPE (molar ratio 4:1).
Then, the organic solvent was removed by a steady stream of N2 gas. A thin layer of the mixture was applied to 35–40
glass plates and dried in a vacuum desiccator overnight. 2H-depleted water (4 μL) was added to the sample on each glass
plate, and the glass plates were stacked on top of each other. The
sample was rehydrated in a hydration chamber with saturated ammonium
phosphate (humidity ∼93%) for 24 h at 42 °C. The sample
was then transferred to a rectangular glass sample cell and sealed
for NMR measurements.
Solid-State NMR Spectroscopy
All
NMR spectra were acquired
using a 500 MHz WB Bruker Avance solid-state NMR spectrometer. 13C and 15NNMR experiments using MLV samples were
performed with a Bruker 4 mm triple resonance CPMAS probe. 13CCPMAS experiments were conducted with a spinning speed at 5 kHz
at the magic angle. 1H 90° pulse length was set to
4.5 μs; contact time 3 ms, recycle delay 4 s. Eight k scans
were averaged, and 70 Hz line broadening was used. TMS was used as
the external reference for the 13CNMR spectra. All 13CNMR spectra were measured at −25 °C. Static15NNMR experiments using MLV samples were performed using
a ramp-CP pulse sequence with 1H decoupling. 1H 90° pulse length was set to 4.7 μs; contact time was
1.5 ms, and recycle delay was 4 s. 120 k scans were averaged, and
300 Hz line broadening was used. Simulations of both the 13C and 15NNMR spectra were performed using DMFIT software.[62]Static15NNMR experiments
using mechanically aligned glass plate samples were performed with
a flat coil 1H-X Low-E NMR probe.[55] The alignment of the samples was checked by observing the static31P solid-state NMR spectra from the membrane phospholipids.
A ramp-CP pulse sequence with 1H decoupling was used to
acquire the 15NNMR spectra. 1H 90° pulse
length was set to 5 μs. The contact time was 1.5 ms, and the
recycle delay was 4 s. 120 k scans were averaged, and 300 Hz line
broadening was used. 15NH4Cl was used as the
external reference for the 15NNMR spectra. All 15NNMR spectra were acquired at 25 °C.
Results and Discussion
R9C is a loss-of-function mutation of PLB; therefore, R9C-PLBcannot
inhibit SERCA as efficiently as WT-PLB.[28,63] However, not
all PLB mutants abolish its inhibition function. Some mutants increase
the inhibition effect and are called superinhibition.[52,64] It is not clear why different mutants have different effects. A
few properties of these mutants can be investigated to relate to their
function variation. PLB affinity to SERCA, interactions with the lipid
bilayer, oligomerization states, and conformations are the major factors.
Previous studies have indicated that WT-PLB, P-PLB, and a few type
of PLB mutants have similar apparent affinity to SERCA.[19,65,66] Thus, PLB affinity to SERCA is
distinct from PLB inhibitory function regulation. WT-PLB interacts
actively with the lipid bilayers by increasing the dynamics of both
the membrane surface and hydrophobic region.[49] Both P-PLB and R9C-PLB have significantly less interaction with
the membrane.[26,49] Therefore, interaction with lipids
may be involved in regulating PLB function. WT-PLB is dominated by
the pentamer form.[12] P-PLB and R9C-PLB
as well as a few loss-of-function mutants have slightly increased
pentamer form population, while some of the gain-of-function mutants
have a dominant monomer form.[18,19,29] Oligomerization may partially contribute to PLB mutant function
regulation. Structural conformations of WT-PLB, P-PLB, and R9C-PLB
are compared in this project.Membrane protein topology, dynamics,
and secondary structure are
important aspects to investigate in structure biology.[67−70] For the membrane protein PLB studies, these investigations can give
insights into its structure–function relationship. Veglia and
coworkers have studied the conformational states of PLB and the function
of corresponding conformations.[13] A linear
correlation is established.[13] It is suggested
that the ordered folded T state relates to the inhibition function
of PLB, while the disordered and extended T′ state and R state
relate to the inhibition relief.[13] This
helps to explain the loss of inhibition upon phosphorylation on PLB.
