Literature DB >> 24477408

The RABiT: high-throughput technology for assessing global DSB repair.

Helen C Turner1, P Sharma, J R Perrier, A Bertucci, L Smilenov, G Johnson, M Taveras, D J Brenner, G Garty.   

Abstract

At the Center for High-Throughput Minimally Invasive Radiation Biodosimetry, we have developed a rapid automated biodosimetry tool (RABiT); this is a completely automated, ultra-high-throughput robotically based biodosimetry workstation designed for use following a large-scale radiological event, to perform radiation biodosimetry measurements based on a fingerstick blood sample. High throughput is achieved through purpose built robotics, sample handling in filter-bottomed multi-well plates and innovations in high-speed imaging and analysis. Currently, we are adapting the RABiT technologies for use in laboratory settings, for applications in epidemiological and clinical studies. Our overall goal is to extend the RABiT system to directly measure the kinetics of DNA repair proteins. The design of the kinetic/time-dependent studies is based on repeated, automated sampling of lymphocytes from a central reservoir of cells housed in the RABiT incubator as a function of time after the irradiation challenge. In the present study, we have characterized the DNA repair kinetics of the following repair proteins: γ-H2AX, 53-BP1, ATM kinase, MDC1 at multiple times (0.5, 2, 4, 7 and 24 h) after irradiation with 4 Gy γ rays. In order to provide a consistent dose exposure at time zero, we have developed an automated capillary irradiator to introduce DNA DSBs into fingerstick-size blood samples within the RABiT. To demonstrate the scalability of the laboratory-based RABiT system, we have initiated a population study using γ-H2AX as a biomarker.

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Year:  2014        PMID: 24477408      PMCID: PMC3999265          DOI: 10.1007/s00411-014-0514-0

Source DB:  PubMed          Journal:  Radiat Environ Biophys        ISSN: 0301-634X            Impact factor:   1.925


  41 in total

Review 1.  Histone H2AX in DNA damage and repair.

Authors:  Olga A Sedelnikova; Duane R Pilch; Christophe Redon; William M Bonner
Journal:  Cancer Biol Ther       Date:  2003 May-Jun       Impact factor: 4.742

2.  DNA double-strand break repair of blood lymphocytes and normal tissues analysed in a preclinical mouse model: implications for radiosensitivity testing.

Authors:  Claudia E Rübe; Saskia Grudzenski; Martin Kühne; Xiaorong Dong; Nicole Rief; Markus Löbrich; Christian Rübe
Journal:  Clin Cancer Res       Date:  2008-10-15       Impact factor: 12.531

Review 3.  MDC1: The art of keeping things in focus.

Authors:  Stephanie Jungmichel; Manuel Stucki
Journal:  Chromosoma       Date:  2010-03-12       Impact factor: 4.316

4.  Assessing 'radiosensitivity' with kinetic profiles of γ-H2AX, 53BP1 and BRCA1 foci.

Authors:  Nathan T Martin; Shareef A Nahas; Rashmi Tunuguntla; Francesca Fike; Richard A Gatti
Journal:  Radiother Oncol       Date:  2011-06-30       Impact factor: 6.280

5.  Evidence for a lack of DNA double-strand break repair in human cells exposed to very low x-ray doses.

Authors:  Kai Rothkamm; Markus Löbrich
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-04       Impact factor: 11.205

6.  Expression of phosphorylated histone H2AX in cultured cell lines following exposure to X-rays.

Authors:  S H MacPhail; J P Banáth; T Y Yu; E H M Chu; H Lambur; P L Olive
Journal:  Int J Radiat Biol       Date:  2003-05       Impact factor: 2.694

7.  Radiation sensitivity, H2AX phosphorylation, and kinetics of repair of DNA strand breaks in irradiated cervical cancer cell lines.

Authors:  Judit P Banáth; Susan H Macphail; Peggy L Olive
Journal:  Cancer Res       Date:  2004-10-01       Impact factor: 12.701

8.  The RABIT: a rapid automated biodosimetry tool for radiological triage.

Authors:  Guy Garty; Youhua Chen; Alessio Salerno; Helen Turner; Jian Zhang; Oleksandra Lyulko; Antonella Bertucci; Yanping Xu; Hongliang Wang; Nabil Simaan; Gerhard Randers-Pehrson; Y Lawrence Yao; Sally A Amundson; David J Brenner
Journal:  Health Phys       Date:  2010-02       Impact factor: 1.316

9.  Automated Recognition of Robotic Manipulation Failures in High-throughput Biodosimetry Tool.

Authors:  Youhua Chen; Hongliang Wang; Jian Zhang; Guy Garty; Nabil Simaan; Y Lawrence Yao; David J Brenner
Journal:  Expert Syst Appl       Date:  2012-08       Impact factor: 6.954

10.  HUMN project: detailed description of the scoring criteria for the cytokinesis-block micronucleus assay using isolated human lymphocyte cultures.

