Literature DB >> 24449867

Role of clusters in nonclassical nucleation and growth of protein crystals.

Mike Sleutel1, Alexander E S Van Driessche.   

Abstract

The development of multistep nucleation theory has spurred on experimentalists to find intermediate metastable states that are relevant to the solidification pathway of the molecule under interest. A great deal of studies focused on characterizing the so-called "precritical clusters" that may arise in the precipitation process. However, in macromolecular systems, the role that these clusters might play in the nucleation process and in the second stage of the precipitation process, i.e., growth, remains to a great extent unknown. Therefore, using biological macromolecules as a model system, we have studied the mesoscopic intermediate, the solid end state, and the relationship that exists between them. We present experimental evidence that these clusters are liquid-like and stable with respect to the parent liquid and metastable compared with the emerging crystalline phase. The presence of these clusters in the bulk liquid is associated with a nonclassical mechanism of crystal growth and can trigger a self-purifying cascade of impurity-poisoned crystal surfaces. These observations demonstrate that there exists a nontrivial connection between the growth of the macroscopic crystalline phase and the mesoscopic intermediate which should not be ignored. On the other hand, our experimental data also show that clusters existing in protein solutions can significantly increase the nucleation rate and therefore play a relevant role in the nucleation process.

Keywords:  phase transition; prenucleation clusters; self-purification

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Year:  2014        PMID: 24449867      PMCID: PMC3918807          DOI: 10.1073/pnas.1309320111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  Origin of anomalous mesoscopic phases in protein solutions.

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Journal:  J Phys Chem B       Date:  2010-06-10       Impact factor: 2.991

2.  Kinetics of intermediate-mediated self-assembly in nanosized materials: a generic model.

Authors:  James F Lutsko; Vasileios Basios; Grégoire Nicolis; Tom P Caremans; Alexander Aerts; Johan A Martens; Christine E A Kirschhock; Titus S van Erp
Journal:  J Chem Phys       Date:  2010-04-28       Impact factor: 3.488

3.  A metastable prerequisite for the growth of lumazine synthase crystals.

Authors:  Olga Gliko; Nikolaus Neumaier; Weichun Pan; Ilka Haase; Markus Fischer; Adelbert Bacher; Sevil Weinkauf; Peter G Vekilov
Journal:  J Am Chem Soc       Date:  2005-03-16       Impact factor: 15.419

4.  Experimental evidence for two-step nucleation in colloidal crystallization.

Authors:  J R Savage; A D Dinsmore
Journal:  Phys Rev Lett       Date:  2009-05-15       Impact factor: 9.161

5.  How does a transient amorphous precursor template crystallization.

Authors:  Tian Hui Zhang; Xiang Yang Liu
Journal:  J Am Chem Soc       Date:  2007-10-12       Impact factor: 15.419

6.  Clustering in complex fluids.

Authors:  Anthonyd Dinsmore; Paull Dubin; Gregorym Grason
Journal:  J Phys Chem B       Date:  2011-06-09       Impact factor: 2.991

7.  Enhancement of protein crystal nucleation by critical density fluctuations.

Authors:  P R ten Wolde; D Frenkel
Journal:  Science       Date:  1997-09-26       Impact factor: 47.728

8.  Ostwald-like ripening of the anomalous mesoscopic clusters in protein solutions.

Authors:  Ye Li; Vassiliy Lubchenko; Maria A Vorontsova; Luis Filobelo; Peter G Vekilov
Journal:  J Phys Chem B       Date:  2012-08-27       Impact factor: 2.991

9.  Ostwald ripening of clusters during protein crystallization.

Authors:  Aaron M Streets; Stephen R Quake
Journal:  Phys Rev Lett       Date:  2010-04-26       Impact factor: 9.161

10.  Mechanisms of growth for protein and virus crystals.

Authors:  A J Malkin; T A Land; J J DeYoreo; A McPherson
Journal:  Nat Struct Biol       Date:  1995-11
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  26 in total

1.  Lack of Dependence of the Sizes of the Mesoscopic Protein Clusters on Electrostatics.

Authors:  Maria A Vorontsova; Ho Yin Chan; Vassiliy Lubchenko; Peter G Vekilov
Journal:  Biophys J       Date:  2015-11-03       Impact factor: 4.033

2.  Staying Together: Protein Molecules in Mesoscopic Clusters.

Authors:  Anatoly B Kolomeisky
Journal:  Biophys J       Date:  2015-11-03       Impact factor: 4.033

3.  Two types of amorphous protein particles facilitate crystal nucleation.

Authors:  Tomoya Yamazaki; Yuki Kimura; Peter G Vekilov; Erika Furukawa; Manabu Shirai; Hiroaki Matsumoto; Alexander E S Van Driessche; Katsuo Tsukamoto
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-13       Impact factor: 11.205

4.  Multistep crystallization processes: How not to make perfect single crystals.

Authors:  Daniel Bonn; Noushine Shahidzadeh
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-21       Impact factor: 11.205

5.  Experimental measurement of the diamond nucleation landscape reveals classical and nonclassical features.

Authors:  Matthew A Gebbie; Hitoshi Ishiwata; Patrick J McQuade; Vaclav Petrak; Andrew Taylor; Christopher Freiwald; Jeremy E Dahl; Robert M K Carlson; Andrey A Fokin; Peter R Schreiner; Zhi-Xun Shen; Milos Nesladek; Nicholas A Melosh
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-01       Impact factor: 11.205

Review 6.  Nucleation precursors in protein crystallization.

Authors:  Peter G Vekilov; Maria A Vorontsova
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-02-20       Impact factor: 1.056

7.  Transmission electron microscopy for the evaluation and optimization of crystal growth.

Authors:  Hilary P Stevenson; Guowu Lin; Christopher O Barnes; Ieva Sutkeviciute; Troy Krzysiak; Simon C Weiss; Shelley Reynolds; Ying Wu; Veeranagu Nagarajan; Alexander M Makhov; Robert Lawrence; Emily Lamm; Lisa Clark; Timothy J Gardella; Brenda G Hogue; Craig M Ogata; Jinwoo Ahn; Angela M Gronenborn; James F Conway; Jean Pierre Vilardaga; Aina E Cohen; Guillermo Calero
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-04-26       Impact factor: 7.652

8.  Molecular nucleation mechanisms and control strategies for crystal polymorph selection.

Authors:  Alexander E S Van Driessche; Nani Van Gerven; Paul H H Bomans; Rick R M Joosten; Heiner Friedrich; David Gil-Carton; Nico A J M Sommerdijk; Mike Sleutel
Journal:  Nature       Date:  2018-04-04       Impact factor: 49.962

9.  A New Method for Dispersing Pristine Carbon Nanotubes Using Regularly Arranged S-Layer Proteins.

Authors:  Andreas Breitwieser; Uwe B Sleytr; Dietmar Pum
Journal:  Nanomaterials (Basel)       Date:  2021-05-20       Impact factor: 5.076

10.  Nucleation of protein mesocrystals via oriented attachment.

Authors:  Alexander E S Van Driessche; Nani Van Gerven; Rick R M Joosten; Wai Li Ling; Maria Bacia; Nico Sommerdijk; Mike Sleutel
Journal:  Nat Commun       Date:  2021-06-23       Impact factor: 14.919

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