Literature DB >> 24190518

Maintenance of epigenetic information: a noncoding RNA perspective.

Tanmoy Mondal1, Chandrasekhar Kanduri.   

Abstract

Along the lines of established players like chromatin modifiers and transcription factors, noncoding RNA (ncRNA) are now widely accepted as one of the key regulatory molecules in epigenetic regulation of transcription. With increasing evidence of ncRNAs in the establishment of gene silencing through their ability to interact with major chromatin modifiers, in the current review, we discuss their prospective role in the area of inheritance and maintenance of these established silenced states which can be reversible or irreversible in nature. In addition, we attempt to understand and speculate how these RNA dependent or independent maintenance mechanisms differ between each other in a developmental stage, tissue, and gene-specific manner in different biological contexts by utilizing known/unknown regulatory factors.

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Year:  2013        PMID: 24190518     DOI: 10.1007/s10577-013-9385-5

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  51 in total

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Review 3.  Kcnq1ot1: a chromatin regulatory RNA.

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Journal:  Semin Cell Dev Biol       Date:  2011-02-21       Impact factor: 7.727

4.  Imprinted Igf2r silencing depends on continuous Airn lncRNA expression and is not restricted to a developmental window.

Authors:  Federica Santoro; Daniela Mayer; Ruth M Klement; Katarzyna E Warczok; Alexey Stukalov; Denise P Barlow; Florian M Pauler
Journal:  Development       Date:  2013-03       Impact factor: 6.868

5.  Role for piRNAs and noncoding RNA in de novo DNA methylation of the imprinted mouse Rasgrf1 locus.

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6.  Genome imprinting regulated by the mouse Polycomb group protein Eed.

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7.  Kcnq1ot1 noncoding RNA mediates transcriptional gene silencing by interacting with Dnmt1.

Authors:  Faizaan Mohammad; Tanmoy Mondal; Natalia Guseva; Gaurav Kumar Pandey; Chandrasekhar Kanduri
Journal:  Development       Date:  2010-06-23       Impact factor: 6.868

8.  The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse.

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Journal:  Dev Cell       Date:  2013-01-28       Impact factor: 12.270

Review 9.  The long and the short of it: RNA-directed chromatin asymmetry in mammalian X-chromosome inactivation.

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Review 10.  The Polycomb complex PRC2 and its mark in life.

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  6 in total

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Journal:  Chromosome Res       Date:  2013-12       Impact factor: 5.239

2.  A new approach for detecting riboswitches in DNA sequences.

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3.  MEG3 long noncoding RNA regulates the TGF-β pathway genes through formation of RNA-DNA triplex structures.

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Journal:  Nat Commun       Date:  2015-07-24       Impact factor: 14.919

4.  Global DNA methylation profiling reveals new insights into epigenetically deregulated protein coding and long noncoding RNAs in CLL.

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Journal:  Clin Epigenetics       Date:  2016-10-12       Impact factor: 6.551

5.  Coding potential of circRNAs: new discoveries and challenges.

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Journal:  PeerJ       Date:  2021-01-18       Impact factor: 2.984

Review 6.  The role and mechanism of noncoding RNAs in regulation of metabolic reprogramming in hepatocellular carcinoma.

Authors:  Wenwei Liao; Jinpeng Du; Zhen Wang; Qingbo Feng; Mingheng Liao; Huixian Liu; Kefei Yuan; Yong Zeng
Journal:  Int J Cancer       Date:  2022-05-11       Impact factor: 7.316

  6 in total

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