Literature DB >> 24166399

Preparation of pea (Pisum sativum L.) chromosome and nucleus suspensions from single root tips.

G Gualberti1, J Doležel, J Macas, S Lucretti.   

Abstract

A high-yield method for the isolation of intact nuclei and chromosomes in suspension from a variable number of pea root tips (1-10) has been developed. This procedure is based on a two-step cell-cycle synchronization of root-tip meristems to obtain a high mitotic index, followed by formaldehyde fixation and mechanical isolation of chromosomes and nuclei by homogenization. In the explant, up to 50% of metaphases were induced through a synchronization of the cell cycle at the G1/S interface with hydroxyurea (1.25 mM), followed, after a 3-h release, by a block in metaphase with amiprophos-methyl (10 μM). The quality and quantity of nuclei and chromosomes were related to the extent of the fixation. Best results were obtained after a 30-min fixation with 2% and 4% formaldehyde for nuclei and chromosomes, respectively. The method described here allowed the isolation of nuclei and chromosomes, even from a single root tip, with a yield of 1×10(5)/root and 1.4×10(5)/root, respectively. Isolated suspensions were suitable for flow cytometric analysis and sorting and PRINS labelling with a rDNA probe.

Entities:  

Year:  1996        PMID: 24166399     DOI: 10.1007/BF00226097

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  15 in total

1.  Linkage maps in pea.

Authors:  T H Ellis; L Turner; R P Hellens; D Lee; C L Harker; C Enard; C Domoney; D R Davies
Journal:  Genetics       Date:  1992-03       Impact factor: 4.562

2.  Degenerate oligonucleotide-primed PCR: general amplification of target DNA by a single degenerate primer.

Authors:  H Telenius; N P Carter; C E Bebb; M Nordenskjöld; B A Ponder; A Tunnacliffe
Journal:  Genomics       Date:  1992-07       Impact factor: 5.736

3.  High-resolution flow karyotyping and chromosome sorting in Vicia faba lines with standard and reconstructed karyotypes.

Authors:  J Doležel; S Lucretti
Journal:  Theor Appl Genet       Date:  1995-05       Impact factor: 5.699

4.  Flow-cytometric characterization and sorting of plant chromosomes.

Authors:  A M de Laat; J Blaas
Journal:  Theor Appl Genet       Date:  1984-03       Impact factor: 5.699

5.  A high-yield procedure for isolation of metaphase chromosomes from root tips of Vicia faba L.

Authors:  J Doležel; J Cíhalíková; S Lucretti
Journal:  Planta       Date:  1992-08       Impact factor: 4.116

6.  Primer-induced labeling of pea and field bean chromosomes in situ and in suspension.

Authors:  J Macas; J Dolezel; G Gualberti; U Pich; I Schubert; S Lucretti
Journal:  Biotechniques       Date:  1995-09       Impact factor: 1.993

7.  Chromosome 2-specific DNA clones from flow-sorted chromosomes of tomato.

Authors:  K Arumuganathan; G B Martin; H Telenius; S D Tanksley; E D Earle
Journal:  Mol Gen Genet       Date:  1994-03

8.  Localization of seed protein genes on flow-sorted field bean chromosomes.

Authors:  J Macas; J Dolezel; S Lucretti; U Pich; A Meister; J Fuchs; I Schubert
Journal:  Chromosome Res       Date:  1993-07       Impact factor: 5.239

9.  Oligonucleotide-priming methods for the chromosome-specific labelling of alpha satellite DNA in situ.

Authors:  J E Koch; S Kølvraa; K B Petersen; N Gregersen; L Bolund
Journal:  Chromosoma       Date:  1989-10       Impact factor: 4.316

10.  Flow karyotyping and sorting of Vicia faba chromosomes.

Authors:  S Lucretti; J Doležel; I Schubert; J Fuchs
Journal:  Theor Appl Genet       Date:  1993-02       Impact factor: 5.699

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  14 in total

1.  Microarray-based survey of repetitive genomic sequences in Vicia spp.

Authors:  M Nouzová; P Neumann; A Navrátilová; D W Galbraith; J Macas
Journal:  Plant Mol Biol       Date:  2001-01       Impact factor: 4.076

2.  Chromosome sorting and PCR-based physical mapping in pea (Pisum sativum L.).

Authors:  Pavel Neumann; Dana Pozárková; Jan Vrána; Jaroslav Dolezel; Jirí Macas
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

3.  Karyotype analysis of four Vicia species using in situ hybridization with repetitive sequences.

Authors:  Alice Navrátilová; Pavel Neumann; Jirí Macas
Journal:  Ann Bot       Date:  2003-06       Impact factor: 4.357

Review 4.  Flow cytogenetics and plant genome mapping.

Authors:  Jaroslav Dolezel; Marie Kubaláková; Jan Bartos; Jirí Macas
Journal:  Chromosome Res       Date:  2004       Impact factor: 5.239

5.  PIGY, a new plant envelope-class LTR retrotransposon.

Authors:  Pavel Neumann; Dana Pozárková; Andrea Koblízková; Jirí Macas
Journal:  Mol Genet Genomics       Date:  2005-01-25       Impact factor: 3.291

6.  Perturbation of polyamine catabolism can strongly affect root development and xylem differentiation.

Authors:  Alessandra Tisi; Rodolfo Federico; Sandra Moreno; Sergio Lucretti; Panagiotis N Moschou; Kalliopi A Roubelakis-Angelakis; Riccardo Angelini; Alessandra Cona
Journal:  Plant Physiol       Date:  2011-07-11       Impact factor: 8.340

7.  Flow karyotyping and sorting of mitotic chromosomes of barley (Hordeum vulgare L.).

Authors:  M A Lysák; J Cíhalíková; M Kubaláková; H Simková; G Künzel; J Dolezel
Journal:  Chromosome Res       Date:  1999       Impact factor: 5.239

8.  Significant expansion of Vicia pannonica genome size mediated by amplification of a single type of giant retroelement.

Authors:  Pavel Neumann; Andrea Koblízková; Alice Navrátilová; Jirí Macas
Journal:  Genetics       Date:  2006-04-03       Impact factor: 4.562

9.  Development of flow cytogenetics and physical genome mapping in chickpea (Cicer arietinum L.).

Authors:  K Vlácilová; D Ohri; J Vrána; J Cíhalíková; M Kubaláková; G Kahl; J Dolezel
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

Review 10.  Chromosomes in the flow to simplify genome analysis.

Authors:  Jaroslav Doležel; Jan Vrána; Jan Safář; Jan Bartoš; Marie Kubaláková; Hana Simková
Journal:  Funct Integr Genomics       Date:  2012-08-16       Impact factor: 3.410

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