Literature DB >> 24333588

Nanoprobing of misfolding and interactions of amyloid β 42 protein.

Bo-Hyun Kim1, Yuri L Lyubchenko2.   

Abstract

The assembly of amyloid β (Aβ) proteins into nanostructures is currently considered a major pathway of Alzheimer's disease development, but the molecular mechanisms of this self-assembly process remains unclear. Recently, we showed that single-molecule AFM force spectroscopy (SMFS) is capable of probing the dynamics and interaction between Aβ40 peptides, and these studies allowed us to shed new light on transiently existing Aβ40 misfolding states. In this study, we applied the same SMFS approach to characterize the misfolding of Aβ42 peptide, the most toxic Aβ alloform. The quantitative analysis of SMFS data demonstrated that Aβ interaction leads to the formation of dimers with a lifetime in the range of a second. Interaction via C-terminal segments prevailed at pH 7, but interaction within the peptide center prevailed at acidic pH levels. The difference in the misfolding properties for Aβ40 and Aβ42 peptides and the mechanisms of amyloid nanoassembly are discussed. FROM THE CLINICAL EDITOR: Despite decades of intense research, Alzheimer's disease still remains incurable. This novel study focuses on the assembly of amyloid β proteins into nanostructures, which is a key mechanism in Alzheimer's disease development. Single molecule atomic force spectroscopy is utilized to shed light on the molecular mechanisms of this self-assembly process.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Amyloid beta; Contour length; Dimerization pathways; Misfolding; Single-molecule force spectroscopy

Mesh:

Substances:

Year:  2013        PMID: 24333588      PMCID: PMC4019693          DOI: 10.1016/j.nano.2013.11.016

Source DB:  PubMed          Journal:  Nanomedicine        ISSN: 1549-9634            Impact factor:   5.307


  34 in total

1.  Partially folded intermediates as critical precursors of light chain amyloid fibrils and amorphous aggregates.

Authors:  R Khurana; J R Gillespie; A Talapatra; L J Minert; C Ionescu-Zanetti; I Millett; A L Fink
Journal:  Biochemistry       Date:  2001-03-27       Impact factor: 3.162

2.  Solid-state synthesis and mechanical unfolding of polymers of T4 lysozyme.

Authors:  G Yang; C Cecconi; W A Baase; I R Vetter; W A Breyer; J A Haack; B W Matthews; F W Dahlquist; C Bustamante
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-04       Impact factor: 11.205

3.  Rapid photochemical cross-linking--a new tool for studies of metastable, amyloidogenic protein assemblies.

Authors:  Gal Bitan; David B Teplow
Journal:  Acc Chem Res       Date:  2004-06       Impact factor: 22.384

Review 4.  Nanoimaging for protein misfolding diseases.

Authors:  Yuri L Lyubchenko; Bo-Hyun Kim; Alexey V Krasnoslobodtsev; Junping Yu
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2010 Sep-Oct

5.  Soluble amyloid beta-protein dimers isolated from Alzheimer cortex directly induce Tau hyperphosphorylation and neuritic degeneration.

Authors:  Ming Jin; Nina Shepardson; Ting Yang; Gang Chen; Dominic Walsh; Dennis J Selkoe
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-18       Impact factor: 11.205

6.  Protein interactions and misfolding analyzed by AFM force spectroscopy.

Authors:  Chad McAllister; Mikhail A Karymov; Yoshiko Kawano; Alexander Y Lushnikov; Andrew Mikheikin; Vladimir N Uversky; Yuri L Lyubchenko
Journal:  J Mol Biol       Date:  2005-11-02       Impact factor: 5.469

7.  pH effects on the conformational preferences of amyloid beta-peptide (1-40) in HFIP aqueous solution by NMR spectroscopy.