Phosphorylation shifts PLBconformation states from the dominant T
state to the T′ state that are readily exchangeable with the
R state.[13] It is very likely that the T′
state with the cytoplasmic domain partially unfolded and dissociated
from the membrane surface relieves inhibition by PLB. The R9C-PLB
is a loss-of-function mutant that also relieves inhibition of SERCA
similar to P-PLB.[28] Conformation state
shifting from the T state to the T′ state or the R state upon
R9C mutation would be coupled to functionality loss and make the R9C-PLBconformation studies extremely significant.
Secondary Structure
13CCPMAS solid-state
NMR spectroscopy provides secondary structure information by studying
the 13C=O signal of a specific residue on a membrane
protein.[45]13CCPMAS NMR spectroscopy
of membrane proteins yields well-resolved 13C=O
NMR peaks in the region of 170 to 180 ppm.[71] A 13CNMR signal with a chemical shift of ∼176
ppm corresponds to an α-helix for alanine and leucine residues,
while a peak at ∼173 ppm corresponds to an unstructured coil
for an alanine residue.[43−46,49]Ala15 is located
toward the end of the cytoplasmic domain and is the neighbor of a
phosphorylation site (Ser16), thus, it would be sensitive to changes
induced by phosphorylation. Secondary structure of the cytoplasmic
domain of WT-PLB, P-PLB, and R9C-PLB was examined by 13CCPMAS NMR spectroscopy with a 13C=O label on
Ala15. The corresponding 13C solid-state NMR spectra are
shown in Figure 1. WT-PLB (Figure 1A) has two peaks at 176.5 and 175.4 ppm, indicating
that the cytoplasmic domain of WT-PLBconsists of two α-helical
structural conformations. Both P-PLB and R9C-PLB (Figure 1B,C) have peaks centered at 176.3 and 174.9 ppm,
which are very close to the WT-PLB signals, but the intensity of the
174.9 ppm signal is larger than the peak at 176.3 ppm. This suggests
that phosphorylation and R9C mutation increases the population of
one of the two α-helical components. Either phosphorylation
or R9C mutation of PLB does not induce significant secondary structure
changes to the cytoplasmic domain but only involves a population shift.
Figure 1
13C CPMAS solid-state NMR spectra of POPC MLVs acquired
at −25 °C with 13C=O labeled on the
Ala15 residue in the cytoplasmic domain of WT-PLB (A), P-PLB (B),
and R9C-PLB(C).
13CCPMAS solid-state NMR spectra of POPC MLVs acquired
at −25 °C with 13C=O labeled on the
Ala15 residue in the cytoplasmic domain of WT-PLB (A), P-PLB (B),
and R9C-PLB(C).Domain Ib was investigated
with a 13C=O label
at Ala24, which is located near the beginning of domain Ib. Figure 2 shows 13CNMR spectra of the domain
Ib of WT-PLB, P-PLB, and R9C-PLB. The WT-PLB sample (Figure 2A) has a major peak at 175.8 ppm with a broad shoulder,
while P-PLB and R9C-PLB (Figure 2B,C) have
two peaks with one centered at 173.2 ppm with a larger intensity and
the other at 175.8 ppm. Domain Ib of WT-PLB forms an α-helix.
Interestingly, upon phosphorylation or R9C mutation, a significant
population of unstructured coil appears. The data indicate an unfolding
or partially unfolding process in domain Ib upon phosphorylation or
R9C mutation.
Figure 2
13C CPMAS solid-state NMR spectra of POPC MLVs
acquired
at −25 °C with 13C=O labeled on the
Ala24 residue in domain Ib of WT-PLB (A), P-PLB (B), and R9C-PLB (C).
