Literature DB >> 20423058

Origin of anomalous mesoscopic phases in protein solutions.

Weichun Pan1, Peter G Vekilov, Vassiliy Lubchenko.   

Abstract

Long-living mesoscopic clusters of a dense protein liquid are a necessary kinetic intermediate for the formation of solid aggregates of native and misfolded protein molecules; in turn, these aggregates underlie physiological and pathological processes and laboratory and industrial procedures. We argue that the clusters consist of a nonequilibrium mixture of single protein molecules and long-lived complexes of proteins. The puzzling mesoscopic size of the clusters is determined by the lifetime and diffusivity of these complexes. We predict and observe a crossover of cluster dynamics to critical-like density fluctuations at high protein concentrations. We predict and experimentally confirm that cluster dynamics obey a universal, diffusion-like scaling with time and wave vector, including in the critical-like regime. Nontrivial dependencies of the cluster size and volume fraction on the protein concentration are established. Possible mechanisms of complex formation include domain swapping, hydration forces, dispersive interactions, and other, system-specific, interactions. We highlight the significance of the hydration interaction and domain swapping with regard to the ubiquity of the clusters and their sensitivity to the chemical composition of the solvent. Our findings suggest novel ways to control protein aggregation.

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Year:  2010        PMID: 20423058     DOI: 10.1021/jp100617w

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  24 in total

1.  Anisotropy of the Coulomb interaction between folded proteins: consequences for mesoscopic aggregation of lysozyme.

Authors:  Ho Yin Chan; Vladimir Lankevich; Peter G Vekilov; Vassiliy Lubchenko
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

2.  Free heme and the polymerization of sickle cell hemoglobin.

Authors:  Veselina V Uzunova; Weichun Pan; Oleg Galkin; Peter G Vekilov
Journal:  Biophys J       Date:  2010-09-22       Impact factor: 4.033

3.  Lack of Dependence of the Sizes of the Mesoscopic Protein Clusters on Electrostatics.

Authors:  Maria A Vorontsova; Ho Yin Chan; Vassiliy Lubchenko; Peter G Vekilov
Journal:  Biophys J       Date:  2015-11-03       Impact factor: 4.033

4.  Staying Together: Protein Molecules in Mesoscopic Clusters.

Authors:  Anatoly B Kolomeisky
Journal:  Biophys J       Date:  2015-11-03       Impact factor: 4.033

5.  Separating instability from aggregation propensity in γS-crystallin variants.

Authors:  William D Brubaker; J Alfredo Freites; Kory J Golchert; Rebecca A Shapiro; Vasilios Morikis; Douglas J Tobias; Rachel W Martin
Journal:  Biophys J       Date:  2011-01-19       Impact factor: 4.033

6.  A stepwise mechanism for aqueous two-phase system formation in concentrated antibody solutions.

Authors:  Bradley A Rogers; Kelvin B Rembert; Matthew F Poyton; Halil I Okur; Amanda R Kale; Tinglu Yang; Jifeng Zhang; Paul S Cremer
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-23       Impact factor: 11.205

Review 7.  Nucleation precursors in protein crystallization.

Authors:  Peter G Vekilov; Maria A Vorontsova
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-02-20       Impact factor: 1.056

8.  Role of clusters in nonclassical nucleation and growth of protein crystals.

Authors:  Mike Sleutel; Alexander E S Van Driessche
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-21       Impact factor: 11.205

9.  Minimal physical requirements for crystal growth self-poisoning.

Authors:  Stephen Whitelam; Yuba Raj Dahal; Jeremy D Schmit
Journal:  J Chem Phys       Date:  2016-02-14       Impact factor: 3.488

Review 10.  Biomolecular Assemblies: Moving from Observation to Predictive Design.

Authors:  Corey J Wilson; Andreas S Bommarius; Julie A Champion; Yury O Chernoff; David G Lynn; Anant K Paravastu; Chen Liang; Ming-Chien Hsieh; Jennifer M Heemstra
Journal:  Chem Rev       Date:  2018-10-03       Impact factor: 60.622

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