Literature DB >> 24043594

Computer-aided diagnosis for phase-contrast X-ray computed tomography: quantitative characterization of human patellar cartilage with high-dimensional geometric features.

Mahesh B Nagarajan1, Paola Coan, Markus B Huber, Paul C Diemoz, Christian Glaser, Axel Wismüller.   

Abstract

Phase-contrast computed tomography (PCI-CT) has shown tremendous potential as an imaging modality for visualizing human cartilage with high spatial resolution. Previous studies have demonstrated the ability of PCI-CT to visualize (1) structural details of the human patellar cartilage matrix and (2) changes to chondrocyte organization induced by osteoarthritis. This study investigates the use of high-dimensional geometric features in characterizing such chondrocyte patterns in the presence or absence of osteoarthritic damage. Geometrical features derived from the scaling index method (SIM) and statistical features derived from gray-level co-occurrence matrices were extracted from 842 regions of interest (ROI) annotated on PCI-CT images of ex vivo human patellar cartilage specimens. These features were subsequently used in a machine learning task with support vector regression to classify ROIs as healthy or osteoarthritic; classification performance was evaluated using the area under the receiver-operating characteristic curve (AUC). SIM-derived geometrical features exhibited the best classification performance (AUC, 0.95 ± 0.06) and were most robust to changes in ROI size. These results suggest that such geometrical features can provide a detailed characterization of the chondrocyte organization in the cartilage matrix in an automated and non-subjective manner, while also enabling classification of cartilage as healthy or osteoarthritic with high accuracy. Such features could potentially serve as imaging markers for evaluating osteoarthritis progression and its response to different therapeutic intervention strategies.

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Mesh:

Year:  2014        PMID: 24043594      PMCID: PMC3903967          DOI: 10.1007/s10278-013-9634-3

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.056


  26 in total

1.  Scaling-index method as an image processing tool in scanning-probe microscopy.

Authors:  F Jamitzky; R W Stark; W Bunk; S Thalhammer; C Rath; T Aschenbrenner; G E Morfill; W M Heckl
Journal:  Ultramicroscopy       Date:  2001-01       Impact factor: 2.689

2.  Volumetric texture analysis of breast lesions on contrast-enhanced magnetic resonance images.

Authors:  Weijie Chen; Maryellen L Giger; Hui Li; Ulrich Bick; Gillian M Newstead
Journal:  Magn Reson Med       Date:  2007-09       Impact factor: 4.668

3.  Characterization of osteoarthritic and normal human patella cartilage by computed tomography X-ray phase-contrast imaging: a feasibility study.

Authors:  Paola Coan; Fabian Bamberg; Paul C Diemoz; Alberto Bravin; Kirsten Timpert; Elisabeth Mützel; Jose G Raya; Silvia Adam-Neumair; Maximilian F Reiser; Christian Glaser
Journal:  Invest Radiol       Date:  2010-07       Impact factor: 6.016

4.  Performance of topological texture features to classify fibrotic interstitial lung disease patterns.

Authors:  Markus B Huber; Mahesh B Nagarajan; Gerda Leinsinger; Roger Eibel; Lawrence A Ray; Axel Wismüller
Journal:  Med Phys       Date:  2011-04       Impact factor: 4.071

5.  Prediction of biomechanical properties of trabecular bone in MR images with geometric features and support vector regression.

Authors:  Markus B Huber; Sarah L Lancianese; Mahesh B Nagarajan; Imoh Z Ikpot; Amy L Lerner; Axel Wismuller
Journal:  IEEE Trans Biomed Eng       Date:  2011-02-28       Impact factor: 4.538

6.  In vivo x-ray phase contrast analyzer-based imaging for longitudinal osteoarthritis studies in guinea pigs.

Authors:  Paola Coan; Andreas Wagner; Alberto Bravin; Paul C Diemoz; Jani Keyriläinen; Juergen Mollenhauer
Journal:  Phys Med Biol       Date:  2010-11-26       Impact factor: 3.609

7.  Diffraction-enhanced X-ray imaging of articular cartilage.

Authors:  J Mollenhauer; M E Aurich; Z Zhong; C Muehleman; A A Cole; M Hasnah; O Oltulu; K E Kuettner; A Margulis; L D Chapman
Journal:  Osteoarthritis Cartilage       Date:  2002-03       Impact factor: 6.576