13CCPMAS solid-state NMR spectra of POPC MLVs
acquired
at −25 °C with 13C=O labeled on the
Ala24 residue in domain Ib of WT-PLB (A), P-PLB (B), and R9C-PLB (C).The transmembrane domain was probed
with a 13C=O
label placed at Leu39. The corresponding 13CNMR spectra
are shown in Figure 3. WT-PLB and R9C-PLB yield
a single well-resolved peak at 176.3 and 176.7 ppm corresponding to
a single α-helical component. The data suggest that the transmembrane
domain secondary structure is not affected by R9C mutation. Previous
studies on P-PLB also indicate an undisturbed transmembrane domain
upon phosphorylation.[9,13,14]
Figure 3
13C CPMAS solid-state NMR spectra of POPC MLVs acquired
at −25 °C with 13C=O labeled on the
Leu39 residue in the transmembrane domain of WT-PLB (A) and R9C-PLB
(B).
13CCPMAS solid-state NMR spectra of POPC MLVs acquired
at −25 °C with 13C=O labeled on the
Leu39 residue in the transmembrane domain of WT-PLB (A) and R9C-PLB
(B).
Backbone Dynamics
Backbone dynamics of PLB were investigated
by 15N solid-state NMR spectroscopy with 15N
labels placed on specific residues. 15N-labeled amide proteins
in MLVs adopt random orientations, revealing a 15N powder
pattern line shape.[72] The chemical shift
anisotropy (CSA) width of the powder pattern spectra reflects the
backbone dynamics of the specific labeled residue.[50,59]Figure 4 compares the 15NNMR spectra of WT-PLB, P-PLB, and R9C-PLB with the 15N label on the Ala11 residue of the cytoplasmic domain. 15NNMR spectra of all three samples consisted of a broad powder pattern
line shape that is typical for unoriented solid-state 15NNMR membrane protein samples and an isotropiccomponent at 121–122
ppm. The CSA widths of the broad components of WT-PLB, P-PLB, and
R9C-PLB are 171, 168, and 163 ppm. The 15NNMR data indicate
that the cytoplasmic domain is a mixture of a dominant ordered component
and a small mobile population. The data are consistent with WT-PLBcytoplasmic domain studies that have an equilibrium between the T
and R states, in which the T state is immobile and more populated
and the R state is more dynamic.[12] Upon
phosphorylation and R9C mutation, the intensity of the isotropic signal
increases and suggests a population shift from the T state to the
disordered T′ or R state. Notably, the CSA width of the immobile
component of R9C-PLB is reduced by 8 ppm when compared with WT-PLB,
while P-PLB induces a 3 ppm CSA width reduction. The 15NNMR data indicate a slightly increased motion of the immobile component
of residue Ala11 in the R9C-PLBcytoplasmic domain.
Figure 4
15N solid-state
NMR powder pattern spectra of POPC MLVs
acquired at 25 °C with 15N labeled on the Ala11 residue
in the cytoplasmic domain of WT-PLB (A), P-PLB (B) and R9C-PLB (C).
15N solid-state
NMR powder pattern spectra of POPC MLVs
acquired at 25 °C with 15N labeled on the Ala11 residue
in the cytoplasmic domain of WT-PLB (A), P-PLB (B) and R9C-PLB (C).Backbone dynamics were investigated
in domain Ib with an 15N label on the Ala24 residue. The 15NNMR spectra of all
the WT-PLB, P-PLB and R9C-PLB are shown in Figure 5. The 15NNMR spectrum of WT-PLB labeled on Ala24
of domain Ib yields a peak with an undistinguishable isotropiccomponent
and a broad powder pattern component. Unlike the two distinct components
observed in the cytoplasmic domain, the undistinguishable static15NNMR peak of domain Ib could rise from the fast exchange
between a folded and unfolded state in microseconds.[9] The exchange between the states in the cytoplasmic domain
is on the 15NNMR spectroscopy time scale (milliseconds),[9] and thus both states are observed. The data are
consistent with the EPR studies that show two states of domain Ib
due to the fast EPR time scale.[13] Upon
phosphorylation or R9C mutation, there is no significant change in
the 15NNMR spectra of domain Ib, indicating the fast exchange
between folded and unfolded states.
