Literature DB >> 24478491

Field evaluation of dried blood spots for routine HIV-1 viral load and drug resistance monitoring in patients receiving antiretroviral therapy in Africa and Asia.

Marjorie Monleau1, Avelin F Aghokeng, Sabrina Eymard-Duvernay, Anoumou Dagnra, Dramane Kania, Nicole Ngo-Giang-Huong, Coumba Touré-Kane, Lien X T Truong, Marie-Laure Chaix, Eric Delaporte, Ahidjo Ayouba, Martine Peeters.   

Abstract

Dried blood spots (DBS) can be used in developing countries to alleviate the logistic constraints of using blood plasma specimens for viral load (VL) and HIV drug resistance (HIVDR) testing, but they should be assessed under field conditions. Between 2009 and 2011, we collected paired plasma-DBS samples from treatment-experienced HIV-1-infected adults in Burkina Faso, Cameroon, Senegal, Togo, Thailand, and Vietnam. The DBS were stored at an ambient temperature for 2 to 4 weeks and subsequently at -20°C before testing. VL testing was performed on the plasma samples and DBS using locally available methods: the Abbott m2000rt HIV-1 test, generic G2 real-time PCR, or the NucliSENS EasyQ version 1.2 test. In the case of virological failure (VF), i.e., a plasma VL of ≥1,000 copies/ml, HIVDR genotyping was performed on paired plasma-DBS samples. Overall, we compared 382 plasma-DBS sample pairs for DBS VL testing accuracy. The sensitivities of the different assays in different laboratories for detecting VF using DBS varied from 75% to 100% for the m2000rt test in labs B, C, and D, 91% to 93% for generic G2 real-time PCR in labs A and F, and 85% for the NucliSENS test in lab E. The specificities varied from 82% to 97% for the m2000rt and NucliSENS tests and reached only 60% for the generic G2 test. The NucliSENS test showed good agreement between plasma and DBS VL but underestimated the DBS VL. The lowest agreement was observed for the generic G2 test. Genotyping was successful for 96/124 (77%) DBS tested, and 75/96 (78%) plasma-DBS pairs had identical HIVDR mutations. Significant discrepancies in resistance interpretations were observed in 9 cases, 6 of which were from the same laboratory. DBS can be successfully used as an alternative to blood plasma samples for routine VL and HIVDR monitoring in African and Asian settings. However, the selection of an adequate VL measurement method and the definition of the VF threshold should be considered, and laboratory performance should be monitored.

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Year:  2013        PMID: 24478491      PMCID: PMC3911301          DOI: 10.1128/JCM.02860-13

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  26 in total

1.  Impact of HIV-1 genetic diversity on plasma HIV-1 RNA Quantification: usefulness of the Agence Nationale de Recherches sur le SIDA second-generation long terminal repeat-based real-time reverse transcriptase polymerase chain reaction test.

Authors:  François Rouet; Marie-Laure Chaix; Eric Nerrienet; Nicole Ngo-Giang-Huong; Jean-Christophe Plantier; Marianne Burgard; Martine Peeters; Florence Damond; Didier Koumavi Ekouevi; Philippe Msellati; Laurent Ferradini; Sandra Rukobo; Valérie Maréchal; Nilda Schvachsa; Lahcen Wakrim; Christian Rafalimanana; Benjamin Rakotoambinina; Jean-Paul Viard; Jean-Marie Seigneurin; Christine Rouzioux
Journal:  J Acquir Immune Defic Syndr       Date:  2007-08-01       Impact factor: 3.731

2.  Quantitation of HIV-1 RNA in dried blood spots by the real-time NucliSENS EasyQ HIV-1 assay in Senegal.

Authors:  Coumba Toure Kane; Halimatou Diop Ndiaye; Sada Diallo; Ibrahima Ndiaye; Abdoulaye Sidibé Wade; Papa Alassane Diaw; Aïssatou Gaye-Diallo; Souleymane Mboup
Journal:  J Virol Methods       Date:  2008-02-01       Impact factor: 2.014

3.  Measuring human immunodeficiency virus type 1 RNA loads in dried blood spot specimens using NucliSENS EasyQ HIV-1 v2.0.

