Literature DB >> 24598910

Nucleation precursors in protein crystallization.

Peter G Vekilov1, Maria A Vorontsova1.   

Abstract

Protein crystal nucleation is a central problem in biological crystallography and other areas of science, technology and medicine. Recent studies have demonstrated that protein crystal nuclei form within crucial precursors. Here, methods of detection and characterization of the precursors are reviewed: dynamic light scattering, atomic force microscopy and Brownian microscopy. Data for several proteins provided by these methods have demonstrated that the nucleation precursors are clusters consisting of protein-dense liquid, which are metastable with respect to the host protein solution. The clusters are several hundred nanometres in size, the cluster population occupies from 10(-7) to 10(-3) of the solution volume, and their properties in solutions supersaturated with respect to crystals are similar to those in homogeneous, i.e. undersaturated, solutions. The clusters exist owing to the conformation flexibility of the protein molecules, leading to exposure of hydrophobic surfaces and enhanced intermolecular binding. These results indicate that protein conformational flexibility might be the mechanism behind the metastable mesoscopic clusters and crystal nucleation. Investigations of the cluster properties are still in their infancy. Results on direct imaging of cluster behaviors and characterization of cluster mechanisms with a variety of proteins will soon lead to major breakthroughs in protein biophysics.

Keywords:  crystallization; nucleation mechanism; partial unfolding; protein crystals; protein-rich clusters; two-step nucleation

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Year:  2014        PMID: 24598910      PMCID: PMC3944685          DOI: 10.1107/S2053230X14002386

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  57 in total

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Authors:  Ye Li; Vassiliy Lubchenko; Peter G Vekilov
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  6 in total

1.  Automation in biological crystallization.

Authors:  Patrick Shaw Stewart; Jochen Mueller-Dieckmann
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-05-28       Impact factor: 1.056

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Journal:  Biophys Rev       Date:  2017-12-06

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Authors:  Allen P Minton
Journal:  Anal Biochem       Date:  2016-02-17       Impact factor: 3.365

Review 4.  The "Sticky Patch" Model of Crystallization and Modification of Proteins for Enhanced Crystallizability.

Authors:  Zygmunt S Derewenda; Adam Godzik
Journal:  Methods Mol Biol       Date:  2017

5.  Liquid Metastable Precursors of Ibuprofen as Aqueous Nucleation Intermediates.

Authors:  Eduard Wiedenbeck; Michael Kovermann; Denis Gebauer; Helmut Cölfen
Journal:  Angew Chem Int Ed Engl       Date:  2019-11-06       Impact factor: 15.336

6.  Online Monitoring of the Concentrations of Amorphous and Crystalline Mesoscopic Species Present in Solution.

Authors:  Byeongho Ahn; Michele Chen; Marco Mazzotti
Journal:  Cryst Growth Des       Date:  2022-07-13       Impact factor: 4.010

  6 in total

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