Figure 5
15N solid-state NMR powder
pattern spectra of POPC MLVs
acquired at 25 °C with 15N labeled on the Ala24 residue
in the domain Ib of WT-PLB (A), P-PLB (B), and R9C-PLB (C).
15N solid-state NMR powder
pattern spectra of POPC MLVs
acquired at 25 °C with 15N labeled on the Ala24 residue
in the domain Ib of WT-PLB (A), P-PLB (B), and R9C-PLB (C).For comparison, Figure 6 shows the 15NNMR spectra of WT-PLB
and R9C-PLB with the 15N label placed on Leu42 of the transmembrane
domain. Characteristic
powder pattern line shape spectra with similar CSA width (173 ppm)
are observed for both WT-PLB and R9C-PLB. The broad single component 15N spectrum indicates that the transmembrane domain of both
forms of PLB is immobile in the membrane. The results are similar
to that of the P-PLB form according to previous studies.[9,13,14]
Figure 6
15N solid-state NMR powder
pattern spectra of POPC MLVs
acquired at 25 °C with 15N labeled on the Leu42 residue
in the cytoplasmic domain of WT-PLB (A) and R9C-PLB (B).
15N solid-state NMR powder
pattern spectra of POPC MLVs
acquired at 25 °C with 15N labeled on the Leu42 residue
in the cytoplasmic domain of WT-PLB (A) and R9C-PLB (B).
Structural Topology
The structural
topology of PLB
with respect to the membrane was studied using 15N solid-state
NMR spectroscopy of PLB incorporated into mechanically aligned glass
plate samples. In these oriented samples, the direction of the bilayer
normal is aligned parallel to the static magnetic field.[54] An 15NNMR resonant peak near σ⊥ indicates that the labeled residue is located perpendicular
with the bilayer normal, while a 15NNMR peak near σ// indicates the labeled residue is located parallel with the
bilayer normal.[53−55]Figure 7 compares the 15NNMR spectra of WT-PLB, P-PLB, and R9C-PLB with the 15N label on Ala11 of the cytoplasmic domain. WT-PLB (Figure 7A) has a peak at 71 ppm, which is very close to
σ⊥, indicating that WT-PLBcytoplasmic domain
lies nearly flat on the surface of the lipid bilayer, which is consistent
with previous WT-PLB studies.[12,57] P-PLB and R9C-PLB (Figure 7B,C) reveal peaks at 92 and 86 ppm. The shift of
the 15NNMR peak indicates a dynamic shift due to backbone
motion, a change in cytoplasmic domain topology, or a secondary structure
change.
Figure 7
15N CP solid-state NMR spectra of mechanically aligned
DOPC/DOPE (4:1 ratio) lipid bilayers acquired at 25 °C with 15N labeled on the Ala11 residue in the cytoplasmic domain
of WT-PLB (A), P-PLB (B), and R9C-PLB (C).
