Literature DB >> 24244074

Classification of small lesions in dynamic breast MRI: Eliminating the need for precise lesion segmentation through spatio-temporal analysis of contrast enhancement over time.

Mahesh B Nagarajan1, Markus B Huber, Thomas Schlossbauer, Gerda Leinsinger, Andrzej Krol, Axel Wismüller.   

Abstract

Characterizing the dignity of breast lesions as benign or malignant is specifically difficult for small lesions; they don't exhibit typical characteristics of malignancy and are harder to segment since margins are harder to visualize. Previous attempts at using dynamic or morphologic criteria to classify small lesions (mean lesion diameter of about 1 cm) have not yielded satisfactory results. The goal of this work was to improve the classification performance in such small diagnostically challenging lesions while concurrently eliminating the need for precise lesion segmentation. To this end, we introduce a method for topological characterization of lesion enhancement patterns over time. Three Minkowski Functionals were extracted from all five post-contrast images of sixty annotated lesions on dynamic breast MRI exams. For each Minkowski Functional, topological features extracted from each post-contrast image of the lesions were combined into a high-dimensional texture feature vector. These feature vectors were classified in a machine learning task with support vector regression. For comparison, conventional Haralick texture features derived from gray-level co-occurrence matrices (GLCM) were also used. A new method for extracting thresholded GLCM features was also introduced and investigated here. The best classification performance was observed with Minkowski Functionals area and perimeter, thresholded GLCM features f8 and f9, and conventional GLCM features f4 and f6. However, both Minkowski Functionals and thresholded GLCM achieved such results without lesion segmentation while the performance of GLCM features significantly deteriorated when lesions were not segmented (p < 0.05). This suggests that such advanced spatio-temporal characterization can improve the classification performance achieved in such small lesions, while simultaneously eliminating the need for precise segmentation.

Entities:  

Keywords:  Minkowski Functionals; dynamic breast MRI; mutual information; support vector regression; topological texture features

Year:  2013        PMID: 24244074      PMCID: PMC3826664          DOI: 10.1007/s00138-012-0456-y

Source DB:  PubMed          Journal:  Mach Vis Appl        ISSN: 0932-8092            Impact factor:   2.012


  23 in total

1.  Nonrigid registration using free-form deformations: application to breast MR images.

Authors:  D Rueckert; L I Sonoda; C Hayes; D L Hill; M O Leach; D J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  1999-08       Impact factor: 10.048

2.  Dynamic breast MR imaging: are signal intensity time course data useful for differential diagnosis of enhancing lesions?

Authors:  C K Kuhl; P Mielcareck; S Klaschik; C Leutner; E Wardelmann; J Gieseke; H H Schild
Journal:  Radiology       Date:  1999-04       Impact factor: 11.105

3.  A fuzzy c-means (FCM)-based approach for computerized segmentation of breast lesions in dynamic contrast-enhanced MR images.

Authors:  Weijie Chen; Maryellen L Giger; Ulrich Bick
Journal:  Acad Radiol       Date:  2006-01       Impact factor: 3.173

4.  Volumetric texture analysis of breast lesions on contrast-enhanced magnetic resonance images.

Authors:  Weijie Chen; Maryellen L Giger; Hui Li; Ulrich Bick; Gillian M Newstead
Journal:  Magn Reson Med       Date:  2007-09       Impact factor: 4.668

5.  Performance of topological texture features to classify fibrotic interstitial lung disease patterns.

Authors:  Markus B Huber; Mahesh B Nagarajan; Gerda Leinsinger; Roger Eibel; Lawrence A Ray; Axel Wismüller
Journal:  Med Phys       Date:  2011-04       Impact factor: 4.071

6.  Differentiation between post-menopausal women with and without hip fractures: enhanced evaluation of clinical DXA by topological analysis of the mineral distribution in the scan images.