Authors:  Peter van Deursen; Tom Oosterlaken; Patrice Andre; André Verhoeven; Lieke Bertens; Mary Anne Trabaud; Veronique Ligeon; Jacques de Jong
Journal:  J Clin Virol       Date:  2010-02       Impact factor: 3.168

4.  Comparison of the Generic HIV Viral Load assay with the Amplicor HIV-1 monitor v1.5 and Nuclisens HIV-1 EasyQ v1.2 techniques for plasma HIV-1 RNA quantitation of non-B subtypes: the Kesho Bora preparatory study.

Authors:  François Rouet; Vincent Foulongne; Johannes Viljoen; Kim Steegen; Pierre Becquart; Diane Valéa; Sivapragashini Danaviah; Michel Segondy; Chris Verhofstede; Philippe Van de Perre
Journal:  J Virol Methods       Date:  2009-10-27       Impact factor: 2.014

5.  Measure of viral load by using the Abbott Real-Time HIV-1 assay on dried blood and plasma spot specimens collected in 2 rural dispensaries in Cameroon.

Authors:  André Dieudonné Mbida; Samuel Sosso; Pierre Flori; Henia Saoudin; Philip Lawrence; Marcel Monny-Lobé; Yves Oyono; Edward Ndzi; Giulia Cappelli; Frédéric Lucht; Bruno Pozzetto; Odile Ouwe Missi Oukem-Boyer; Thomas Bourlet
Journal:  J Acquir Immune Defic Syndr       Date:  2009-09-01       Impact factor: 3.731

6.  Evaluation of the Abbott Real-Time HIV-1 quantitative assay with dried blood spot specimens.

Authors:  A Marconi; M Balestrieri; G Comastri; F R Pulvirenti; W Gennari; S Tagliazucchi; M Pecorari; V Borghi; D Marri; M Zazzi
Journal:  Clin Microbiol Infect       Date:  2009-01       Impact factor: 8.067

7.  Performance of the Celera Diagnostics ViroSeq HIV-1 Genotyping System for sequence-based analysis of diverse human immunodeficiency virus type 1 strains.

Authors:  Susan H Eshleman; John Hackett; Priscilla Swanson; Shawn P Cunningham; Birgit Drews; Catherine Brennan; Sushil G Devare; Léopold Zekeng; Lazare Kaptué; Natalia Marlowe
Journal:  J Clin Microbiol       Date:  2004-06       Impact factor: 5.948

8.  Whole blood versus plasma spots for measurement of HIV-1 viral load in HIV-infected African patients.

Authors:  Peter Mwaba; Sharon Cassol; Andrew Nunn; Rick Pilon; Chifumbe Chintu; Michelle Janes; Alimuddin Zumla
Journal:  Lancet       Date:  2003-12-20       Impact factor: 79.321

9.  Correlation between human immunodeficiency virus type 1 (HIV-1) RNA measurements obtained with dried blood spots and those obtained with plasma by use of Nuclisens EasyQ HIV-1 and Abbott RealTime HIV load tests.

Authors:  Carolina Garrido; Natalia Zahonero; Angélica Corral; Miguel Arredondo; Vincent Soriano; Carmen de Mendoza
Journal:  J Clin Microbiol       Date:  2009-02-04       Impact factor: 5.948

10.  Evaluation of different RNA extraction methods and storage conditions of dried plasma or blood spots for human immunodeficiency virus type 1 RNA quantification and PCR amplification for drug resistance testing.

Authors:  Marjorie Monleau; Céline Montavon; Christian Laurent; Michel Segondy; Brigitte Montes; Eric Delaporte; François Boillot; Martine Peeters
Journal:  J Clin Microbiol       Date:  2009-02-04       Impact factor: 5.948

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  37 in total

1.  HemaSpot, a Novel Blood Storage Device for HIV-1 Drug Resistance Testing.

Authors:  K Brooks; A DeLong; M Balamane; L Schreier; M Orido; M Chepkenja; E Kemboi; M D'Antuono; P A Chan; W Emonyi; L Diero; M Coetzer; R Kantor
Journal:  J Clin Microbiol       Date:  2015-11-11       Impact factor: 5.948

2.  Use of reverse transcription-PCR-based assays for quantification of HIV-1 in dried blood spots requires specific HIV-1 RNA isolation for monitoring of antiretroviral treatment efficiency.