15NCP solid-state NMR spectra of mechanically aligned
DOPC/DOPE (4:1 ratio) lipid bilayers acquired at 25 °C with 15N labeled on the Ala11 residue in the cytoplasmic domain
of WT-PLB (A), P-PLB (B), and R9C-PLB (C).If the 15 ppm downfield shift of R9C-PLB is only due to the
backbone
dynamic increase, a similar CSA width reduction can be expected when
comparing the static15NNMR spectra of 15N-Ala11
WT-PLB with those of R9C-PLB in MLVs. MLVs are more hydrated than
glass plate samples, so a CSA width reduction of ∼15 ppm or
larger can be expected. However, R9C-PLB induced an 8 ppm decrease
in CSA width when compared with WT-PLB. So, beside the backbone dynamic
increase, topology and/or secondary structure change also contributes
to the downfield shift of R9C-PLB. No significant secondary structure
change is observed at residue Ala15 in the cytoplasmic domain when
R9C is mutated. More likely, Ala11 topology changes by shifting away
from the membrane surface, as observed in previous P-PLB studies.[58] The hypothesis is compatible with the 31PNMR data revealing a significantly less disturbance of R9C-PLB
on the lipid bilayer surface when compared with WT-PLB.[26] NMR data further confirm the shift of population
from a membrane-attached T state toward partially membrane detached
and more disordered T′ state or R state upon phosphorylation
or R9C mutation.Aligned 15NNMR spectra of WT-PLB,
P-PLB, and R9C-PLB
with 15N-label on the Leu28 residue of the domain Ib are
shown in Figure 8. Ala24 is not used here because
WT-PLB shows no alignment (data not shown). It is not surprising because
Ala24 is at the beginning of domain Ib, which is close to the loop
region and the water–lipid interface. It is very possible that
it does not have a fixed orientation in the lipid bilayer. A 15NNMR resonant peak at 210 ppm is observed for the WT-PLB
(Figure 8A). It is near σ// and the 15NNMR peak of WT-PLB with a 15N
label on the transmembrane domain.[57] Thus, domain Ib of the WT-PLB aligns nearly parallel with the membrane
bilayer normal and the transmembrane domain. Interestingly, because
all samples were well-aligned with the bilayer normal parallel to
the static magnetic field according to the 31PNMR data,
upon phosphorylation or R9C mutation, the alignment of domain Ib is
lost with the appearance of a broad powder pattern line shape in addition
to a 208 ppm peak (Figure 8B,C). The spectra
indicate a mixture of an unoriented component and an oriented component
parallel to the bilayer normal.
Figure 8
15N CP solid-state NMR spectra
of mechanically aligned
DOPC/DOPE (4:1 ratio) lipid bilayers acquired at 25 °C with 15N labeled on the Leu28 residue in the domain Ib of WT-PLB
(A), P-PLB (B), and R9C-PLB (C).
15NCP solid-state NMR spectra
of mechanically aligned
DOPC/DOPE (4:1 ratio) lipid bilayers acquired at 25 °C with 15N labeled on the Leu28 residue in the domain Ib of WT-PLB
(A), P-PLB (B), and R9C-PLB (C).The unoriented broad component may be due to backbone dynamicchanges,
topology, and/or secondary structure changes. If it is not due to
the secondary structure change, Leu28 should adopt random orientations
as an α-helix in the lipid bilayer. A dramatic disturbance in
the lipid acyl chain near the membrane surface is expected. However, 2HNMR spectra investigating lipid acyl chain dynamics do not
show any effect upon R9C-PLB or P-PLB addition.[26] More likely, the secondary structure change occurs upon
R9C mutation or phosphorylation. Unwinding is observed at Ala24 in
domain Ib, suggesting a population shift from the dominant folded
state toward an unfolded state.The transmembrane domain topology
was investigated with the 15N label on the Leu42 residue
(Figure 9). Both WT-PLB and R9C-PLB (Figure 9A,B) show
a peak at 208 and 211 ppm, which is near σ//. The 15NNMR spectra indicate that the transmembrane domain of both
types of PLB aligns nearly parallel with the bilayer normal, which
is also similar to P-PLB according to previous studies.[9,13,14]
Figure 9
15N CP solid-state NMR spectra
of mechanically aligned
DOPC/DOPE (4:1 ratio) lipid bilayers acquired at 25 °C with 15N labeled on the Leu42 residue in the transmembrane domain
of WT-PLB (A) and R9C-PLB (B).
15NCP solid-state NMR spectra
of mechanically aligned
DOPC/DOPE (4:1 ratio) lipid bilayers acquired at 25 °C with 15N labeled on the Leu42 residue in the transmembrane domain
of WT-PLB (A) and R9C-PLB (B).Taking all of the data together, when R9C is mutated, the
PLBcytoplasmic
domain undergoes a possible dissociation process from the membrane
surface with increased population of fast backbone motion like the
P-PLB. Domain Ib experiences a population shift from a folded to an
unfolded state. The transmembrane domain is mostly unaffected. If
the T′ state is identified as dominated in P-PLB, a more disorderedcytoplasmic domain dissociated from the membrane matches perfectly
with the conformation that is observed here for both P-PLB and R9C-PLB.