Authors:  H F Boehm; T Vogel; A Panteleon; D Burklein; H Bitterling; M Reiser
Journal:  Osteoporos Int       Date:  2007-01-18       Impact factor: 4.507

7.  Classification of hypervascularized lesions in CE MR imaging of the breast.

Authors:  F Baum; U Fischer; R Vosshenrich; E Grabbe
Journal:  Eur Radiol       Date:  2002-02-02       Impact factor: 5.315

8.  STEP: spatiotemporal enhancement pattern for MR-based breast tumor diagnosis.

Authors:  Yuanjie Zheng; Sarah Englander; Sajjad Baloch; Evangelia I Zacharaki; Yong Fan; Mitchell D Schnall; Dinggang Shen
Journal:  Med Phys       Date:  2009-07       Impact factor: 4.071

9.  Computerized analysis of breast lesions in three dimensions using dynamic magnetic-resonance imaging.

Authors:  K G Gilhuijs; M L Giger; U Bick
Journal:  Med Phys       Date:  1998-09       Impact factor: 4.071

10.  Quantitative analysis of lesion morphology and texture features for diagnostic prediction in breast MRI.

Authors:  Ke Nie; Jeon-Hor Chen; Hon J Yu; Yong Chu; Orhan Nalcioglu; Min-Ying Su
Journal:  Acad Radiol       Date:  2008-12       Impact factor: 3.173

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  27 in total

1.  Incorporating texture features in a computer-aided breast lesion diagnosis system for automated three-dimensional breast ultrasound.

Authors:  Haixia Liu; Tao Tan; Jan van Zelst; Ritse Mann; Nico Karssemeijer; Bram Platel
Journal:  J Med Imaging (Bellingham)       Date:  2014-07-25

2.  Computer-aided diagnosis for phase-contrast X-ray computed tomography: quantitative characterization of human patellar cartilage with high-dimensional geometric features.

Authors:  Mahesh B Nagarajan; Paola Coan; Markus B Huber; Paul C Diemoz; Christian Glaser; Axel Wismüller
Journal:  J Digit Imaging       Date:  2014-02       Impact factor: 4.056

3.  Introducing Anisotropic Minkowski Functionals and Quantitative Anisotropy Measures for Local Structure Analysis in Biomedical Imaging.

Authors:  Axel Wismüller; Titas De; Eva Lochmüller; Felix Eckstein; Mahesh B Nagarajan
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-03-29

4.  Mutual Connectivity Analysis (MCA) Using Generalized Radial Basis Function Neural Networks for Nonlinear Functional Connectivity Network Recovery in Resting-State Functional MRI.

Authors:  Adora M DSouza; Anas Zainul Abidin; Mahesh B Nagarajan; Axel Wismüller
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-29

5.  Large-Scale Granger Causality Analysis on Resting-State Functional MRI.

Authors:  Adora M DSouza; Anas Zainul Abidin; Lutz Leistritz; Axel Wismüller
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03

6.  Predicting the Biomechanical Strength of Proximal Femur Specimens with Minkowski Functionals and Support Vector Regression.

Authors:  Chien-Chun Yang; Mahesh B Nagarajan; Markus B Huber; Julio Carballido-Gamio; Jan S Bauer; Thomas Baum; Felix Eckstein; Eva-Maria Lochmüller; Thomas M Link; Axel Wismüller
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2014-03-13

7.  Investigating the use of texture features for analysis of breast lesions on contrast-enhanced cone beam CT.

Authors:  Xixi Wang; Mahesh B Nagarajan; David Conover; Ruola Ning; Avice O'Connell; Axel Wismüller
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2014-04-09

8.  Using Anisotropic 3D Minkowski Functionals for Trabecular Bone Characterization and Biomechanical Strength Prediction in Proximal Femur Specimens.

Authors:  Mahesh B Nagarajan; Titas De; Eva-Maria Lochmüller; Felix Eckstein; Axel Wismüller
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2014-04-09

9.  Investigating Changes in Resting-State Connectivity from Functional MRI Data in Patients with HIV Associated Neurocognitive Disorder Using MCA and Machine Learning.

Authors:  Adora M DSouza; Anas Z Abidin; Axel Wismüller
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-03-13

10.  Investigating the use of mutual information and non-metric clustering for functional connectivity analysis on resting-state functional MRI.

Authors:  Xixi Wang; Mahesh B Nagarajan; Anas Z Abidin; Adora DSouza; Susan K Hobbs; Axel Wismüller
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2015-03-17
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