8.  Mammography with synchrotron radiation: first clinical experience with phase-detection technique.

Authors:  Edoardo Castelli; Maura Tonutti; Fulvia Arfelli; Renata Longo; Emilio Quaia; Luigi Rigon; Daniela Sanabor; Fabrizio Zanconati; Diego Dreossi; Alessando Abrami; Elisa Quai; Paola Bregant; Katia Casarin; Valentina Chenda; Ralf Hendrik Menk; Tatjana Rokvic; Alessandro Vascotto; Giuliana Tromba; Maria Assunta Cova
Journal:  Radiology       Date:  2011-03-24       Impact factor: 11.105

9.  Costs attributable to osteoarthritis.

Authors:  C H MacLean; K Knight; H Paulus; R H Brook; P G Shekelle
Journal:  J Rheumatol       Date:  1998-11       Impact factor: 4.666

10.  Classification of small lesions in dynamic breast MRI: Eliminating the need for precise lesion segmentation through spatio-temporal analysis of contrast enhancement over time.

Authors:  Mahesh B Nagarajan; Markus B Huber; Thomas Schlossbauer; Gerda Leinsinger; Andrzej Krol; Axel Wismüller
Journal:  Mach Vis Appl       Date:  2013-10-01       Impact factor: 2.012

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  12 in total

1.  Predicting the Biomechanical Strength of Proximal Femur Specimens with Minkowski Functionals and Support Vector Regression.

Authors:  Chien-Chun Yang; Mahesh B Nagarajan; Markus B Huber; Julio Carballido-Gamio; Jan S Bauer; Thomas Baum; Felix Eckstein; Eva-Maria Lochmüller; Thomas M Link; Axel Wismüller
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2014-03-13

2.  Investigating the use of texture features for analysis of breast lesions on contrast-enhanced cone beam CT.

Authors:  Xixi Wang; Mahesh B Nagarajan; David Conover; Ruola Ning; Avice O'Connell; Axel Wismüller
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2014-04-09

3.  Using Anisotropic 3D Minkowski Functionals for Trabecular Bone Characterization and Biomechanical Strength Prediction in Proximal Femur Specimens.

Authors:  Mahesh B Nagarajan; Titas De; Eva-Maria Lochmüller; Felix Eckstein; Axel Wismüller
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2014-04-09

4.  Deep transfer learning for characterizing chondrocyte patterns in phase contrast X-Ray computed tomography images of the human patellar cartilage.

Authors:  Anas Z Abidin; Botao Deng; Adora M DSouza; Mahesh B Nagarajan; Paola Coan; Axel Wismüller
Journal:  Comput Biol Med       Date:  2018-02-09       Impact factor: 4.589

5.  Volumetric quantitative characterization of human patellar cartilage with topological and geometrical features on phase-contrast X-ray computed tomography.

Authors:  Mahesh B Nagarajan; Paola Coan; Markus B Huber; Paul C Diemoz; Axel Wismüller
Journal:  Med Biol Eng Comput       Date:  2015-07-04       Impact factor: 2.602

6.  Polarized reflectance from articular cartilage depends upon superficial zone collagen network microstructure.

Authors:  R N Huynh; B Pesante; G Nehmetallah; C B Raub
Journal:  Biomed Opt Express       Date:  2019-10-03       Impact factor: 3.732

7.  Phase contrast imaging X-ray computed tomography: Quantitative characterization of human patellar cartilage matrix with topological and geometrical features.

Authors:  Mahesh B Nagarajan; Paola Coan; Markus B Huber; Paul C Diemoz; Axel Wismüller
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2014-03-13

8.  Integrating dimension reduction and out-of-sample extension in automated classification of ex vivo human patellar cartilage on phase contrast X-ray computed tomography.

Authors:  Mahesh B Nagarajan; Paola Coan; Markus B Huber; Paul C Diemoz; Axel Wismüller
Journal:  PLoS One       Date:  2015-02-24       Impact factor: 3.240

9.  Multiscale Mask R-CNN-Based Lung Tumor Detection Using PET Imaging.

Authors:  Rui Zhang; Chao Cheng; Xuehua Zhao; Xuechen Li
Journal:  Mol Imaging       Date:  2019 Jan-Dec       Impact factor: 4.488

Review 10.  Machine Learning in Orthopedics: A Literature Review.

Authors:  Federico Cabitza; Angela Locoro; Giuseppe Banfi
Journal:  Front Bioeng Biotechnol       Date:  2018-06-27
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