Authors:  François Rouet; Dramane Kania; Edouard Tuaillon; Almoustapha Maiga; Janin Nouhin; Christine Rouzioux; Diane Descamps; Jean-Christophe Plantier
Journal:  J Clin Microbiol       Date:  2014-07       Impact factor: 5.948

3.  Estimation of HIV-1 DNA Level Interfering with Reliability of HIV-1 RNA Quantification Performed on Dried Blood Spots Collected from Successfully Treated Patients.

Authors:  Sylvie Zida; Edouard Tuaillon; Makoura Barro; Arnaud Kwimatouo Lekpa Franchard; Thérèse Kagoné; Boubacar Nacro; Abdoul Salam Ouedraogo; Karine Bolloré; Armen Sanosyan; Jean-Christophe Plantier; Nicolas Meda; Lassana Sangaré; Christine Rouzioux; François Rouet; Dramane Kania
Journal:  J Clin Microbiol       Date:  2016-03-23       Impact factor: 5.948

4.  Field evaluation of an open and polyvalent universal HIV-1/SIVcpz/SIVgor quantitative RT-PCR assay for HIV-1 viral load monitoring in comparison to Abbott RealTime HIV-1 in Cameroon.

Authors:  Emilande Guichet; Avelin Aghokeng; Sabrina Eymard-Duvernay; Nicole Vidal; Ahidjo Ayouba; Eitel Mpoudi Ngole; Eric Delaporte; Laura Ciaffi; Martine Peeters
Journal:  J Virol Methods       Date:  2016-09-05       Impact factor: 2.014

5.  Development of a Sensitive and Specific Serological Assay Based on Luminex Technology for Detection of Antibodies to Zaire Ebola Virus.

Authors:  Ahidjo Ayouba; Abdoulaye Touré; Christelle Butel; Alpha Kabinet Keita; Florian Binetruy; Mamadou S Sow; Vincent Foulongne; Eric Delaporte; Martine Peeters
Journal:  J Clin Microbiol       Date:  2016-12-28       Impact factor: 5.948

6.  HIV Resistance and Prevention of Mother-to-Child Transmission Regimen in HIV-Infected Infants in Northern Tanzania.

Authors:  Dorothy E Dow; Werner Schimana; Balthazar M Nyombi; Blandina T Mmbaga; Aisa M Shayo; John A Bartlett; Charles G Massambu; Emmanuel G Kifaro; Elizabeth L Turner; Todd DeMarco; Fangping Cai; Coleen K Cunningham; Ann M Buchanan
Journal:  AIDS Res Hum Retroviruses       Date:  2017-10-05       Impact factor: 2.205

7.  The use of dried blood spot specimens for HIV-1 drug resistance genotyping in young children initiating antiretroviral therapy.

Authors:  Anna T Salimo; Johanna Ledwaba; Ashraf Coovadia; Elaine J Abrams; Karl-Günter Technau; Louise Kuhn; Lynn Morris; Gillian M Hunt
Journal:  J Virol Methods       Date:  2015-07-17       Impact factor: 2.014

8.  HIV-2 Drug Resistance Genotyping from Dried Blood Spots.

Authors:  Dana N Raugi; Robert S Nixon; Sally Leong; Khadim Faye; Jean Phillipe Diatta; Fatima Sall; Robert A Smith; ElHadji Ibrahima Sall; Jean Jacques Malomar; Moussa Seydi; Geoffrey S Gottlieb
Journal:  J Clin Microbiol       Date:  2020-12-17       Impact factor: 5.948

9.  Stability of Human Immunodeficiency Virus Serological Markers in Samples Collected as HemaSpot and Whatman 903 Dried Blood Spots.

Authors:  Mark M Manak; Holly R Hack; Ashley L Shutt; Brook A Danboise; Linda L Jagodzinski; Sheila A Peel
Journal:  J Clin Microbiol       Date:  2018-09-25       Impact factor: 5.948

10.  Alternative Sample Types for HIV-1 Antiretroviral Drug Resistance Testing.

Authors:  Dolly Singh; Adit Dhummakupt; Lilly Siems; Deborah Persaud
Journal:  J Infect Dis       Date:  2017-12-01       Impact factor: 5.226

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