Literature DB >> 26192603

The use of dried blood spot specimens for HIV-1 drug resistance genotyping in young children initiating antiretroviral therapy.

Anna T Salimo1, Johanna Ledwaba2, Ashraf Coovadia3, Elaine J Abrams4, Karl-Günter Technau5, Louise Kuhn6, Lynn Morris7, Gillian M Hunt8.   

Abstract

Paired plasma and dried blood spots (DBS) from 232 South African HIV-infected children initiating antiretroviral therapy (ART) were genotyped for drug resistance mutations, most of who had prior exposure to ART for prevention-of-mother-to-child-transmission. Non-nucleoside reverse transcriptase inhibitor mutations were most commonly detected in both specimen types, particularly Y181C/I and K103N/S. Resistance interpretation concordance was achieved in 97% of pairs with seven children having mutations detected in DBS only. These results validate the preferential use of DBS specimens for HIVDR genotyping in this patient group.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Children; Dried blood spots; HIV drug resistance genotyping

Mesh:

Year:  2015        PMID: 26192603      PMCID: PMC4561412          DOI: 10.1016/j.jviromet.2015.07.005

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  13 in total

1.  HIV-1 drug resistance at antiretroviral treatment initiation in children previously exposed to single-dose nevirapine.

Authors:  Gillian M Hunt; Ashraf Coovadia; Elaine J Abrams; Gayle Sherman; Tammy Meyers; Lynn Morris; Louise Kuhn
Journal:  AIDS       Date:  2011-07-31       Impact factor: 4.177

2.  Automating HIV drug resistance genotyping with RECall, a freely accessible sequence analysis tool.

Authors:  Conan K Woods; Chanson J Brumme; Tommy F Liu; Celia K S Chui; Anna L Chu; Brian Wynhoven; Tom A Hall; Christina Trevino; Robert W Shafer; P Richard Harrigan
Journal:  J Clin Microbiol       Date:  2012-03-07       Impact factor: 5.948

3.  Minority HIV mutation detection in dried blood spots indicates high specimen integrity and reveals hidden archived drug resistance.

Authors:  Xierong Wei; Ae S Youngpairoj; Carolina Garrido; Natalia Zahonero; Angelica Corral; Carmen de Mendoza; Walid Heneine; Jeffrey A Johnson; J Gerardo Garcia-Lerma
Journal:  J Clin Virol       Date:  2010-12-03       Impact factor: 3.168

Review 4.  Dried blood spots for HIV-1 drug resistance and viral load testing: A review of current knowledge and WHO efforts for global HIV drug resistance surveillance.

Authors:  Silvia Bertagnolio; Neil T Parkin; Michael Jordan; James Brooks; J Gerardo García-Lerma
Journal:  AIDS Rev       Date:  2010 Oct-Dec       Impact factor: 2.500

5.  Field evaluation of dried blood spots for routine HIV-1 viral load and drug resistance monitoring in patients receiving antiretroviral therapy in Africa and Asia.

Authors:  Marjorie Monleau; Avelin F Aghokeng; Sabrina Eymard-Duvernay; Anoumou Dagnra; Dramane Kania; Nicole Ngo-Giang-Huong; Coumba Touré-Kane; Lien X T Truong; Marie-Laure Chaix; Eric Delaporte; Ahidjo Ayouba; Martine Peeters
Journal:  J Clin Microbiol       Date:  2013-12-11       Impact factor: 5.948

6.  Dried blood spot specimens are a suitable alternative sample type for HIV-1 viral load measurement and drug resistance genotyping in patients receiving first-line antiretroviral therapy.

Authors:  Erin K Rottinghaus; Richard Ugbena; Karidia Diallo; Orji Bassey; Aderemi Azeez; Joshua Devos; Guoqing Zhang; John Aberle-Grasse; John Nkengasong; Chunfu Yang
Journal:  Clin Infect Dis       Date:  2012-03-12       Impact factor: 9.079

7.  Laboratory information system data demonstrate successful implementation of the prevention of mother-to-child transmission programme in South Africa.

Authors:  G G Sherman; R R Lilian; S Bhardwaj; S Candy; P Barron
Journal:  S Afr Med J       Date:  2014-03

8.  Drug resistance among newly diagnosed HIV-infected children in the era of more efficacious antiretroviral prophylaxis.

Authors:  Louise Kuhn; Gillian Hunt; Karl-Günter Technau; Ashraf Coovadia; Johanna Ledwaba; Sam Pickerill; Martina Penazzato; Silvia Bertagnolio; Claude A Mellins; Vivian Black; Lynn Morris; Elaine J Abrams
Journal:  AIDS       Date:  2014-07-17       Impact factor: 4.177

9.  Optimization of a low cost and broadly sensitive genotyping assay for HIV-1 drug resistance surveillance and monitoring in resource-limited settings.

Authors:  Zhiyong Zhou; Nick Wagar; Joshua R DeVos; Erin Rottinghaus; Karidia Diallo; Duc B Nguyen; Orji Bassey; Richard Ugbena; Nellie Wadonda-Kabondo; Michelle S McConnell; Isaac Zulu; Benson Chilima; John Nkengasong; Chunfu Yang
Journal:  PLoS One       Date:  2011-11-23       Impact factor: 3.240

Review 10.  Development of antiretroviral resistance in children with HIV in low- and middle-income countries.

Authors:  Felicity Fitzgerald; Martina Penazzato; Diana Gibb
Journal:  J Infect Dis       Date:  2013-06-15       Impact factor: 5.226

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  4 in total

1.  HIV-1 drug resistance genotyping success rates and correlates of Dried-blood spots and plasma specimen genotyping failure in a resource-limited setting.

Authors:  Jonah Omooja; Nicholas Bbosa; Dan Bugembe Lule; Maria Nannyonjo; Sandra Lunkuse; Faridah Nassolo; Stella Esther Nabirye; Hamidah Namagembe Suubi; Pontiano Kaleebu; Deogratius Ssemwanga
Journal:  BMC Infect Dis       Date:  2022-05-17       Impact factor: 3.667

2.  Alternative Sample Types for HIV-1 Antiretroviral Drug Resistance Testing.

Authors:  Dolly Singh; Adit Dhummakupt; Lilly Siems; Deborah Persaud
Journal:  J Infect Dis       Date:  2017-12-01       Impact factor: 5.226

3.  High nonnucleoside reverse transcriptase inhibitor resistance levels in HIV-1-infected Zambian mother-infant pairs.

Authors:  Sydney J Bennett; Catherine Chunda-Liyoka; Lisa K Poppe; Katie Meinders; Chisanga Chileshe; John T West; Charles Wood
Journal:  AIDS       Date:  2020-10-01       Impact factor: 4.632

4.  HIV-1 viraemia and drug resistance amongst female sex workers in Soweto, South Africa: A cross sectional study.

Authors:  Jenny Coetzee; Gillian Hunt; Maya Jaffer; Kennedy Otwombe; Lesley Scott; Asiashu Bongwe; Johanna Ledwaba; Sephonono Molema; Rachel Jewkes; Glenda E Gray
Journal:  PLoS One       Date:  2017-12-15       Impact factor: 3.240

  4 in total

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