Authors:  Mariacristina Valerio; Fernando Porcelli; Joseph P Zbilut; Alessandro Giuliani; Cesare Manetti; Filippo Conti
Journal:  ChemMedChem       Date:  2008-05       Impact factor: 3.466

8.  Single-molecule atomic force microscopy force spectroscopy study of Aβ-40 interactions.

Authors:  Bo-Hyun Kim; Nicholas Y Palermo; Sandor Lovas; Tatiana Zaikova; John F W Keana; Yuri L Lyubchenko
Journal:  Biochemistry       Date:  2011-05-17       Impact factor: 3.162

9.  Dynamic properties of pH-dependent structural organization of the amyloidogenic beta-protein (1-40).

Authors:  Alexander Rubinstein; Yuri L Lyubchenko; Simon Sherman
Journal:  Prion       Date:  2009-01-10       Impact factor: 3.931

10.  Nanoprobing of α-synuclein misfolding and aggregation with atomic force microscopy.

Authors:  Junping Yu; Julia Warnke; Yuri L Lyubchenko
Journal:  Nanomedicine       Date:  2010-09-30       Impact factor: 5.307

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  12 in total

1.  Direct Detection of α-Synuclein Dimerization Dynamics: Single-Molecule Fluorescence Analysis.

Authors:  Zhengjian Lv; Alexey V Krasnoslobodtsev; Yuliang Zhang; Daniel Ysselstein; Jean-Christophe Rochet; Scott C Blanchard; Yuri L Lyubchenko
Journal:  Biophys J       Date:  2015-04-21       Impact factor: 4.033

2.  The structure of misfolded amyloidogenic dimers: computational analysis of force spectroscopy data.

Authors:  Yuliang Zhang; Yuri L Lyubchenko
Journal:  Biophys J       Date:  2014-12-16       Impact factor: 4.033

Review 3.  Amyloid β Protein and Alzheimer's Disease: When Computer Simulations Complement Experimental Studies.

Authors:  Jessica Nasica-Labouze; Phuong H Nguyen; Fabio Sterpone; Olivia Berthoumieu; Nicolae-Viorel Buchete; Sébastien Coté; Alfonso De Simone; Andrew J Doig; Peter Faller; Angel Garcia; Alessandro Laio; Mai Suan Li; Simone Melchionna; Normand Mousseau; Yuguang Mu; Anant Paravastu; Samuela Pasquali; David J Rosenman; Birgit Strodel; Bogdan Tarus; John H Viles; Tong Zhang; Chunyu Wang; Philippe Derreumaux
Journal:  Chem Rev       Date:  2015-03-19       Impact factor: 60.622

4.  Effect of acidic pH on the stability of α-synuclein dimers.

Authors:  Zhengjian Lv; Alexey V Krasnoslobodtsev; Yuliang Zhang; Daniel Ysselstein; Jean Christophe Rochet; Scott C Blanchard; Yuri L Lyubchenko
Journal:  Biopolymers       Date:  2016-10       Impact factor: 2.505

5.  Force clamp approach for characterization of nano-assembly in amyloid beta 42 dimer.

Authors:  Sibaprasad Maity; Yuri L Lyubchenko
Journal:  Nanoscale       Date:  2019-06-18       Impact factor: 7.790

6.  Probing of Amyloid Aβ (14-23) Trimers by Single-Molecule Force Spectroscopy.

Authors:  Sibaprasad Maity; Yuri L Lyubchenko
Journal:  Jacobs J Mol Transl Med       Date:  2015-06-09

7.  Self-assembly of the full-length amyloid Aβ42 protein in dimers.

Authors:  Yuliang Zhang; Mohtadin Hashemi; Zhengjian Lv; Yuri L Lyubchenko
Journal:  Nanoscale       Date:  2016-10-06       Impact factor: 7.790

Review 8.  Structural biology of cell surface receptors implicated in Alzheimer's disease.

Authors:  Stefan J Hermans; Tracy L Nero; Craig J Morton; Jonathan H Gooi; Gabriela A N Crespi; Nancy C Hancock; Chen Gao; Kenta Ishii; Jasmina Markulić; Michael W Parker
Journal:  Biophys Rev       Date:  2021-11-18

9.  Monomer Dynamics of Alzheimer Peptides and Kinetic Control of Early Aggregation in Alzheimer's Disease.

Authors:  Srabasti Acharya; Kinshuk R Srivastava; Sureshbabu Nagarajan; Lisa J Lapidus
Journal:  Chemphyschem       Date:  2016-09-15       Impact factor: 3.102

10.  Visualizing and trapping transient oligomers in amyloid assembly pathways.

Authors:  Emma E Cawood; Theodoros K Karamanos; Andrew J Wilson; Sheena E Radford
Journal:  Biophys Chem       Date:  2020-11-10       Impact factor: 2.352

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