The R state has a completely unfolded cytoplasmic domain and domain
Ib. Thus, when phosphorylated or R9C-mutated, PLBconformation probably
shifts from a dominant T state to T′ state or even R state.
This population shift may induce PLB inhibition function loss. Studies
of PLBN27A superinhibition mutant concluded that there is no significant
difference between the backbone dynamics of the WT-PLB and N27A-PLB
for both the cytoplasmic domain and transmembrane domain.[52] The data suggest that N27A-PLB adopts a dominant
ordered T state, similar to the WT-PLB, and that this conformation
retains or even elevates the inhibition function. Both phosphorylation
and R9C mutation appear to shift PLBconformation from the T state
to the T′ and/or R state. This more disordered and extended
conformation may facilitate the PLB inhibition function relief. The
data indicate the correlation between conformational state and function.The mechanism of structural conformation change by the R9C mutation
is unknown. WT-PLBcytoplasmic domain absorbed on the membrane surface
could be partially stabilized by the three positively charged Arg
residues electrostatically interacting with the negatively charged
bilayer surface. When Arg9 is mutated into a neutral Cys, the electrostatic
interaction would be weakened, which may initiate the dissociation
of the cytoplasmic domain from the membrane surface.The studies
on the interplay between SERCA, PLB, and the membrane
indicate that both the transmembrane domain and domain Ib interact
with SERCA and that the membrane can bind to SERCA and activate it.[13,23,25] Loose binding of the transmembrane
domain to SERCA is not crucial for inhibition but only to recruit
SERCA.[2,23] Thus, it is not surprising to observe the
undisturbed transmembrane domain by either phosphorylation or R9C
mutation in this study. It is more likely that domain Ib carries out
inhibition. Recent studies show that the interaction sites of SERCA
with PLB and the membrane may overlap.[2,13,23] It is possible that the membrane and PLB domain Ib
compete for binding to SERCA, with the PLB inhibiting SERCA while
the membrane activates SERCA.[2,23] When phosphorylated
or R9C-mutated, unwinding of domain Ib may expose the interaction
site with SERCA. The dissociation of PLBcytoplasmic domain from the
membrane surface may facilitate the lipid to bind to and activate
SERCA, which could induce the inhibition relief process. The mechanism
of SERCA inhibition relief by P-PLB and R9C-PLB and its mediation
by the membrane requires further studies.
Conclusions
On
the basis of the solid-state NMR studies in this paper, the
R9C mutation of PLB induces the cytoplasmic domain to undergo a change
in the population of the α-helical component and partially dissociation
from the membrane surface with increased backbone dynamics. Similar
effects are noted for the phosphorylated PLB. Domain Ib of the WT-PLB
forms a mobile α-helical component. When phosphorylated or R9C-mutated,
the population shifts from a folded to an unfolded state in domain
Ib are observed. The transmembrane domain is unaffected. The data
indicate that phosphorylation or R9C mutation induce a population
shift of PLBconformation from a dominant T state to a more extended
and disorderedconformation, which may correspond to a mixture of
T′ state and R state. This conformation change correlates to
the T′ state and R state with the PLB inhibition function loss.
Authors: Erik K Larsen; Daniel K Weber; Songlin Wang; Tata Gopinath; Daniel J Blackwell; Michael P Dalton; Seth L Robia; Jiali Gao; Gianluigi Veglia Journal: Biochim Biophys Acta Biomembr Date: 2019-08-07 Impact factor: 3.747
Authors: Lishan Liu; Daniel J Mayo; Indra D Sahu; Andy Zhou; Rongfu Zhang; Robert M McCarrick; Gary A Lorigan Journal: Methods Enzymol Date: 2015-08-01 Impact factor: 1.600