Authors:  M Fenech; W P Chang; M Kirsch-Volders; N Holland; S Bonassi; E Zeiger
Journal:  Mutat Res       Date:  2003-01-10       Impact factor: 2.433

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  18 in total

Review 1.  Radiation signature on exposed cells: Relevance in dose estimation.

Authors:  Venkatachalam Perumal; Tamizh Selvan Gnana Sekaran; Venkateswarlu Raavi; Safa Abdul Syed Basheerudeen; Karthik Kanagaraj; Amith Roy Chowdhury; Solomon Fd Paul
Journal:  World J Radiol       Date:  2015-09-28

2.  An automated imaging system for radiation biodosimetry.

Authors:  Guy Garty; Alan W Bigelow; Mikhail Repin; Helen C Turner; Dakai Bian; Adayabalam S Balajee; Oleksandra V Lyulko; Maria Taveras; Y Lawrence Yao; David J Brenner
Journal:  Microsc Res Tech       Date:  2015-05-04       Impact factor: 2.769

3.  EPRBioDose 2013: EPR applications and biological dosimetry.

Authors:  A Wieser; F Darroudi
Journal:  Radiat Environ Biophys       Date:  2014-03-19       Impact factor: 1.925

4.  THE DECADE OF THE RABiT (2005-15).

Authors:  G Garty; H C Turner; A Salerno; A Bertucci; J Zhang; Y Chen; A Dutta; P Sharma; D Bian; M Taveras; H Wang; A Bhatla; A Balajee; A W Bigelow; M Repin; O V Lyulko; N Simaan; Y L Yao; D J Brenner
Journal:  Radiat Prot Dosimetry       Date:  2016-07-13       Impact factor: 0.972

5.  Automated Triage Radiation Biodosimetry: Integrating Imaging Flow Cytometry with High-Throughput Robotics to Perform the Cytokinesis-Block Micronucleus Assay.

Authors:  Qi Wang; Matthew A Rodrigues; Mikhail Repin; Sergey Pampou; Lindsay A Beaton-Green; Jay Perrier; Guy Garty; David J Brenner; Helen C Turner; Ruth C Wilkins
Journal:  Radiat Res       Date:  2019-02-19       Impact factor: 2.841

6.  Effect of dose rate on residual γ-H2AX levels and frequency of micronuclei in X-irradiated mouse lymphocytes.

Authors:  H C Turner; I Shuryak; M Taveras; A Bertucci; J R Perrier; C Chen; C D Elliston; G W Johnson; L B Smilenov; S A Amundson; D J Brenner
Journal:  Radiat Res       Date:  2015-03-04       Impact factor: 2.841

Review 7.  Towards precision prevention: Technologies for identifying healthy individuals with high risk of disease.

Authors:  Zachary D Nagel; Bevin P Engelward; David J Brenner; Thomas J Begley; Robert W Sobol; Jason H Bielas; Peter J Stambrook; Qingyi Wei; Jennifer J Hu; Mary Beth Terry; Caroline Dilworth; Kimberly A McAllister; Les Reinlib; Leroy Worth; Daniel T Shaughnessy
Journal:  Mutat Res       Date:  2017-04-06       Impact factor: 2.433

8.  Development of a High-Throughput and Miniaturized Cytokinesis-Block Micronucleus Assay for Use as a Biological Dosimetry Population Triage Tool.

Authors:  Stanley W Lue; Mikhail Repin; Ryan Mahnke; David J Brenner
Journal:  Radiat Res       Date:  2015-07-31       Impact factor: 2.841

9.  Frequency of gamma H2AX foci in healthy volunteers and health workers occupationally exposed to X-irradiation and its relevance in biological dosimetry.

Authors:  Venkateswarlu Raavi; Safa Abdul Syed Basheerudeen; Vijayalakshmi Jagannathan; Santosh Joseph; Nabo Kumar Chaudhury; Perumal Venkatachalam
Journal:  Radiat Environ Biophys       Date:  2016-06-10       Impact factor: 1.925

10.  DNA damage response in peripheral mouse blood leukocytes in vivo after variable, low-dose rate exposure.

Authors:  Qi Wang; Monica Pujol-Canadell; Maria Taveras; Guy Garty; Jay Perrier; Carlos Bueno-Beti; Igor Shuryak; David J Brenner; Helen C Turner
Journal:  Radiat Environ Biophys       Date:  2020-01-02       Impact factor: 1.925

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